Rabia Mehmood1, Amina Sadiq1, Reem I Alsantali2, Ehsan Ullah Mughal3, Meshari A Alsharif4, Nafeesa Naeem3, Asif Javid3, Munirah M Al-Rooqi4, Gul-E-Saba Chaudhry5,6, Saleh A Ahmed4,7. 1. Department of Chemistry, Govt. College Women University, Sialkot 51300, Pakistan. 2. Department of Pharmaceutical Chemistry, College of Pharmacy, Taif University, P.O. Box 11099, Taif 21944, Saudi Arabia. 3. Department of Chemistry, University of Gujrat, Gujrat 50700, Pakistan. 4. Department of Chemistry, Faculty of Applied Sciences, Umm Al-Qura University, Makkah 21955, Saudi Arabia. 5. Institute of Marine Biotechnology, Universiti Malaysia Terengganu, Kuala Nerus 21030, Terengganu, Malaysia. 6. Microbiology and Biotechnology Research Lab, Fatima Jinnah Women University, Rawalpindi 23451, Pakistan. 7. Department of Chemistry, Faculty of Science, Assiut University, Assiut 71516, Egypt.
Abstract
In the present work, a concise library of 1,3,5-triaryl-2-pyrazolines (2a-2q) was designed and synthesized by employing a multistep strategy, and the newly synthesized compounds were screened for their urease and α-glucosidase inhibitory activities. The compounds (2a-2q) were characterized using a combination of several spectroscopic techniques including FT-IR, 1H NMR, 13C NMR, and EI-MS. All the synthesized compounds, except compound 2i, were potent against urease as compared to the standard inhibitor thiourea (IC50 = 21.37 ± 0.26 μM). These analogs disclosed varying degrees of urease inhibitory activities ranging from 9.13 ± 0.25 to 18.42 ± 0.42 μM. Compounds 2b, 2g, 2m, and 2q having IC50 values of 9.36 ± 0.27, 9.13 ± 0.25, 9.18 ± 0.35, and 9.35 ± 0.35 μM, respectively, showed excellent inhibitory activity as compared to standard thiourea (IC50 = 21.37 ± 0.26 μM). A kinetic study of compound 2g revealed that compound 2g inhibited urease in a competitive mode. Among the synthesized pyrazolines, the compounds 2c, 2k, 2m, and 2o exhibited excellent α-glucosidase inhibitory activity with the lowest IC50 values of 212.52 ± 1.31, 237.26 ± 1.28, 138.35 ± 1.32, and 114.57 ± 1.35 μM, respectively, as compared to the standard acarbose (IC50 = 375.82 ± 1.76 μM). The compounds (2a-2q) showed α-glucosidase IC50 values in the range of 114.57 ± 1.35 to 462.94 ± 1.23 μM. Structure-activity relationship revealed that the size and electron-donating or -withdrawing effects of substituents influenced the activities, which led to the urease and α-glucosidase inhibiting properties. Compound 2m was a dual potent inhibitor against urease and α-glucosidase due to the presence of 2-CF3 electron-withdrawing functionality on the phenyl ring. To the best of our knowledge, these synthetic compounds were found to be the most potent dual inhibitors of urease and α-glucosidase with minimum IC50 values. The cytotoxicity of the compounds (2a-2q) was also investigated against human cell lines MCF-7 and HeLa. Compound 2l showed moderate cytotoxic activity against MCF-7 and HeLa cell lines. Moreover, in silico studies on most active compounds were also performed to understand the binding interaction of most active compounds with active sites of urease and α-glucosidase enzymes. Some compounds exhibited drug-like characteristics due to their lower cytotoxic and good ADME profiles.
