Pierre-Andre Cazade1, Vivek Verma2, Benjamin K Hodnett2, Damien Thompson1. 1. Department of Physics and the Synthesis and Solid State Pharmaceutical Centre, Bernal Institute, University of Limerick, Limerick V94 T9PX, Ireland. 2. Department of Chemical Sciences and the Synthesis and Solid State Pharmaceutical Centre, Bernal Institute, University of Limerick, Limerick V94 T9PX, Ireland.
Abstract
Monte Carlo (MC) and molecular dynamics (MD) computer simulations were used to investigate the role of adsorption during seeded and heterogeneous crystallization. The simulations characterized the range of adsorption energies and configurations encountered during adsorption of individual molecules of active pharmaceutical ingredients (APIs), with varying hydrogen-bonding tendencies, onto seed and heterosurfaces. Specifically, the adsorption of acetaminophen (AAP), carbamazepine (CBMZ), fenofibrate (FF), phenylbutazone (PBZ), clozapine (CPB), and risperidone (RIS) was simulated on selected crystallographic facets of their own crystals as examples of seeded crystallizations and on lactose or microcrystalline cellulose (MCC) substrates as heterosurfaces. The MC screening provided adsorption enthalpies in the range of -59 to -155 kJ mol-1 for these APIs on lactose, generally increasing as the molar mass of the API increased. The corresponding values predicted for adsorption of each API onto its own crystal were in the range of -92 to -201 kJ mol-1. More detailed MD simulations performed in methanol showed adsorption free energies for RIS on MCC in the range of -37 to -50 kJ mol-1 with strong molecule-surface complexation lifetime of tens of nanoseconds on the (010) face of MCC. This extended lifetime is a key feature in understanding the mechanism of heterogeneous crystallization. A well-formed nucleus is generated on the surface starting with a single adsorbed molecule. Individual or small clusters add to the adsorbed species. This addition is facilitated by the extended lifetime of the adsorbed molecule, which is several orders of magnitude greater than the time required for additional molecules to assemble and grow into a stable nucleus attached to the heterosurface.
Monte Carlo (MC) and molecular dynamics (MD) computer simulations were used to investigate the role of adsorption during seeded and heterogeneous crystallization. The simulations characterized the range of adsorption energies and configurations encountered during adsorption of individual molecules of active pharmaceutical ingredients (APIs), with varying hydrogen-bonding tendencies, onto seed and heterosurfaces. Specifically, the adsorption of acetaminophen (AAP), carbamazepine (CBMZ), fenofibrate (FF), phenylbutazone (PBZ), clozapine (CPB), and risperidone (RIS) was simulated on selected crystallographic facets of their own crystals as examples of seeded crystallizations and on lactose or microcrystalline cellulose (MCC) substrates as heterosurfaces. The MC screening provided adsorption enthalpies in the range of -59 to -155 kJ mol-1 for these APIs on lactose, generally increasing as the molar mass of the API increased. The corresponding values predicted for adsorption of each API onto its own crystal were in the range of -92 to -201 kJ mol-1. More detailed MD simulations performed in methanol showed adsorption free energies for RIS on MCC in the range of -37 to -50 kJ mol-1 with strong molecule-surface complexation lifetime of tens of nanoseconds on the (010) face of MCC. This extended lifetime is a key feature in understanding the mechanism of heterogeneous crystallization. A well-formed nucleus is generated on the surface starting with a single adsorbed molecule. Individual or small clusters add to the adsorbed species. This addition is facilitated by the extended lifetime of the adsorbed molecule, which is several orders of magnitude greater than the time required for additional molecules to assemble and grow into a stable nucleus attached to the heterosurface.
Heterogeneous nucleation
is the process in which crystallization
is initiated by the interaction of gas phase or solute molecules with
foreign solids (not seed). Heterogeneous nucleation is ubiquitous
in the natural environment and is, for example, associated with ice
nucleation in the atmosphere. Mineral dust particles are thought to
be the most prevalent ice nucleation particles (INPs). Heterogeneous
nucleation of ice seems to be particularly important in circumstances
where supersaturation is low. Two mechanisms are commonly cited, immersion
and contact freezing. In immersion, INPs induce freezing inside a
water droplet, whereas contact freezing occurs on the surface of the
droplet.[1]The subject of heterogeneous
nucleation for organic molecules was
put on a modern scientific footing by Ward and co-workers.[2−4] They used freshly cleaved single crystals such as β-succinic
acid or l-valine as substrates for the nucleation of benzoic
acid delivered to the substrate by sublimation. This work led to the
concept of ledge-directed epitaxy (LDE) where the nucleation site
was postulated to be a pair of intersecting cleavage planes on the
substrate, which generated a good lattice match with the nucleating
benzoic acid.[2]Subsequently, the
subject has expanded to include compounds and
conditions that are more interesting for pharmaceutical applications.[5] The assembly of the molecules on heterosurfaces
may occur through interactions such as functional group matching,[6] lattice matching,[6] or through nonspecific adsorption of the molecules on the heterosurface.[7] Self-assembled monolayers,[8−10] silanized glass
substrates,[11−13] pharmaceutical excipients,[6,14−16] biocompatible polymers,[17,18] synthetic polymers,[19−24] and porous substrates[25] have been used
as heterosurfaces to induce nucleation. Chemically modified surfaces
have also been used for protein crystallization.[26] There are several examples in the literature of stable
phases nucleating on the surface of metastable phases during solution-mediated
polymorphic transformations.[27−30]Of specific interest for the current study
is the report by Diao
et al.[31] that examined the nucleation density
