| Literature DB >> 35154355 |
Wenyu Xing1,2, Chao He3, Jiawei Li4,5, Wei Qin6, Minglei Yang7, Guannan Li8, Qingli Li8, Dean Ta1,2,9, Gaofeng Wei10, Wenfang Li3, Jiangang Chen6,8.
Abstract
Coronavirus disease 2019 (COVID-19) pneumonia has erupted worldwide, causing massive population deaths and huge economic losses. In clinic, lung ultrasound (LUS) plays an important role in the auxiliary diagnosis of COVID-19 pneumonia. However, the lack of medical resources leads to the low using efficiency of the LUS, to address this problem, a novel automated LUS scoring system for evaluating COVID-19 pneumonia based on the two-stage cascaded deep learning model was proposed in this paper. 18,330 LUS images collected from 26 COVID-19 pneumonia patients were successfully assigned scores by two experienced doctors according to the designed four-level scoring standard for training the model. At the first stage, we made a secondary selection of these scored images through five ResNet-50 models and five-fold cross validation to obtain the available 12,949 LUS images which were highly relevant to the initial scoring results. At the second stage, three deep learning models including ResNet-50, Vgg-19, and GoogLeNet were formed the cascaded scored model and trained using the new dataset, whose predictive result was obtained by the voting mechanism. In addition, 1000 LUS images collected another 5 COVID-19 pneumonia patients were employed to test the model. Experiments results showed that the automated LUS scoring model was evaluated in terms of accuracy, sensitivity, specificity, and F1-score, being 96.1%, 96.3%, 98.8%, and 96.1%, respectively. They proved the proposed two-stage cascaded deep learning model could automatically score an LUS image, which has great potential for application to the clinics on various occasions.Entities:
Keywords: Automated scoring; COVID-19 pneumonia; Cascaded model; Deep learning; LUS
Year: 2022 PMID: 35154355 PMCID: PMC8818345 DOI: 10.1016/j.bspc.2022.103561
Source DB: PubMed Journal: Biomed Signal Process Control ISSN: 1746-8094 Impact factor: 3.880
Patient statistics data.
| Indicators | Value |
|---|---|
| Number of patients tested by CT | 31 |
| Number of patients tested by RT-PCR | 31 |
| Age | 55 ± 21 |
| Height/cm | 168 ± 13 |
| Weight/kg | 70 ± 18 |
| Pulse/bpm | 84 ± 26 |
| Blood pressure/mmHg | 128/72 ± 23/19 |
| Oxygen saturation/% | 96 ± 4 |
Fig. 1Schematic representation of the twelve acquisition areas on chest.
Fig. 2Schematic diagram of automated LUS scoring system.
Fig. 3Four lung ultrasound patterns according to the scoring standard. (a) Score 0, (b) Score 1, (c) Score 2, (d) Score 3.
Fig. 4Procedure of LUSS assignment.
Fig. 5Schematic diagram of ResNet-50 CNN model.
Fig. 6Schematic diagram of transfer learning.
Training parameters of classification network.
| Parameter | Value |
|---|---|
| Iterations | 2000 |
| Batch size | 4 |
| Learning rate | 0.001 |
| L2 regularization | 0.0001 |
| Momentum | 0.9 |
| Loss function | |
| Frame | Matlab 2019b |
Fig. 7(a) Training process and (b) loss value of the first five ResNet-50 models.
Experimental results of the first stage.
| Score | Accuracy of testing set/% | ||||
|---|---|---|---|---|---|
| 1 | 2 | 3 | 4 | 5 | |
| Score 0 | 92.90 | 84.79 | 91.08 | 65.72 | 95.74 |
| Score 1 | 83.19 | 86.34 | 96.53 | 92.99 | 94.75 |
| Score 2 | 55.03 | 87.47 | 64.37 | 83.78 | 57.74 |
| Score 3 | 98.90 | 94.41 | 99.21 | 95.30 | 99.69 |
| Average | 82.51 | 88.25 | 87.80 | 84.45 | 86.98 |
| 85.99 | |||||
Experimental results of the first stage.
| Score | Number of correct samples in each experiment | ||||
|---|---|---|---|---|---|
| 1 | 2 | 3 | 4 | 5 | |
| Score 0 | 952 | 547 | 779 | 358 | 878 |
| Score 1 | 711 | 850 | 694 | 1002 | 985 |
| Score 2 | 316 | 469 | 566 | 386 | 102 |
| Score 3 | 586 | 717 | 715 | 679 | 657 |
| Sum | 2565 | 2583 | 2754 | 2425 | 2622 |
| 12,949 | |||||
Fig. 8Training process of (a) ResNet-50, (b) Vgg-19, and (c) GoogLeNet model.
Experiment results of the final scoring model.
| Model | Training accuracy/% | Testing accuracy/% | ||||
|---|---|---|---|---|---|---|
| Score 0 | Score 1 | Score 2 | Score 3 | Average | ||
| ResNet-50 | 94.09 | 82.4 | 93.2 | 76.4 | 99.2 | 87.8 |
| Vgg-19 | 99.12 | 97.6 | 96.0 | 86.4 | 99.6 | 94.9 |
| GoogLeNet | 98.85 | 88.4 | 98.8 | 85.2 | 98.8 | 92.8 |
Fig. 9Comparison of different models.
Fig. 10Confusion matrix of (a) Score 0, (b) Score 1, (c) Score 2, and (d) Score 3.
Evaluation of the final automated scoring model.
| Index | ||||
|---|---|---|---|---|
| Score 0 | 95.6 | 95.2 | 98.6 | 95.4 |
| Score 1 | 99.2 | 96.5 | 99.7 | 97.8 |
| Score 2 | 89.6 | 97.4 | 96.8 | 93.3 |
| Score 3 | 100.0 | 96.2 | 100.0 | 98.0 |
| Average | 96.1 | 96.3 | 98.8 | 96.1 |
Fig. 11Comparison with different methods. 1-Chen et al., 2-Average of first stage, 3-ResNet-50 (initial dataset), 4-Vgg-19 (initial dataset), 5-GoogLeNet (initial dataset), 6-Voting mechanism (initial dataset), 7-ResNet-50 (re-selected dataset), 8-Vgg-19 (re-selected dataset), 9-GoogLeNet (re-selected dataset), 10-Ours.