In the present work, a concise library of 1,3,5-triaryl-2-pyrazolines (2a-2q) was designed and synthesized by employing a multistep strategy, and the newly synthesized compounds were screened for their urease and α-glucosidase inhibitory activities. The compounds (2a-2q) were characterized using a combination of several spectroscopic techniques including FT-IR, 1H NMR, 13C NMR, and EI-MS. All the synthesized compounds, except compound 2i, were potent against urease as compared to the standard inhibitor thiourea (IC50 = 21.37 ± 0.26 μM). These analogs disclosed varying degrees of urease inhibitory activities ranging from 9.13 ± 0.25 to 18.42 ± 0.42 μM. Compounds 2b, 2g, 2m, and 2q having IC50 values of 9.36 ± 0.27, 9.13 ± 0.25, 9.18 ± 0.35, and 9.35 ± 0.35 μM, respectively, showed excellent inhibitory activity as compared to standard thiourea (IC50 = 21.37 ± 0.26 μM). A kinetic study of compound 2g revealed that compound 2g inhibited urease in a competitive mode. Among the synthesized pyrazolines, the compounds 2c, 2k, 2m, and 2o exhibited excellent α-glucosidase inhibitory activity with the lowest IC50 values of 212.52 ± 1.31, 237.26 ± 1.28, 138.35 ± 1.32, and 114.57 ± 1.35 μM, respectively, as compared to the standard acarbose (IC50 = 375.82 ± 1.76 μM). The compounds (2a-2q) showed α-glucosidase IC50 values in the range of 114.57 ± 1.35 to 462.94 ± 1.23 μM. Structure-activity relationship revealed that the size and electron-donating or -withdrawing effects of substituents influenced the activities, which led to the urease and α-glucosidase inhibiting properties. Compound 2m was a dual potent inhibitor against urease and α-glucosidase due to the presence of 2-CF3 electron-withdrawing functionality on the phenyl ring. To the best of our knowledge, these synthetic compounds were found to be the most potent dual inhibitors of urease and α-glucosidase with minimum IC50 values. The cytotoxicity of the compounds (2a-2q) was also investigated against human cell lines MCF-7 and HeLa. Compound 2l showed moderate cytotoxic activity against MCF-7 and HeLa cell lines. Moreover, in silico studies on most active compounds were also performed to understand the binding interaction of most active compounds with active sites of urease and α-glucosidase enzymes. Some compounds exhibited drug-like characteristics due to their lower cytotoxic and good ADME profiles.
According to the contemporary research of drug discovery, enzyme
inhibition plays an important role in this field. Urease and α-glucosidase
are two imperative enzymes that are meticulously concomitant with
various clinical fields.[1,2] Urease (urea amidohydrolase,
EC 3.5.1.5, nickel-based) comes from the superfamily of phosphotriesterase
and amidohydrolase that initiates the hydrolysis of urea, eventually
leading to their conversion into ammonia and carbon dioxide. The urease
enzyme is widely spread from prokaryotes to eukaryotes. The urease
enzyme’s hyperactivity releases an excessive amount of ammonia
causing alkalinity in the stomach, consequently, enhancing the permeability
of the gastric mucosa.[3−10] Although humans lack the urease enzymes, urea is synthesized as
the end product of protein metabolism in them that is usually eliminated
from the body in the form of urine.[11−13] Action of urease enzymes
in cattle and many other animals also facilitates monitoring and regulating
their nitrogen metabolism.[14,15] Different pathogenic
conditions can arise due to the elevated levels of these enzymes,
especially, they assist in the flourishing of various bacterial infections,
leading to some grave adverse effects.[16] The growth of Helicobacter pylori (HP) is eased via the assistance of low pH of the stomach in humans,
eventually causing the peptic and gastric ulcers, finally leading
to cancer.[17−21] Moreover, various metabolic dysregulations can arise due to the
elevated level of ammonia abolishing the gastrointestinal tract (GIT)
epithelium.[22,23] Furthermore, kidney stone formation
is also instigated via a high urease level.[24]Excessive urease activity is generated in urea fertilization
leading
to intense environmental pollution ultimately causing major economic
losses.[25−30] This also leads to plant mutilation by controlling the intake of
necessary nutrients, enhancing the soil pH and secondary ammonia toxicity.[31,32] Thus, it is pivotal to distinguish new urease inhibitors with enhanced
stability, prominent bioavailability, increased selectivity, extraordinary
potency, and least toxicity.[33−37]Diabetes mellitus (DM) is a prolonged metabolic disorder caused
by hyperglycemia.[38] Diabetes mellitus metabolic
disease gives rise to solemn health disorders, for instance cardiovascular
disorders, nephropathy, retinopathy, amputations, neuropathy, cancer,
and reduced ability of wound healing. The control of glycemia is an