of aspirin on a range of polymers. Two polymers, in particular, poly(4-acryloylmorpholine)
and poly(2-carboxyethyl acrylate), showed a dramatic increase in nucleation
density. This is because the hydrogen bond donor (HBD) sites of the
aspirin could interact most effectively with the hydrogen bond acceptor
(HBA) sites on these polymers. In addition, the (011) facet of aspirin,
which features free carboxylic acid terminations, always attached
to the surface of these polymers in a clearly orientated manner.Diao et al.[32] also engineered pores
in polymers of differing shapes (round, square, and hexagonal) generating
different angles between the pore walls. Polymers with hexagonal pores
accelerated the crystallization of aspirin more than square or round
pores because of a favorable matching between the pore wall angles
and the faces of the nucleating compound. While porosity greatly accelerated
the nucleation rate in polymers that already possessed the requisite
complementary HBA properties, porosity was not effective for polymers
that did not possess HBA capacity.Heterogeneous nucleation
of acetaminophen (AAP) has received a
lot of attention. Substrates studied include poly(methylmethacrylate)
(PMMA), poly-n-butylmethacrylate (PBMA), δ-mannitol,
α-lactose monohydrate, graphite, and l-histidine.[6,33] Aspects investigated include the hydrogen-bonding complementarity
between AAP and the substrate and the role of lattice matching. Both
were considered important but the role of hydrogen bonding was considered
more important. Graphite was a particularly interesting heterosurface
as it was among the poorest in accelerating heterogeneous nucleation.[6,33]In a study by Arribas Bueno et al.,[15] fenofibrate (FF) was examined because it does not contain any groups
capable of acting as HBD sites. Its crystallization from methanol
was carried out in the presence of α/β-lactose (α/β-Lac),
δ-mannitol (d-Man), microcrystalline cellulose (MCC),
carboxymethyl cellulose (CMC), silica (SiO2), and poly(caprolactone)
(PCL). Each of these excipients except PCL features multiple HBDs,
and all but PCL were effective in strongly reducing the FF induction
time. In this work, the authors suggested that adsorbed compounds
attached to a heterosurface exhibit a much longer lifetime than the
corresponding compounds attached to each other in the solution phase.
The significance of the longer lifetime of adsorbed compounds is that
it allows sufficient time for multiple molecules of the same compound
to interact with and become attached to the adsorbed molecule or a
developing nucleus.A further study by Verma et al.[34] examined
the acceleration of the crystallization of seven APIs in the presence
of a single excipient, microcrystalline cellulose (MCC), which features
multiple HBD groups. Five of the compounds, caffeine (CAF), phenylbutazone
(PBZ), risperidone (RIS), clozapine (CPB), and fenofibrate (FF), exhibit
HBA properties only. The remaining two, acetaminophen (AAP) and carbamazepine
(CBMZ), exhibit both HBD and HBA properties. Crystallization of the
five APIs with HBA functionality only was strongly accelerated when
MCC was present during the crystallization (up to 16 times faster),
whereas the two compounds with HBA and HBD properties exhibited a
much more modest acceleration (less than ×2) for the same conditions.
Scanning electron microscopy (SEM) analysis of the API–MCC
composite powders confirmed that all API particles attached to the
MCC carrier particles. This study confirmed the benefits of hydrogen-bonding
complementary (HBD in the excipient and HBA in the APIs in this study)
but a key finding was the degree of attachment of AAP and CBMZ to
the excipient. This feature was identified as an important argument
for the extended lifetime of adsorbed compounds, created from the
adsorption of single molecules or small clusters, allowing sufficient
time for other API molecules to interact and coalesce into stable
nuclei that remained attached to the heterosurface and eventually
grew into fully stable crystals.The field of adsorption is
also of interest in developing a theory
of heterogeneous nucleation. Traditionally, this field has concentrated
on the adsorption of small molecules such as CO, NO, and H2O onto metals (e.g., Pt, Ni) and metal oxides (e.g., SiO2, Al2O3, MgO,
and many others).[35−37] Of particular interest for the present study is the
recent work that examines the adsorption of small organic molecules
onto metal oxide surfaces. These reports typically combine infrared
spectroscopy and temperature-programmed desorption studies with molecular
simulations to determine adsorption configurations, enthalpies of
adsorption, and, in some cases, adsorption lifetimes. In one representative
example, the adsorption of α-pinene onto fused silica was studied,[38] with the calculated enthalpy of adsorption of
−39 kJ mol–1 and the free energy of adsorption
of −22 kJ mol–1. Molecular dynamics (MD)
studies indicated that limonene adsorbed onto silica in several possible
configurations, most of which exhibited one π-hydrogen bond
to the silica surface.[39] For limonene on
SiO2, the enthalpy of adsorption was −55 kJ mol–1 and the free energy of adsorption was −30
kJ mol–1. These values are entirely consistent with
the desorption energies in the range of −31 to −47 kJ
mol–1 reported for a range of substituted benzene
compounds (toluene, iodobenzene, chlorobenzene, etc.) on silica.[40] A more general and comprehensive
compilation of enthalpies of adsorption, principally for hydrocarbons
and alcohols onto a range of metal oxides, showed that values were
typically between −50 and −150 kJ mol–1, generally increasing as the molecular size increased.[41] Recent MD modeling studies have quantified the
roles of solvation and heterostructure in determining the strength
of the binding free energies of a variety of molecule–substrate
complexes.[42,43]Here, we systematically
probe the nature of the interactions between
a heterosurface and a range of API molecules, some of which feature
HBD and HBA properties and some HBA properties only. The approach
was to treat the first nucleation interactions between an API and
