| Literature DB >> 35163883 |
Anne Kokel1, Dora Kadish1, Béla Török1.
Abstract
The chemo/regioselective H-D exchange of amino acids and synthetic building blocks by an environmentally benign Pd/C-Al-D2O catalytic system is described. Due to the importance of isotope labeled compounds in medicinal chemistry and structural biology, notably their use as improved drug candidates and biological probes, the efficient and selective deuteration methods are of great interest. The approach is based on selective H-D exchange reactions where the deuterium source is simple D2O. D2 gas is generated in situ from the reaction of aluminum and D2O, while the commercially available palladium catalyst assists the H-D exchange reaction. The high selectivity and efficiency, as well as the simplicity and safe nature of the procedure make this method an environmentally benign alternative to current alternatives.Entities:
Keywords: H/D exchange; Pd-Al combination; green chemistry; heterogeneous catalysis; in situ deuterium gas formation
Year: 2022 PMID: 35163883 PMCID: PMC8840159 DOI: 10.3390/molecules27030614
Source DB: PubMed Journal: Molecules ISSN: 1420-3049 Impact factor: 4.411
Figure 1Structure of tetrabenazine-d6.
Figure 2Volume of D2 produced as a function of time using various amount of Al at 80 °C (oil bath). The aluminum powder was mixed with 1.5 mL of D2O and was presonicated for 1 h before the measurement. The grey horizontal line indicates the formation of 1 mmol D2 for easier comparison.
Optimization of the reaction conditions for the H-D exchange using phenylalanine as a model substrate a.
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| 1 | 80 | 1 | MW | 55 | 55 | 20 | 0 | 0 |
| 2 | 80 | 1 | MW b | 0 | 0 | 0 | 0 | 0 |
| 3 | 80 | 24 | CH | 100 | 100 | 75 | 0 | 15 |
| 4 | 100 | 1 | MW | 75 | 75 | 30 | 0 | 0 |
| 5 | 120 | 1 | MW | 100 | 100 | 100 | 0 | 0 |
| 6 | 120 | 0.5 | MW | 100 | 100 | 100 | 0 | 0 |
| 7 | 120 | 1 | MW c | 100 | 100 | 100 | 0 | 0 |
| 8 | 120 | 0.5 | MW d | 35 | 35 | 0 | 0 | 0 |
a Reaction conditions: 0.3mmol of substrate, 20 mg of 5% Pd/C, 100 mg of Al powder in 1.5 mL of D2O. 1 h of presonication of the catalytic mixture (Pd/C-Al in D2O) before adding the substrate and irradiating the mixture under microwaves. Note: Three control reactions (1) without Pd and Al, (2) without Pd, and (3) without Al were carried out, and none of them yielded any H-D exchange; b reaction without presonication of the catalyst mixture; c reaction with 25 mg Al d reaction with 10 mg of Pd/C; e determined by 1H NMR (see Supplementary Materials, Figures S4–S9).
Figure 3(a) 1H NMR spectrum of phenylalanine; (b) 1H NMR spectrum of d2-phenylalanine; (c) 2H NMR spectrum of d2-phenylalanine (the signal in (a,b) at 1.8 ppm belongs to the standard.).
Synthesis of deuterium labeled compounds via H-D exchange reactions by Pd/C-Al-D2O system a.
| Entry | Product | Time (min) | T (°C) | Conversion b,c (%) | ED d (%) |
|---|---|---|---|---|---|
| 1 |
| 30 | 120 | 100 | >99 |
| 2 |
| 60 | 170 | 90 | 90 |
| 3 |
| 20 | 120 | 95 | 95 |
| 4 |
| 60 | 190 | 60 | 60 |
| 5 |
| 20 | 60 | 100 | >99 |
| 6 |
| 60 | 120 | 100 | >99 |
| 7 |
| 60 | 80 | 80 | 80 |
| 8 |
| 60 | 100 | 100 | >99 |
| 9 |
| 60 | 80 | 80 | 80 |
| 10 |
| 60 | 120 | 100 | DA: 76 |
a Reaction conditions: 0.3 mmol of substrate, 3% of Pd/C, 100 mg of Al powder in 1.5 mL of D2O (25 mg of aluminum afforded similar results with a few percent drop of yield for some substrates—see Supplementary Materials, Figures S10–S21. Reaction was carried out under microwave after 1 h of presonication of the catalytic mixture; b determined by NMR (see Supplementary Materials, Figures S12–S14); c The isolated yields in each case were >99%, essentially recovering the starting material in a D-enriched form; d Deuterium enrichment.
Figure 4The proposed mechanism of the H-D exchange (A–E) (the atomic orbitals for Pd and 2H are for illustration only and not to scale).
Figure 5Yield (conversion × selectivity) of H-D exchange of phenylalanine to phenylalanine-d2 after reusing the same catalytic mixture (partially oxidized Al powder and Pd/C) replenished with fresh Al (25 mg) before each cycle for four consecutive cycles.