illustrious method to cure diabetes mellitus.[39−43] α-Glucosidase is a significant enzyme present
on the epithelial wall of the small intestine that is involved in
carbohydrate metabolism, and the inhibition of this enzyme lowers
the glucose level in the blood facilitating the treatment of DM.[44,45] Many detrimental effects such as gastrointestinal diseases, flatulence,
and diarrhea are associated with typical available clinical drugs
such as voglibose, miglitol, and acarbose.[46,47] The inhibition of α-glucosidase via these inhibitors lowers
the absorption of glucose that is released from the pancreas and salivary
glands for the conversion of oligosaccharides into simple sugar via
hydrolysis, consequently, lowering the postprandial blood glucose
level, which is a beneficial approach to cure diabetes.[48,49]Subsequently, because of the use of pyrazoline in the organic
field
due to its considerable bioavailability, it has always been interesting
to design facile, effective, and eco-friendly methodologies for the
synthesis of pyrazoline.[50,51]Generally, a
combination therapy is recommended for patients suffering
from diabetes mellitus and peptic ulcer simultaneously. As diabetic
patients show slow healing ability, peptic ulcer can cause various
health problems tallying the damage of diabetes mellitus itself. Therefore,
the combined urease and α-glucosidase inhibition could be an
ideal therapeutic approach for patients who are suffering from both
DM and peptic ulcer simultaneously (Figure ).[52−54]
Figure 1
Some identified representative motifs
already reported in the literature.
Some identified representative motifs
already reported in the literature.Despite the important efforts made in the research, the management
of malignancies in humans is still a major challenge in contemporary
medicinal chemistry. Unfortunately, the significant toxicity exerted
by most of the anticancer agents and the development of cellular drug
resistance remain the primary hurdle for effective chemotherapy.[55,56] Cancer is the second most fatal disease liable for ∼21% annual
deaths globally.[57] The malignant neoplastic
disease is mainly caused by uncontrolled cell growth, metastasis,
and invasion. Cancer cells proliferate quickly and their inhibition
is most vital within the treatment of cancer exploiting metastatic
tumor compounds.[58] The difficulties in
the diagnosis of the disease at the earliest stages, slender therapeutic
indices of therapeutic agents, and, therefore, the development of
multidrug resistance lead to a number of key obstacles, making cancer
treatment complex and causing a high death rate worldwide.[59,60] On the other hand, pyrazole-containing compounds have received considerable
attention owing to their diverse chemotherapeutic potential including
versatile antineoplastic activities. In addition, it was found that
the introduction of a pyrazole nucleus between two aryl rings of chalcones
played an integral role in increasing the cytotoxic potential.[61]Recently, pyrazoline has been conferred
as one of the most valuable
heterocyclic scaffolds in medicinal chemistry on account of its wide
spectrum in clinical drugs.[54] It has been
emerged as the most privileged source to design various synthons for
drug synthesis (Figure ). This class contains structure-targeting compounds in different
fields such as synthetic and medicinal chemistry exhibiting a good
affinity for various biotargets of heterocyclic compounds of this
class.[62−64] These scaffolds were utilized in the advancement
of drug research and agricultural products.[65] The pyrazolinic scaffolds also show a variety of applications in
pharmacology due to their exceptional antioxidant, anti-inflammatory,
antifungal, analgesic, antipyretic, antibacterial, antiangiogenic,
antiviral, and antitumoral activities.[66−68]
Figure 2
Structural framework
of a versatile heterocycle (1,3,5-triaryl-2-pyrazoline).
Structural framework
of a versatile heterocycle (1,3,5-triaryl-2-pyrazoline).Presently, our research group focusing on the designing of
facile
synthetic approaches of small compounds and exploring their potential
biological activity.[69−76] In recent years, pyrazolinic compounds have been drawing massive
attention of our research group due to their remarkable inhibitory
effects against urease and α-glucosidase enzymes.Encouraged
by the biological significance of pyrazoline structural
motifs in the medicinal chemistry, herein, we report the synthesis,
characterization, and biological evaluation of new pyrazoline derivatives
as dual inhibitors of urease and α-glucosidase enzymes. The
synthesized pyrazoline compounds with different substitution patterns
were evaluated for their urease and α-glucosidase inhibitory
activities, and these analogs were assessed, remarkably, to be the
potent heterocyclic class among the already reported urease inhibitors.