a heterosurface as an adsorption phenomenon. The adsorption properties
of the full range of APIs tested experimentally in ref (34) were screened using the
Monte Carlo (MC) method to generate adsorption complexes and estimate
binding enthalpies for each API on a lactose substrate selected for
its abundance of HBD sites on each Miller surface. Lactose was an
effective surface in promoting heteronucleation in our previous work.[14−16] The MC method returned multiple low-energy adsorption configurations
(generally >10) for each API adsorbed on lactose. The rapid MC
screen
was complemented by detailed molecular dynamics (MD) simulations of
a selected API–excipient combination from ref (34) namely, RIS adsorbed onto
methanol-solvated microcrystalline cellulose (MCC). Both of the excipients
examined here are commonly used in pharmaceutical formulations and
are sometimes used as a blend.[44]
Methods
The Monte Carlo method[45,46] was applied as a screening
tool to generate adsorption configurations and enthalpies for a range
of APIs on a model lactose surface. Six APIs were selected for this
study. AAP and CBMZ possess both HBD and HBA functional groups, while
FF, PBZ, CPB, and RIS only possess HBA functional groups. Since methanol
was the only solvent used in ref (34) its adsorption onto lactose was also evaluated
using the MC method. Including the solvent provides a more accurate
model of the binding process and the competition that can exist with
solvation. A recent study of the crystallization of salicylic acid
in a range of solvents suggests that nucleation becomes more difficult
as the binding between the solvent and the solute becomes stronger.[47]MC simulations were carried out using
the adsorption locator module
of Materials Studio Version 7.0. Crystal structures were generated
from the CCDC database with the aid of the Mercury Software 2020.1.
In a first step, the required adsorbate (API or solvent) was drawn
and its geometry optimized using the Forcite Compass II force field.
Electrostatic and van der Waals (vdW) interactions were truncated
at their default 1.25 nm cutoffs to enable high-throughput screening.
The required adsorbent structures were selected from the CCDC database.
Miller planes were selected based on the most prominent BFDH areas
identified by the Bravais, Friedel, Donnay, and Harker crystal morphology
method in the Mercury software. The adsorbent model was created from
a 64-unit supercell of the crystal structure with the unit cells generally
arranged in an 8 × 4 × 2 array in the abc directions with the selected Miller plane exposed to a vacuum slab
of 1.5 nm. To facilitate broad and rapid screening, explicit bulk
methanol solvent molecules were not included in the model. The calculation
of adsorption configurations with the lowest adsorption energies (Eads) was carried out using the adsorption locator
module with the Compass II force field for both the geometry optimization
and the adsorption energy calculations. This force field has been
successfully used in the past for small drug molecules.[34,46]Adsorption locator generates adsorption configurations via MC searches of the configurational space of the adsorbate–adsorbent
complexes with simulated annealing used to slowly lower the temperature
and identify the most stable binding sites. A fraction of the exposed
crystal structure was selected as the target to which adsorption was
confined. The maximum allowed adsorption distance was set at 0.5 nm.
The simulated annealing calculation was performed over 4 heating cycles
with 5000 steps per cycle. For each simulation, this number of loading
steps was confirmed as sufficient for the energy optimization.Each calculation returned a number of adsorption configurations
and an estimate of the Eads for each configuration.
The 10 configurations with the lowest Eads values were selected for each adsorbate–adsorbent complex
and examined in detail to identify if there was a hydrogen-bonding
component of the total adsorption energy. Note that neither COMPASS
nor CHARMM (see below) force fields retain a specific interaction
potential dedicated to hydrogen bonding, distinct from other sources
of electrostatic and van der Waals’s interactions.To
benchmark the reliability of the high-throughput MC screens,
larger-scale molecular dynamics (MD) simulations were performed on
a representative adsorbate–adsorbent complex in full explicit
solvent. The simulation cell contained a single RIS molecule bound
to an MCC particle surrounded by 9891 methanol molecules, in a periodic
box that reproduced the bulk density of methanol at an ambient temperature
and pressure. We used the Gromacs 2018.4 code to calculate dynamics.
The CHARMM[48] force field for carbohydrates
was used to model MCC and its complementary generalized force field
for small organic molecules GGenFF[49] was
used to model methanol and RIS, with RIS parameterized using the ParamChem
server. Two standard force fields are commonly used for the modeling
of small organic molecules including APIs: CGenFF that was developed
to be compatible with the CHARMM force field and GAFF, which was developed
to be compatible with the AMBER force field. Both CHARMM and AMBER
were initially developed for the modeling of proteins in solution
but have since been extended to the modeling of DNA/RNA, lipids, and
carbohydrates. Having access to reliable models for sugars has been
crucial in selecting a force field, as most excipients are sugar-based.All bonds to hydrogen were constrained using the LINCS[50] algorithm, which allowed an integration time
step of 2 fs. The MD trajectory was calculated using the leapfrog
integrator,[51] and coordinates were saved
every 2 ps. Long-range electrostatics were treated by the particle
mesh Ewald (PME) method, which calculates all electrostatic interactions
in the periodic simulation cell.[52] The
standard truncation in the CHARMM of 1.2 nm was used for vdW interactions.All systems were minimized for 10 000 steps and heated progressively
from 0 to 300 K for a total of 0.5 ns at a constant volume–temperature
(NVT), followed by 0.5 ns of a constant pressure (NPT) equilibration.
