Literature DB >> 35129696

Sphingobacterium bovistauri sp. nov., Isolated from the Faeces of Bos Taurus.

Qiong Wang1, Zhi-Qin Fang1, Chen-Lu Zhang1, Jian-Qiang Shen2, Jian-Dong Lai3, Xiu-Lin Han4, Tao Lu5.   

Abstract

A novel bacterium designated WQ 366 T was isolated from the faeces of Bos taurus, foraging on the slopes of the Baima Snow Mountain in Yunnan, China. The isolate grew optimally at 30 ℃ and pH 7.0-8.0 without NaCl. The cells were Gram-stain-negative, aerobic, rod-shaped, non-gliding, catalase-positive, and produced yellow color colonies on Columbia Agar. A polyphasic study was applied to clarify its taxonomic position through 16S rRNA gene and genome sequence analysis, and other extensive biological typing. Phylogenetic analysis revealed that the isolate was affiliated to the genus Sphingobacterium and its 16S rRNA gene sequence was closely related to Sphingobacterium bovisgrunnientis YK2 T (97.3%), Sphingobacterium composti T5-12 T (96.4%), and Sphingobacterium cavernae 5.0403-2 T (96.4%). The calculated whole genome average nucleotide identity (ANI) and the digital DNA-DNA hybridization values between strain WQ 366 T and the three related strains were 78.3, 78.6, 73.9 and 21.2, 21.2, 21.0%, respectively. The predominant fatty acids (>10%) were iso-C15:0, iso-C17:0 3-OH, Summed Feature 3 (C16:1 ω7c and/or C16:1 ω6c), and Summed feature 9 (iso-C17:1 ω9c and 10-methyl C16:0). The main polar lipids were PE, GPL, GL, and PL. MK-7 was the major menaquinone. The genome size and the G + C content of WQ 366 T was 4.1 Mb and 34.6%, respectively. All these results indicated that strain WQ 366 T represents a novel species of the Sphingobacterium genus. Therefore, the name Sphingobacterium bovistauri sp. nov. is proposed, and the type strain is WQ 366 T (= CCTCC AA 2020029 T = KCTC 82395 T).
© 2022. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.

Entities:  

Mesh:

Substances:

Year:  2022        PMID: 35129696     DOI: 10.1007/s00284-022-02763-2

Source DB:  PubMed          Journal:  Curr Microbiol        ISSN: 0343-8651            Impact factor:   2.188


  16 in total

1.  Multiple sequence alignment with the Clustal series of programs.

Authors:  Ramu Chenna; Hideaki Sugawara; Tadashi Koike; Rodrigo Lopez; Toby J Gibson; Desmond G Higgins; Julie D Thompson
Journal:  Nucleic Acids Res       Date:  2003-07-01       Impact factor: 16.971

2.  [Recurrence of Guillain-Barré syndrome after 16 years].

Authors:  J Korohoda
Journal:  Pol Tyg Lek       Date:  1971-06-07

3.  Sphingobacterium chungjuense sp. nov., isolated from a freshwater lake.

Authors:  Jaeho Song; Yochan Joung; Shan-Hui Li; Juchan Hwang; Jang-Cheon Cho
Journal:  Int J Syst Evol Microbiol       Date:  2020-10-15       Impact factor: 2.747

4.  Methods for distinguishing gram-positive from gram-negative bacteria.

Authors:  G M Carlone; M J Valadez; M J Pickett
Journal:  J Clin Microbiol       Date:  1982-12       Impact factor: 5.948

5.  Seasonal cycling in the gut microbiome of the Hadza hunter-gatherers of Tanzania.

Authors:  Samuel A Smits; Jeff Leach; Erica D Sonnenburg; Carlos G Gonzalez; Joshua S Lichtman; Gregor Reid; Rob Knight; Alphaxard Manjurano; John Changalucha; Joshua E Elias; Maria Gloria Dominguez-Bello; Justin L Sonnenburg
Journal:  Science       Date:  2017-08-25       Impact factor: 47.728

6.  Sphingomonas corticis sp. nov., and Sphingobacterium corticibacterium sp. nov., from bark canker.

Authors:  Yong Li; Shengkun Wang; Ju-Pu Chang; Dan-Ran Bian; Li-Min Guo; Xu-Qi Yang
Journal:  Int J Syst Evol Microbiol       Date:  2020-09-14       Impact factor: 2.747

7.  Sphingobacterium bovisgrunnientis sp. nov., isolated from yak milk.

Authors:  Manpreet Kaur; Harjodh Singh; Shivani Sharma; Sunita Mishra; Naga Radha Srinivas Tanuku; Anil Kumar Pinnaka
Journal:  Int J Syst Evol Microbiol       Date:  2018-02       Impact factor: 2.747

8.  MEGA11: Molecular Evolutionary Genetics Analysis Version 11.

Authors:  Koichiro Tamura; Glen Stecher; Sudhir Kumar
Journal:  Mol Biol Evol       Date:  2021-06-25       Impact factor: 16.240

9.  Effects of domestication on the gut microbiota parallel those of human industrialization.

Authors:  Aspen T Reese; Katia S Chadaideh; Caroline E Diggins; Laura D Schell; Mark Beckel; Peggy Callahan; Roberta Ryan; Melissa Emery Thompson; Rachel N Carmody
Journal:  Elife       Date:  2021-03-23       Impact factor: 8.713

10.  Gut microbiome composition is associated with spatial structuring and social interactions in semi-feral Welsh Mountain ponies.

Authors:  Rachael E Antwis; Jessica M D Lea; Bryony Unwin; Susanne Shultz
Journal:  Microbiome       Date:  2018-11-22       Impact factor: 14.650

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.