| Literature DB >> 35153659 |
Shouchao Wang1, Feng Xiao1, Wenbo Sun1, Chao Yang2, Chao Ma2, Yong Huang3, Dan Xu1, Lanqing Li1, Jun Chen4, Huan Li1, Haibo Xu1.
Abstract
PURPOSE: This study aimed to develop a radiomics signature for the preoperative prognosis prediction of isocitrate dehydrogenase (IDH)-wild-type glioblastoma (GBM) patients and to provide personalized assistance in the clinical decision-making for different patients.Entities:
Keywords: MRI; glioblastoma; isocitrate dehydrogenase wildtype; nomogram; radiomics
Year: 2022 PMID: 35153659 PMCID: PMC8833841 DOI: 10.3389/fnins.2021.791776
Source DB: PubMed Journal: Front Neurosci ISSN: 1662-453X Impact factor: 4.677
Clinical and traditional imaging characteristics of patients included in the study.
| Characteristics | All subjects ( | Training set ( | Test set ( | |
|
| ||||
| Age (years), | 58.72 ± 11.74 | 58.28 ± 10.86 | 59.76 ± 13.69 | 0.535 |
| Gender, | 0.870 | |||
| Male | 86 (60.56) | 61 (61) | 25 (59.52) | |
| Female | 56 (39.44) | 39 (39) | 17 (40.48) | |
| KPS, median (range) | 80 (40–100) | 80 (40–100) | 80 (40–100) | |
| Treatment, | 0.802 | |||
| Standard | 120 (84.51) | 85 (85) | 35 (83.33) | |
| Non-standard | 22 (15.49) | 15 (15) | 7 (16.67) | |
|
| ||||
| Location, | 0.061 | |||
| Frontal | 61 (42.96) | 45 (45) | 16 (38.10) | |
| Temporal | 39 (27.46) | 27 (27) | 12 (28.57) | |
| Parietal | 23 (16.20) | 11 (11) | 12 (28.57) | |
| Occipital | 5 (3.52) | 5 (5) | 0 (0) | |
| Others | 14 (9.86) | 12 (12) | 2 (4.76) | |
| Number, | 0.741 | |||
| Single | 109 (76.76) | 76 (76) | 33 (78.57) | |
| Multiple | 33 (23.24) | 24 (24) | 9 (21.43) | |
| Tumor crossing the midline, | 0.582 | |||
| Yes | 17 (11.97) | 11 (11) | 6 (14.29) | |
| No | 125 (88.03) | 89 (89) | 36 (85.71) | |
| Maximum tumor diameter, mean ± SD | 48.67 ± 16.33 | 49.77 ± 16.79 | 46.08 ± 15.05 | 0.202 |
| Maximum edema diameter, mean ± SD | 18.46 ± 10.55 | 18.99 ± 10.24 | 17.19 ± 10.28 | 0.377 |
| PTE, | 0.465 | |||
| Minor, <1cm | 38 (26.76) | 25 (25) | 13 (30.95) | |
| Major, ≥1cm | 104 (73.24) | 75 (75) | 29 (69.05) | |
| Edema shape, | 0.513 | |||
| Rounded | 65 (45.77) | 44 (44) | 21 (50.00) | |
| Irregular | 77 (54.23) | 56 (56) | 21 (50.00) | |
| Edema diameter/tumor diameter, mean ± SD | 0.43 ± 0.33 | 0.44 ± 0.36 | 0.39 ± 0.24 | 0.274 |
| Necrosis, | 0.744 | |||
| No | 14 (9.86) | 9 (9) | 5 (11.90) | |
| Mild | 61 (42.96) | 42 (42) | 19 (45.24) | |
| Severe | 67 (47.18) | 49 (49) | 18 (42.86) | |
| Cyst, | 0.700 | |||
| No | 83 (58.45) | 57 (57) | 26 (61.90) | |
| Small | 30 (21.13) | 23 (23) | 7 (16.67) | |
| Large | 29 (20.42) | 20 (20) | 9 (21.43) | |
| Enhancement, | 0.815 | |||
| Not marked | 63 (44.37) | 45 (45) | 18 (42.86) | |
| Marked | 79 (55.63) | 55 (55) | 24 (57.14) | |
| OS, median (range) | 306 (17–1,185) | 296 (23–1,185) | 322 (17–1,143) | |
OS, overall survival.