The reference temperature was set at 300 K with a time constant of
1 ps, and the reference pressure was set at 1 bar with a time constant
of 5 ps, using the Berendsen[53] thermostat
and barostat, respectively. Following thermalization and equilibration,
the subsequent production phase of dynamics (in which the total energy,
temperature, and pressure have plateaued and properties can be estimated)
was carried out in the NPT ensemble. The reference pressure was set
at 1 bar with a time constant of 5 ps using the Parrinello–Rahman
barostat,[54,55] and all molecules coupled separately in
groups to an external heat bath were set at 300 K with a coupling
time constant of 1 ps using the v-rescale[56] method. All analyses were performed with Gromacs tools, and trajectories
were visualized using visual molecular dynamics (VMD),[57] a standard software for preparation, visualization,
and analysis of MD simulations.We simulated the adsorption
of RIS on different faces of a block
of methanol-solvated MCC. In all simulations, the RIS molecule is
initially positioned and oriented in a binding orientation conducive
to strong hydrogen bonding with each heterosurface.
Results
Table shows the
chemical structure of the six API molecules examined in this study,
together with a summary of the numbers of hydrogen bond donor (HBD)
and hydrogen bond acceptor (HBA) groups in each molecule. HBA and
HBD sites in the APIs were identified and counted using the hydrogen
bond propensity module of the Mercury 2020.1 code. AAP, CPB, and CBMZ
each possess HBD and HBA groups, whereas RIS, PBZ, and FF possess
only HBA groups. As reported by Verma et al.,[16] the methanol solvent can competitively bind at the API–excipient
interface, e.g., blocking the only HBD site of CPB
to leave CPB with only HBAs to hydrogen-bond with lactose.
Table 1
Chemical Structures of the Six APIs
Used in This Study with the Number of Hydrogen Bond Donor (HBD) and
Hydrogen Bond Acceptor (HBA) Groups in Each Structure Shown
Table presents
the calculated Eads values for methanol
and AAP adsorbed from the gas phase onto the indicated cleavage planes
of lactose. Lactose was selected as the adsorbate because of its extensive
use as an excipient and the large concentration of HBD groups on each
of its cleavage planes.
Table 2
Adsorption Energies
for Methanol and
AAP on Various Lactose Planes (CCDC Code BLACTO)a
lactose (hkl)
BFDH relative
area
Eads methanol/kJ mol–1
Eads AAP/kJ mol–1
(100)
0.296
–71 to −46
–125 to −105
(001)
0.130
–84 to −54
–163 to −142
(020)
0.108
–79 to −50
–159 to −130
(111)
<0.001
–79 to −50
–138 to −113
(110)
0.178
–67 to −46
–146 to −117
The range of Eads values spans the 10
lowest energy configurations.
The range of Eads values spans the 10
lowest energy configurations.All adsorption sites returned a significant Eads for methanol adsorbed onto all cleavage planes of lactose
examined (in the range of −46 to −84 kJ mol–1) and distinctly larger values for AAP adsorbed onto lactose (in
the range of −105 to −163 kJ mol–1). The Eads ranges returned are not strongly
affected by the lactose cleavage plane for methanol and AAP. The range
of values we report in Table (and in Table ) represents the 10 lowest Eads for 10
separate adsorption configurations for a particular API adsorbed onto
a specific crystallographic plane of lactose, indicating that these
ranges reflect the Boltzmann distribution (also called Gibbs distribution)
of adsorption configurations and enthalpies that are accessible to
each API on the excipient surface.
Table 3
Eads for
API onto Lactose (100), on a Selected Miller Plane of Its Own Structure
and for Methanol on the APIa
adsorbate
Eads API on lactose (100)/kJ mol–1
adsorbent
(hkl)
Eads API on the indicated
API (hkl)/kJ mol–1
Eads methanol on the
indicated API (hkl)/kJ mol–1
AAP
–125 to −105
AAP (110)
–105 to −79
–63 to −33
CBMZ
–79 to −59
CBMZ (01̅1)
–113 to −100
–54 to −38
FF
–109 to −96
FF (001)
–117 to −100
–33 to −22
PBZ
–100 to −96
PBZ (001)
–142 to −130
–46 to −25
CPB
–105 to −88
CLZ (110)
–113 to −96
–50 to −38
RIS
–155 to −142
RIS (101̅)
–201 to −188
–54 to −42
The range of Eads values spans the 10
lowest energy configurations.
The range of Eads values spans the 10
lowest energy configurations.The absolute values of these adsorption energies are sizable when
compared to the typical values of approximately −200 kJ mol–1 for chemisorption of small molecules onto metal surfaces.[58] They are also consistent with a recent experimental
and MD study of limonene on SiO2 that reports Eads values in the range of −50 to −60 kJ
mol–1 and an extensive review of small organic molecules
(hydrocarbons, alcohols, ketones, and carboxylic acids) adsorbed onto
a range of metal oxides with adsorption energies of −20 to
−150 kJ mol–1.[36,37,39,41]Figure presents some representative modes of adsorption of
methanol and AAP onto the indicated cleavage planes of lactose. All
modes of adsorption for methanol and AAP on lactose featured single
or multiple strong hydrogen bonds with lengths ≤0.25 nm, leading
to the conclusion that all lactose cleavage planes provide hydrogen-bonding
interaction sites for methanol and AAP.
