| Literature DB >> 35154957 |
Abstract
Chlorpheniramine maleate, a widely used over-the-counter antihistamine, has been identified as a structural analog of aminoquinolines known to possess antiviral activity against the Betacoronavirus severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) that causes coronavirus disease 2019 (COVID-19). Structural similarities include the chlorophenyl group, pyridine ring, alkyl sidechain, and terminal tertiary amine; the comparison of aqueous energy-minimized structures indicates significant three-dimensional similarity as well. Preliminary clinical evidence supports these conclusions. The present study suggests that chlorpheniramine possesses antiviral activity against COVID-19.Entities:
Keywords: antiviral agents; chlorpheniramine maleate; clinical findings; covid-19; molecular modeling; sars-cov-2
Year: 2022 PMID: 35154957 PMCID: PMC8820487 DOI: 10.7759/cureus.20980
Source DB: PubMed Journal: Cureus ISSN: 2168-8184
Drug Structures Similar to Chloroquine *
* Screened from 13,580 drugs by chemical similarity with chloroquine structure at Threshold = 0.35, molecular weight > 200 g/mol, and Drug Types = Approved, Veterinary Approved, and Nutraceuticals. Drug class abbreviations: AM = antimalarial, AS = antiseptic, AB = antibiotic, AC = antineoplastic, N = neuroactive, AF = antifungal, AV = antiemetic, NS = NSAIDs (non-steroidal anti-inflammatories), CV = cardiovascular drugs, AH = antihistamines, AA = anti-asthmatics, AI = anti-inflammatories, AR = antirheumatics, and AE = anesthetics; NCNPP = N-Cyclohexyl-N'-phenyl-p-phenylenediamine
| DrugBank Database Structural Match (class) | Score | DrugBank Database Structural Match (class) | Score |
| Hydroxychloroquine (AM) | 0.950 | Chlorpheniramine (AH) | 0.377 |
| Amodiaquine (AM) | 0.565 | Montelukast (AA) | 0.376 |
| Primaquine (AM) | 0.519 | Orbifloxacin (AB) | 0.376 |
| Dequalinium (AS) | 0.483 | Tofacitinib (AR) | 0.376 |
| Chlorquinaldol (AS) | 0.473 | Brimonidine (AI) | 0.372 |
| Proflavine (AB) | 0.466 | Erlotinib (AC) | 0.371 |
| Cabozantinib (AC) | 0.438 | Thenalidine (AH) | 0.369 |
| Dacomitinib (AC) | 0.429 | Sarafloxacin (AB) | 0.368 |
| Chloroxine (AB) | 0.428 | Difloxacin (AB) | 0.368 |
| Danofloxacin (AB) | 0.419 | Pefloxacin (AB) | 0.367 |
| Cariprazine (N) | 0.419 | Norfloxacin (AB) | 0.367 |
| Besifloxacin (AB) | 0.414 | Mepivacaine (AE) | 0.365 |
| Gefitinib (AC) | 0.411 | Degarelix (AC) | 0.363 |
| Tafenoquine (AM) | 0.409 | Ropivacaine (AE) | 0.363 |
| Clioquinol (AF) | 0.401 | Bupivacaine (AE) | 0.363 |
| Lenvatinib (AC) | 0.399 | Levobupivacaine (AE) | 0.363 |
| NCNPP | 0.397 | Pergolide (N) | 0.362 |
| Domperidone (AV) | 0.396 | Mefloquine (AM) | 0.362 |
| Antrafenine (NS) | 0.394 | Boscalid (AF) | 0.362 |
| Sertindole (N) | 0.391 | Clomipramine (N) | 0.361 |
| Bosutinib (AC) | 0.389 | Floctafenine (AI) | 0.360 |
| Lomefloxacin (AB) | 0.389 | Vandetanib (AC) | 0.359 |
| Clofazimine (AB) | 0.387 | Tropisetron (N) | 0.359 |
| Sparfloxacin (AB) | 0.387 | Glasdegib (AC) | 0.358 |
| Grepafloxacin (AB) | 0.385 | Periciazine (AE) | 0.356 |
| Neratinib (AC) | 0.385 | Clobazam (N) | 0.355 |
| Amsacrine (AC) | 0.383 | Bazedoxifene (AC) | 0.355 |
| Quinupramine (N) | 0.382 | Finafloxacin (AB) | 0.355 |
| Pradofloxacin (AB) | 0.380 | Bendamustine (AC) | 0.354 |
| Afatinib (AC) | 0.379 | Etidocaine (AE) | 0.354 |
| Ciprofloxacin (AB) | 0.379 | Trazodone (N) | 0.354 |
| Enrofloxacin (AB) | 0.379 | Carprofen (NS) | 0.354 |
| Brexpiprazole (AB) | 0.379 | Alectinib (AC) | 0.353 |
| Imiquimod (AC) | 0.378 | Delafloxacin (AB) | 0.350 |
| Indoramin (CV) | 0.378 | Dexchlorpheniramine maleate (AH) | 0.350 |
| Fentanyl (N) | 0.377 | Lapatinib (AC) | 0.350 |
Drug Structures Similar to Hydroxychloroquine *&
* Screened from 13,580 drugs by chemical similarity with hydroxychloroquine structure at Threshold = 0.35, molecular weight > 200 g/mol, and Drug Types = Approved, Veterinary Approved, and Nutraceuticals. Drug class abbreviations: AM = antimalarial, AS = antiseptic, AB = antibiotic, AC = antineoplastic, N = neuroactive, AF = antifungal, AV = antiemetic, NS = NSAIDs (non-steroidal anti-inflammatories), CV = cardiovascular drugs, AH = antihistamines, AA = anti-asthmatics, AI = anti-inflammatories, AR = antirheumatics, and AE = anesthetics; AT = antithrombotic