Furthermore, the synthesized compounds were investigated using cytotoxic
and molecular modeling studies.
Results
and Discussion
Chemistry
The
title analogs (2a–2q) were synthesized from easily
available and
simple precursors as shown in Scheme . The first step involves a base-catalyzed condensation
of 2′-hydroxyacetophenone with substituted aryl aldehydes in
methanol to produce substituted 2′-hydroxychalcones (1a–1q). These intermediate compounds (1a–1q) were characterized
by FTIR and NMR spectroscopy and subjected to the next step, which
involves the cycloaddition of these intermediate 2′-hydroxychalcones (1a–1q) with phenylhydrazine hydrochloride in the presence
of glacial acetic acid to furnish the target compounds (2a–2q) in good to excellent yields. The desired compounds (2a–2q) were purified through recrystallization by ethanol. The structures
of novel pyrazoline analogs were elucidated using common spectral
techniques such as FTIR, UV–Vis, NMR, and mass spectrometry.
For example, the IR spectra of the pyrazoline derivatives depicted
the absorption bands around 3357 for the OH group, 3090 for aromatic
(C–H), 1592 for (C=N), and 1500 for (C=C). Similarly,
the 1H NMR spectra of these compounds revealed a characteristic
singlet signal around δ 12.00 ppm for the OH group. The aromatic
protons were observed as multiplets in the region of δ 6.64–7.92
ppm. The presence of other protons in the pyrazoline moiety was observed
as a doublet of doublets in the region of δ 2.98–3.04,
3.79–3.86, and 5.37–5.42 ppm corresponding to three
protons in HA, HB, and HX patterns, respectively. Moreover, the molecular
masses of all the newly synthesized compounds were corroborated by
EI-MS, thus all the spectral data unequivocally confirm the proposed
structures of the target 1,3,5-triaryl-2-pyrazolines.
Scheme 1
Synthesis
of Chalcones (1a–1q) and Pyrazolines
(2a–2q)
The spectral data of previously reported 2′-hydroxychalcones (1a–1q) are given in the following reference articles 1a, 1e, 1g, 1j,[82]1b,[83]1c,[84]1d,[85]1f,[86]1h,[87]1i,[88]1k,[89]1l,[90]1m, 1n, 1o(91), 1p(92) and 1q.[93] The spectral
data of all the synthesized pyrazolines (2a–2q) are given here:
All
synthesized pyrazoline analogs (2a–2q) were evaluated
for their in vitro urease inhibitory activity. It is noteworthy that
except compound 2i, the rest of the derivatives were
found to be significant urease inhibitors with IC50 values
in the range of 9.13 ± 0.25 to 18.42 ± 0.42 μM as
compared to the standard thiourea (IC50 = 21.37 ±
0.26 μM) (Table ). The varying activities of synthetic derivatives might be due to
the varied substituents on aromatic rings. Compounds 2b, 2g,
2m, and 2q having IC50 values of 9.36
± 0.27, 9.13 ± 0.25, 9.18 ± 0.35, and 9.35 ± 0.35
μM, respectively, showed excellent inhibitory activities due
to the isobutyl, (−OCH3)2, −CF3, and −CN groups. Excitingly, analog 2m bearing a −CF3 group on the phenyl ring at the
second position exhibited most potent activity having an IC50 value of 9.18 ± 0.35 μM compared to compounds 2n and 2o having −a CF3 group on the
phenyl ring at the third and fourth positions having IC50 values of 18.42 ± 0.42 and 12.63 ± 0.56 μM, respectively.
All these analogs showed excellent activity as compared to the standard
thiourea (IC50 = 21.37 ± 0.26 μM). The substitution
pattern of −F and −OCH3 functionalities at
the aryl ring in compounds 2a and 2e is
the crucial factor of enzyme inhibition of these compounds. The derivatives
with electron-donating groups (EDGs) attached to the phenyl ring have
a better urease inhibitory activity than the analogs with electron-withdrawing
groups (EWGs) attached to phenyl rings (Table ) and (Figure ).