Figure 1
Mode of adsorption of
(A) methanol onto lactose (100), (B) AAP
onto lactose (100), and (C) AAP onto lactose (110). The blue dotted
lines represent hydrogen bond contacts with a length less than 0.25
nm. For clarity in this figure and in Figures –6, the adsorbate
(API or solvent) is presented as a CPK ball-and-stick model and the
adsorbent is shown in thin-stick representation.
Mode of adsorption of
(A) methanol onto lactose (100), (B) AAP
onto lactose (100), and (C) AAP onto lactose (110). The blue dotted
lines represent hydrogen bond contacts with a length less than 0.25
nm. For clarity in this figure and in Figures –6, the adsorbate
(API or solvent) is presented as a CPK ball-and-stick model and the
adsorbent is shown in thin-stick representation.
Figure 2
Mode of adsorption of (A) CBMZ onto lactose (100) and
(B) CBMZ
onto CBMZ (0̑̑̑1̅1).
Figure 6
Mode of
adsorption of (A) risperidone onto lactose (100) and (B)
risperidone onto risperidone (101̅).
Table presents
the range of Eads values returned for
the six APIs on the (100) plane of lactose (column 2), which is its
largest BFDH fractional plane. Also given are the adsorption energies
for the six APIs adsorbed onto the largest BFDH fractional plane of
their own crystal structures (columns 3 and 4) and for the adsorption
of methanol onto the same plane of each of the six APIs (column 5).The results in column 2 of Table show that all of the APIs tested in this way demonstrate
strong adsorption on lactose (100) with adsorption energies entirely
consistent with literature reports.[36,37,39,41] In five of the six
cases studied, adsorption energies are slightly weaker on lactose
(100) than the corresponding energies for adsorption of these APIs
onto selected faces of their own crystal structures (column 4, Table ). A further feature
is that the Eads values for methanol on
the six selected faces of the API crystal structures were slightly
smaller than the Eads values for methanol
adsorbed onto the various planes of lactose (Table ).Further detailed investigation demonstrates
that hydrogen bonding
occurs between the selected APIs and lactose including those with
only HBA groups (Table ). Standard criteria are used to determine the number of H-bonds
between two species. The algorithm looks for donor and acceptor polar
atoms (N, O, S, F, and some C). To act as a donor, the atom must carry
a hydrogen atom. Then, a H-bond exists if the D–A distance
is <0.3 nm and the D–H–A angle is <20°. Our
simulations confirm that, as expected, there is no hydrogen bonding
for any API that only possesses HBA groups when adsorbed onto its
own crystal structure. This point is further illustrated in Figures –6. The top graphic in each figure
presents the lowest energy site for adsorption of the selected API
onto lactose (100). In each case, at least one H-bond can be identified
between the API and the lactose (100) surface. This finding was confirmed
for each of the 10 lowest energy adsorption sites for all of the APIs
listed in Table for
adsorption onto lactose. On the other hand, the analysis confirmed
that the APIs that do not possess HBD groups (FF, PBZ, and RIS) did
not exhibit any hydrogen bonding when adsorbed onto their own crystal
structure, as expected. Surprisingly, in the cases of CBMZ and CPB,
each of which possesses one HBD group, hydrogen bonding was not observed
when each molecule adsorbed onto the selected plane of its own crystal
structure. This indicates that hydrogen bonding is not essential for
crystal growth. It is known that a new secondary nucleus can develop
from the adsorbed state, especially through the crystal breeding mechanism.[59] Future works could systematically scan API molecule
adsorption on all energetically stable API crystal faces to further
map the potential energy surface for this self-interaction between
the molecule and seed.Mode of adsorption of (A) CBMZ onto lactose (100) and
(B) CBMZ
onto CBMZ (0̑̑̑1̅1).Mode of
adsorption of (A) fenofibrate onto lactose (100) and (B)
fenofibrate onto fenofibrate (001).Mode of
adsorption of (A) phenylbutazone onto lactose (100) and
(B) phenylbutazone onto phenylbutazone (100).Mode of
adsorption of (A) clozapine onto lactose (100) and (B)
clozapine onto clozapine (110).Mode of
adsorption of (A) risperidone onto lactose (100) and (B)
risperidone onto risperidone (101̅).In addition to lactose, microcrystalline cellulose (MCC) is another
promising candidate for adsorption of APIs as it presents potential
H-bond sites on many of its faces. We performed three series of MD
simulations with RIS placed initially within the binding distance
of different faces of MCC in bulk methanol (Figure ). In two of the simulations, for interaction
with the (100) and (001) faces of the crystal, RIS did not stick to
the surface. However, it bound strongly to the (010) face for tens
of nanoseconds of unconstrained well-equilibrated room-temperature
dynamics. Figure shows
the shortest distance between atoms of RIS and MCC during ∼30
ns of strong binding, confirming that the API remains within a close
hydrogen bond contact distance with MCC throughout. The movie in the Supporting Information shows that RIS maintains
a looser association with the surface for another ∼65 ns before
completely desorbing.
Figure 7
(a) Starting configuration of RIS on the (100) face of
MCC for
MD simulations in bulk methanol. MCC atoms are shown as thick sticks,
RIS as balls and sticks, and the explicit methanol bulk solvent molecules
are drawn as a semitransparent surface. Red balls/sticks represent
oxygen atoms, nitrogen atoms are navy blue, carbon atoms are green,
and hydrogen atoms are white. (b) Starting and (c) typical bound structure
during strong binding dynamics of RIS on the (010) face of microcrystalline
cellulose. Methanol solvent is not depicted for the sake of clarity.
Figure 8
Contact distance between RIS and the (010) face of MCC
in methanol
during the 32 ns of strong complexation.