& 13 differences with respect to the search with chloroquine are indicated as italic entries
| DrugBank Database Structural Match (class) | Score | DrugBank Database Structural Match (class) | Score |
| Chloroquine (AM) | 0.950 | Pefloxacin (AB) | 0.381 |
| Amodiaquine (AM) | 0.564 | Norfloxacin (AB) | 0.381 |
| Primaquine (AM) | 0.529 | Bazedoxifene (AC) | 0.381 |
| Chlorquinaldol (AS) | 0.493 | Indoramin (CV) | 0.381 |
| Dequalinium (AS) | 0.474 | Erlotinib (AC) | 0.380 |
| Proflavine (AB) | 0.443 | Fentanyl (N) | 0.380 |
| Chloroxine (AB) | 0.440 | Boscalid (AF) | 0.379 |
| Gefitinib (AC) | 0.439 | Remifentanil (AE) | 0.378 |
| Dacomitinib (AC) | 0.436 | Dipyridamole (AT) | 0.378 |
| Danofloxacin (AB) | 0.433 | Tofacitinib (AR) | 0.378 |
| Besifloxacin (AB) | 0.426 | Sufentanil (AE) | 0.378 |
| Antrafenine (NS) | 0.423 | Alectinib (AC) | 0.377 |
| Bosutinib (AC) | 0.415 | Mepivacaine (AE) | 0.376 |
| Cariprazine (N) | 0.413 | Finafloxacin (AB) | 0.376 |
| Lenvatinib (AC) | 0.407 | Ropivacaine (AE) | 0.374 |
| Clioquinol (AF) | 0.404 | Bupivacaine (AE) | 0.374 |
| Lomefloxacin (AB) | 0.403 | Levobupivacaine (AE) | 0.374 |
| Sparfloxacin (AB) | 0.400 | Imiquimod (AC) | 0.374 |
| Grepafloxacin (AB) | 0.398 | Carprofen (NS) | 0.373 |
| Afatinib (AC) | 0.398 | Bendamustine (AC) | 0.372 |
| Domperidone (AV) | 0.398 | Chlorpheniramine (AH) | 0.371 |
| Montelukast (AA) | 0.396 | Perphenazine (N) | 0.371 |
| Orbifloxacin (AB) | 0.394 | Cetrorelix (H) | 0.370 |
| Ciprofloxacin (AB) | 0.393 | Diperodon (AE) | 0.370 |
| Enrofloxacin (AB) | 0.393 | Halofuginone (AS) | 0.370 |
| Sertindole (N) | 0.393 | Vandetanib (AC) | 0.368 |
| Pradofloxacin (AB) | 0.392 | Pindolol (CV) | 0.367 |
| Clofazimine (AB) | 0.389 | Periciazine (AE) | 0.366 |
| Floctafenine (AI) | 0.389 | Trimetrexate (AC) | 0.366 |
| Mefloquine (AM) | 0.389 | Etidocaine (AE) | 0.366 |
| Brexpiprazole (AB) | 0.387 | Thenalidine (AH) | 0.364 |
| Amsacrine (AC) | 0.386 | Vismodegib (AC) | 0.364 |
| Sarafloxacin (AB) | 0.383 | Alfuzosin (AC) | 0.363 |
| Difloxacin (AB) | 0.383 | Carfentanil (N) | 0.363 |
| Brimonidine (AI) | 0.382 | Lapatinib (AC) | 0.363 |
| Tropisetron (N) | 0.382 | Trazodone (N) | 0.362 |
Figure 1Comparison of Chlorpheniramine structure with those of Chloroquine and Hydroxychloroquine
Common structural features are indicated by colored ovals: chlorophenyl group (green), pyridine ring (orange), alkyl sidechain (black), and tertiary amine (purple). * = chiral carbons.
Properties of Final Drugs Under Study *
* Data were obtained from PubChem.com, DrugBank.com, and the present work. The first molecular weight column is for the free base form of the drugs; the second is for the molecular weight of the maleate salt for the chlorpheniramine compounds. Log(P)ow refers to the octanol:water partition coefficient.
| Drug | CAS Number | DrugBank code | MW (g/mol) | MW (maleate) | log(P)OW | H2O Solubility (mg/L) | pKa |
| Chloroquine | 54-05-7 | DB00608 | 319.18 | - | 4.63 | 0.14 | 10.1 |
| Hydroxychloroquine | 118-42-3 | DB01611 | 335.18 | - | 3.87 | 0.026 | 9.67 |
| Chlorpheniramine | 132-22-9 | DB01114 | 274.79 | 390.14 | 3.38 | 160 | 9.13 |
| Dexchlopheniramine | 25523-97-1 | DB09555 | 274.79 | 390.14 | 3.39 | >100 | 9.33 |
Figure 2Aligned three-dimensional structures of Chloroquine, Hydroxychloroquine, and Chlorpheniramine
Energy-minimized structures of R-chloroquine, R-hydroxychloroquine, and S-chlorpheniramine are shown with silver bonds; crystal structures of S-chloroquine (CDMQUI), R-hydroxychloroquine sulfate (QOBHUL), and R-chlorpheniramine maleate (JEGWUN) are shown with black bonds. Color coding for atoms: carbon, black; nitrogen, blue; hydrogen, white; chlorine, green; oxygen, red; sulfur, yellow.
a. R-Chloroquine: energy minimized (front) aligned with the crystal structure. b. R-Hydroxychloroquine: energy minimized (front) aligned with the crystal structure. c. S-Chlorpheniramine: energy-minimized structure aligned with R-chlorpheniramine crystal structure (front). d. R-Chloroquine, R-hydroxychloroquine, and S-chlorpheniramine (front) aqueous energy-minimized structures aligned.