FIGURE 1Data flowchart of the study. (A) Module of the clinical characteristic analysis. (B) Module of the radiomics analysis.
Univariate analysis of the clinical and traditional imaging factors with the overall survival (OS) of patients using Cox regression model.
| Factors | HR | 95% CI | |
| Age | 1.024 | 1.001–1.048 | 0.038 |
| Gender | 1.064 | 0.697–1.623 | 0.774 |
| KPS | 0.987 | 0.976–0.998 | 0.021 |
| Treatment | 0.708 | 0.442–1.134 | 0.151 |
| Location | 0.749 | 0.326–1.191 | 0.277 |
| Number | 1.18 | 0.778–1.788 | 0.436 |
| Tumor crossing the midline | 2.417 | 1.42–4.11 | 0.001 |
| Maximum tumor diameter | 1.017 | 1.005–1.029 | 0.007 |
| Maximum edema diameter | 0.996 | 0.979–1.013 | 0.626 |
| PTE | 0.896 | 0.604–1.327 | 0.583 |
| Edema shape | 1.069 | 0.753–1.518 | 0.708 |
| Edema/tumor diameter | 0.706 | 0.397–1.255 | 0.236 |
| Necrosis | 0.961 | 0.613–1.740 | 0.897 |
| Cyst | 1.108 | 0.717–1.484 | 0.815 |
| Enhancement | 0.942 | 0.663–1.337 | 0.737 |
PTE, peritumoral edema. *p < 0.05.
FIGURE 2An example of region of interest (ROI) and the segmentation results of the MRI images of one patient. (A,B) Cross-section views of images before segmentation (A) and after manual segmentation (B). The lesion in the original image was high and showed a bright signal (A), and the ROI of the lesion area is represented as red after segmentation (B).
FIGURE 3Construction of the radiomics signature using least absolute shrinkage and selection operator (LASSO) Cox regression. (A) An optimal tuning parameter (λ) in the LASSO regression model was selected using fivefold cross-validation and the partial likelihood deviance rule. Two vertical dashed lines were drawn for two criteria: (1) the minimum of the partial likelihood deviance (lambda.min, red dashed) and the least feature number in the range of 1 standard error around lambda.min (lambda.1SE, black dashed). In this study, lambda.min (0.1035244) was selected to minimize the partial likelihood deviance. (B) LASSO coefficient profiles of the features. According to the fivefold cross-validation in panel (A), the optimal λ value was determined at lambda.min, and the corresponding features with non-zero coefficients were included in the construction of the radiomics signature.
Features and their corresponding coefficients in the radiomics signature.
| Feature category | Feature name | Coefficients | |
| Radiomics | Contrast | C_ShortRunEmphasis_ AllDirection_offset4_SD | –0.102 |
| T2 | T2_ClusterShade_AllDirection_ offset1_SD | –0.099 | |
| T2_ClusterShade_AllDirection_ offset7_SD | –0.073 | ||
| T2_Correlation_angle45_ offset7 | 0.059 | ||
| T2_sumAverage | –0.047 | ||
| T2_Elongation | –0.198 | ||
| FLAIR | FLAIR_Elongation | 0.001 | |
| FLAIR_IntensityVariability | 0.256 |
FLAIR, fluid-attenuated inversion recovery.
FIGURE 4Strata: index for risk stratification. Kaplan–Meier analysis of the overall survival (OS) of patients based on the radiomics model with optimal cutoff values (1.2311) in the training set (A) and the test set (B) and based on the Radiomics + Clinical model with optimal cutoff values (1.1489) in the training set (C) and the test set (D).
Comparison of the predictive performance of the models using the C-index in the training and test sets.
| Model | C-index (95%CI) | |
| Training set | Test set | |
| Radiomics | 0.803 (0.744–0.861) | 0.764 (0.680–0.848) |
| Radiomics + Clinical | 0.836 (0.785–0.886) | 0.799 (0.720–0.878) |
FIGURE 5Radiomics nomogram. (A) Radiomics + Clinical nomogram constructed by integrating the independent risk factors, including age, Karnofsky performance status (KPS), maximum tumor diameter, tumor crossing the midline, and radscore to predict the 1- and 2-year survival of patients with isocitrate dehydrogenase (IDH)-wild-type glioblastoma (GBM). (B,C) Calibration curves used to assess the prediction consistency of the nomogram in the training set (B) and the test set (C).