(a) Starting configuration of RIS on the (100) face of
MCC for
MD simulations in bulk methanol. MCC atoms are shown as thick sticks,
RIS as balls and sticks, and the explicit methanol bulk solvent molecules
are drawn as a semitransparent surface. Red balls/sticks represent
oxygen atoms, nitrogen atoms are navy blue, carbon atoms are green,
and hydrogen atoms are white. (b) Starting and (c) typical bound structure
during strong binding dynamics of RIS on the (010) face of microcrystalline
cellulose. Methanol solvent is not depicted for the sake of clarity.Contact distance between RIS and the (010) face of MCC
in methanol
during the 32 ns of strong complexation.To further characterize the interaction between RIS and the (010)
face of MCC, we monitored the number of H-bonds over time. We compare
the RIS–MCC binding with the H-bonding between RIS and methanol
as the balance between adsorption and desorption is determined by
the competition between the API/substrate and the API/solvent interactions
(Figure ). On average,
RIS forms more H-bonds with methanol than with MCC. However, as the
simulation progresses, the number of H-bonds with methanol decreases
to stabilize between two and three, while the number of H-bonds with
cellulose increases to stabilize between one and two. Finally, the
number of H-bonds between RIS and methanol increases again, while
the number of H-bonds with cellulose decreases leading to the unbinding
of RIS. This finding emphasizes the importance of the choice of solvent
as well as maximizing API–excipient H-bonding in designing
heterogeneous crystallizations. Taken together, the data in Figures and 9 confirm that the RIS remains strongly bound via H-bonds to the excipient surface for the full 32 ns of strong binding
dynamics. The MD-calculated H-bound adsorption lifetime is consistent
with a recent study of water adsorption onto mesoporous silica. In
that work, lifetimes close to 20 ns were reported for adsorbed water.[37,39]
Figure 9
H-bond
population dynamics during 32 ns of strong binding between
RIS and MCC (black) and between RIS and methanol (red).
H-bond
population dynamics during 32 ns of strong binding between
RIS and MCC (black) and between RIS and methanol (red).Figure shows
the average lifetimes of the individual specific pairwise H-bonds
that RIS forms with cellulose and with methanol. The lifetimes are
similar, with H-bonds to cellulose slightly longer-lived than H-bonds
to methanol. The lifetime of the individual H-bonds is sub-10 ps,
which is typical of H-bonds in general, e.g., H-bonds
in liquid water exchange every 10 ps or so.[60,61] This emphasizes that the overall strong interaction is summed over
a large population of short-lived interactions. Biology uses similar
multisite or multivalent attachment of large molecules to receptor
surfaces through multiple, individually weak, reversible interactions.
This provides overall binding energies as strong as chemisorption,
yet the complexes can be dissociated by simply changing the pH, local
concentration of binding molecules, or solvent, avoiding the need
for harsh chemical treatments or the high temperatures required to
remove chemisorbed molecules.[62,63]
Figure 10
Individual pairwise
H-bond lifetimes for RIS–MCC (black)
and RIS–methanol (red).
Individual pairwise
H-bond lifetimes for RIS–MCC (black)
and RIS–methanol (red).Figure shows
how often a particular atom of RIS is closest to the MCC surface during
the 32 ns of strong binding. The oxygen atom of the ketone group (atom
37) is the most frequent closest contact (see also the movie in the SI, which demonstrates the dynamic nature of
the adsorption). The lone pairs of electrons make the R2C=O oxygen site an excellent H-bond acceptor.
In addition, an in-plane hydrogen atom of the piperidine ring (atom
27) is ideally situated to interact with cellulose whenever atom 37
interacts with the surface. Atoms 11 and 12, the oxygen and nitrogen
atoms of the 5-member ring also bind frequently to the MCC surface.
All of these atoms are found on the same side of the molecule, and
it is safe to assume that they constitute their binding face or “sticky”
patch. Figure shows
the total number of contacts between RIS and MCC within a given distance,
here 0.3 nm (black) and 0.4 nm (red).
Figure 11
Computed number of closest
contacts that each RIS atom makes with
MCC during 32 ns of strong binding dynamics. The inset shows a sketch
of RIS with the atoms numbered.
Figure 12
Total
number of contacts formed between RIS and MCC during 32 ns
of dynamics. The black line shows the number of contacts within 0.3
nm, while the red line shows the number of contacts within 0.4 nm.
Computed number of closest
contacts that each RIS atom makes with
MCC during 32 ns of strong binding dynamics. The inset shows a sketch
of RIS with the atoms numbered.Total
number of contacts formed between RIS and MCC during 32 ns
of dynamics. The black line shows the number of contacts within 0.3
nm, while the red line shows the number of contacts within 0.4 nm.Note that the contacts involve more than H-bonds.
They correspond
to pairs of atoms between the API and excipient in close proximity
to each other and susceptible to interact via both
electrostatic (polar atoms) and vdW intermolecular interactions. Figure and the SI movie show how many sites are actually involved
in the binding of such a molecule on MCC, beyond just HBA/HBD pairs.
In molecular simulations, H-bonds emerge due to intermolecular electrostatic
and vdW interactions when the hydrogen atom of a donor and the electronegative
atom such as fluorine, oxygen, or nitrogen of an acceptor adopt a
particular geometric configuration. For large-area contacts such as
typical API–excipient complexes, other atoms beyond the H-bond
pairs also interact by electrostatic, polarization, and vdW forces.
H-bonds are the strongest intermolecular interactions (together with
π–π stacking, where available between conjugated
rings on the API and surface) and will therefore generally direct
the orientation of the binding process. In particular, Figures and 12 show that RIS binds during the 32 ns with two modes involving a
different number of contacts. Due to the presence of many single bonds,
the rings can rotate with respect to each other.The most stable
conformation involves (in addition to the strongly
bound ketone group) HBA atoms 11 and 12 of the 5-membered ring, although
the ring may occasionally rotate away from the surface. The less stable
conformation (the minor population of ∼8 ns in duration, in
the interval of 17–25 ns in Figure ) sees the binding relying only on atoms
11 and 12, while the ring carrying the ketone group (atom 37) rotates
away from the surface. These binding dynamics can be observed in the
first 32 s of the movie of the MD trajectory provided in the SI (1
s playing time corresponds to 1 ns of dynamics). Hydrogen bonding via the ketone oxygen is also a regular feature of the adsorption
configurations identified using the Monto Carlo scan (e.g., Figure A), which
emphasizes its key role in stabilizing the API–excipient complex.Finally, the binding free energy of RIS on MCC was estimated using
the MM-PBSA (Poisson–Boltzmann) and MM-GBSA (generalized Born)
methods. Both methods confirmed the favorable binding of RIS on MCC.
The computed binding free energies of −50 and −39 kJ
mol–1, respectively, indicate strong binding, though
it is important to note that both approaches are known to overestimate
free energies. This is because bulk dielectric constants approximate
the full explicit solvent effect and the neglect or incomplete treatment
of entropy. Taking these factors into consideration, the estimates
are consistent with the 1–2 H-bonds of types C=O···HO
and (O or N)···HO with binding energies of ca. −25 kJ mol–1 each plus some
minor vdW contacts between the API and excipient.[64] The numbers are also consistent with those obtained using
the MC-based adsorption locator, given the differences in underlying
model physics, parameter sets, and the consideration of binding to
a large cellulose nanoparticle in methanol vs more
flexible lactose disaccharide surface in vacuum.
Discussion
This
study was undertaken to test the findings of ref (34). The data presented in
that work predicted that crystallization of a wide range of APIs (at
low to modest supersaturation) is accelerated in the presence of a
range of widely used excipients, all of which offer HBD sites. This
acceleration is most pronounced when the technique is applied to APIs
that do not themselves have HBD sites. The acceleration ranges from
4 to 16 times when the APIs without HBD capacities (listed in Table ) are crystallized
in the presence of MCC, compared to crystallization without an added
heterosurface for the same supersaturation.[9,10,34]The most significant finding from
the simulations reported here
is that the adsorption energies measured by the MC and MD methods
are entirely consistent with literature values for small organic molecules
generally adsorbed on metal oxides, in particular, silica surfaces.[36,38−41,65]The treatment then of the
first step in heterogeneous nucleation
as an adsorption process offers useful insight into the mechanism,
indicating that the binding free energies are very significant, predicted
by MD to be approximately −50 kJ mol–1. A
further point is that the adsorption energies for AAP adsorbed onto
all of the surfaces of lactose examined here were all similar in magnitude
(Table ; MC scans).
This indicates the primary importance of the chemical interaction,
rather than the exact surface crystallography in the case of lactose
with its abundance of HBD sites. This is also consistent with MD simulations,
which show that the adsorption of RIS was not favorable on several
of its surfaces, namely, (100) and (001), which lack the necessary
and complementary hydrogen-bonding groups. On the complementary (010)
surface of MCC, RIS makes strong, long-lived H-bonds and remains strongly
bound for tens of nanoseconds.The MC and MD simulations undertaken
for this work are complementary,
forming a neat workflow for rapid identification of possible binding
sites followed by a detailed examination of selected major population(s).
The adsorption locator module in the Materials Studio suite of programs
uses a Monte Carlo approach to rapidly scan and estimate the strength
of a broad range of adsorption modes. MC calculates thermodynamic
statistical probabilities of acceptance/rejection of moves. By contrast,
MD simulations generate a trajectory or time history of the system,
which is followed over a period. In our case, we monitored interactions
over 100 ns (strong binding persisted for ∼32 ns, followed
by looser association for a further ∼65 ns; Figure ). During the 32 ns of strong
association, thousands of individual adsorption configurations are
computed and these collectively can be used to estimate the adsorption
time for RIS attached to an MCC surface in the presence of solvent
molecules. The movie of the MD trajectory in the Supporting Information shows that the RIS molecule only completely
detaches from the MCC surface during the final few nanoseconds of
the 100 ns of dynamics. Instead of leaving after the ∼32 ns
of strong binding, the molecule tumbles through a variety of weakly
bound poses, which is consistent with the multiple adsorption configurations
identified from the Monte Carlo work.We also note that the
MC computed adsorption enthalpies for APIs
onto lactose vs onto their own crystal structures
were similar, perhaps demonstrating why the heterosurface has been
reported to behave almost as effectively as seed in accelerating crystallization.[34]There are fewer literature reports where
heterosurfaces without
HBDs were examined.[6,15,31] These were graphite and poly(caprolactone), neither of which generated
a significant acceleration of the crystallization process. The MD
simulations carried out here also indicate that HBD capacity in the
heterosurface is a prerequisite for adsorption of the API molecules
included in this study (which did not include APIs that exhibited
only HBA capacities). In addition, MD simulations showed zero binding
of RIS on the (100) and (001) surfaces of MCC, which all lack the
HBD functionality.From an adsorption theory perspective, the
adsorption lifetime
comes about because the Eads contributes
to the size of the activation energy for desorption, as illustrated
in Scheme . The adsorbed
state represents a deep energy well. Escape (desorption) involves
much higher activation energies than for the adsorption. The difference
between the activation energy for adsorption (Eact ads) and the activation energy for desorption (Eact des) is the adsorption energy (Eads). The lifetime (τ) of adsorbed species
is related to Eads by eq (37,39,66−69)
Scheme 1
Energetics
of Adsorption onto a Heterosurface
where τ0 is the lifetime of single molecular vibration.
Literature values for τ0 are typically in the range
of 10–12–10–17 s.[41,65] Using this approach, we can estimate lifetimes of the adsorbed APIs
(from the MC energies in Tables and 3) of 10–1–1014 s. Clearly, these values are unreasonable. Equation is usually applied
to simple molecules (often diatomic) with a single clearly defined
adsorption interaction. In the case of more complex molecules such
as those examined here, there are multiple electrostatic and vdW adsorption
interactions that collectively contribute to the overall Eads.An alternative approach is to take the adsorption
lifetime determined
for RIS on MCC determined from the MD simulation. Applying this value
(32 ns) to eq yields
an Eads of −25 kJ mol–1. This value is in the range associated with 1–2 H-bonds and
is approximately half the adsorption enthalpy of −55 kJ mol–1 calculated in MD simulations of limonene on SiO2.[39] This approach would indicate
that only the strongest binding interactions, namely, H-bonds, significantly
contribute to the adsorption lifetime.More generally, adsorption
energies like lattice energies are typically
made up of two components, namely, electrostatic and vdW interactions.
There are numerous examples where the vdW forces constitute the major
part of the lattice energy.[70,71] The individual components
of the overall vdW interactions are by definition tiny in size and
therefore transitory in nature. By the same calculation presented
above (eq ), individual
vdW interactions with energies less than 1 kJ mol–1 would return lifetimes on the order of a single molecular vibration
(10–12–10–13 s). However,
in the solid state, the time constant for translation would be many
orders of magnitude greater than the time constant for the switching
on and off of transient vdW forces. Therefore, in the context of the
solid state where the interacting compounds are not translationally
free, vdW forces become an important part of the total lattice energy.
Here, we argue that the vdW component of adsorption energies switches
on and off too quickly to affect translation or diffusion away from
a heterosurface and does not contribute to the lifetime of the adsorbed
species. This then leaves just the role of hydrogen bonding to be
explored, consistent with the growing experimental reports of heterocrystallization.[11−34]Central to our hypothesis on the action of heterosurfaces
is the
concept that adsorbed molecules have longer lifetimes (on the order
of tens of nanoseconds) than molecule-to-molecule interactions in
solution (on the order of picoseconds). Here, we present clear evidence
that we can expect API molecules adsorbed onto suitable heterosurfaces
to exhibit adsorption lifetimes in excess of 10 ns. In an earlier
publication, we estimated the time required to add a single molecule
of an API to a growing crystal to be on the order of 1–50 ps.[34] The simulation data we report here confirms
that a typical API adsorbed onto a typical heterosurface has a lifetime
that is several orders of magnitude longer than the time required
to add a single or multiple molecules or clusters of molecules of
the API to a growing nucleus or cluster.Our postulated mechanism
of heteronucleation involves the adsorption
of APIs onto sites on the heterosurface at which they remain attached
for an extended time scale (tens of nanoseconds). By contrast, the
time scale of API–API collisions in homogeneous solution leading
to homogeneous nucleation is of the order of tens of picoseconds,
limiting the time available for attachment of further API molecules.
When attached by adsorption to a heterosurface, the API molecule can
experience multiple collisions with other API molecules from solution,
some of which will also be aided by a favorable enthalpy of adsorption
and grow by multipole additions toward the formation of a critical
nucleus size. The growth to the critical nucleus size need not necessarily
be via the addition of single API molecules but may
also involve growth to the critical size by cluster addition to the
adsorbed API.[72]The total adsorption
energy then provides only a first approximation
of the lifetime of the adsorbed species. Of more importance is the
presence of strong hydrogen bonding between the heterosurface and
the API. In the absence of complementarity between HBD and HBA capacities
on the API and the heterosurface, strong hydrogen bonds are not formed
and the API rapidly dissociates from the heterosurface. Strong hydrogen
bonding anchors the API onto the heterosurface while allowing vibrational
motions and exchanges between equivalent hydrogen-bonding sites (without
unbinding) that may facilitate favorable positioning of additive molecules
or clusters from the crystallizing solution as the ordered, well-formed
nucleus assembles.
Conclusions
Atomistic computer simulations
of API molecules adsorbed on excipient
surfaces identified strong modes of adsorption and adsorption energies
entirely consistent with literature studies of the adsorption of small
organic molecules on metal oxide surfaces. The lifetime of APIs adsorbed
onto excipients in methanol solution has been determined most precisely
for RIS adsorbed onto MCC using MD simulations. The MD-calculated
hydrogen-bonded lifetime of 32 ns is long in comparison with the lifetime
of API–API collision and attachment in solution. It is orders
of magnitude longer than the time required for the addition of a single
molecule to a growing crystal at low to moderate levels of supersaturation.
A mechanism of heteronucleation is presented, whereby API molecules
attached to a heterosurface can experience multiple collisions during
tens of nanoseconds with API molecules or clusters from homogeneous
solution, sufficient to facilitate growth to a critical nucleus size.
This mechanism postulates that the extended lifetime of adsorbed API
is an essential feature of efficient, reproducible heteronucleation.