Table 1
Urease and α-Glucosidase Inhibitory
Activities of Pyrazolines (2a–2q)
compound
no.
urease IC50 ± SEM (μM)
α-glucosidase IC50 ± SEM (μM)
2a
13.54 ± 0.34
445.83 ± 1.25
2b
9.36 ± 0.27
462.94 ± 1.23
2c
12.57 ± 0.43
212.52 ± 1.31
2d
13.28 ± 0.25
421.34 ± 1.27
2e
15.39 ± 0.38
384.73 ± 1.45
2f
15.57 ± 0.42
407.28 ± 1.24
2g
9.13 ± 0.25
419.45 ± 1.32
2h
11.26 ± 0.51
NA
2i
29.51 ± 0.35
NA
2j
13.67 ± 0.47
NA
2k
13.29 ± 0.25
237.26 ± 1.28
2l
NA*a
457.82 ± 1.25
2m
9.18 ± 0.35
138.35 ± 1.32
2n
18.42 ± 0.42
434.26 ± 1.29
2o
12.63 ± 0.56
114.57 ± 1.35
2p
12.24 ± 0.38
NA
2q
9.35 ± 0.35
NA
thiourea (standard)
21.37 ± 0.26
acarbose (standard)
375.82 ± 1.76
NA* = no activity.
Figure 3
Graphical representation of IC50 values of
analogs 2a–2q based on the urease enzyme.
Graphical representation of IC50 values of
analogs 2a–2q based on the urease enzyme.NA* = no activity.
α-Glucosidase
Inhibitory Activity
In continuation to our previous studies
on α-glucosidase,[73c] pyrazolines
(2a–2q) were
assessed for their antidiabetic activity as described in the Method
section. All the tested compounds (2a–2q) showed
moderate to good inhibition activity against the α-glucosidase
enzyme. The table below illustrates the IC50 values of
the tested compounds and reference acarbose (IC50 = 375.82
± 1.76 μM). The compounds (2a–2q) showed
IC50 values in the range of 114.57 ± 1.35 to 462.94
± 1.23 μM (Table and Figure ). Among the synthesized pyrazolines, the compounds 2c, 2k,
2m, and 2o exhibited excellent α-glucosidase
inhibitory activity with the lowest IC50 values of 212.52
± 1.31, 237.26 ± 1.28, 138.35 ± 1.32, and 114.57 ±
1.35 μM, respectively. Therefore, compounds 2c, 2k, 2m, and 2o bearing −Br, −N(C2H5)2, 2-CF3, and 4-CF3, respectively, could be recommended as potential drug candidates
for the treatment of diabetes mellitus in the future.
Figure 4
Graphical representation
of IC50 values of analogs 2a–2q based
on α-glucosidase enzyme.
Graphical representation
of IC50 values of analogs 2a–2q based
on α-glucosidase enzyme.Overall, it is concluded that among the synthesized pyrazoline
series, compound 2m is a dual potent inhibitor against
urease and α-glucosidase due to the presence of 2-CF3 electron-withdrawing functionality on the phenyl ring.
Kinetic Study
The mechanism of inhibition
was further examined by a complete kinetic analysis of the most powerful
derivative 2g (urease inhibitor) at various concentrations
(0–20 μM) and substrates (0.5–4.0 mM). Enzymatic
kinetics were used to establish the mode of inhibition and the inhibition
constant (Ki). Lineweaver Burk plots used
to determine the inhibition mode by measuring the kinetics of most
active compound 2g are presented in Figure . To calculate Ki values, Lineweaver Burk secondary plots were drawn between
the slope of each line and different inhibitor concentrations. To
confirm the Ki value of the inhibitor,
Dixon plots were constructed between the reciprocal of the rate of
reaction and different concentrations of inhibitors. It was determined
from kinetic study that 2g was a competitive inhibitor
with a Ki value of 19.11 μM, a Km value of 0.93 mM, and a Vmax value of 5.76 μM/min at a 20 μM inhibitor
concentration.
Figure 5
Enzyme kinetics of analog 2g, (A) Lineweaver
Burk
plot, (B) secondary replot (Lineweaver Burk), and (C) Dixon plot for
the urease inhibition activity. Note: Vmax is the maximum velocity of enzymatic activity at a 20 mM inhibitor
concentration, is the Michaelis–Menten constant at a 20 mM inhibitor concentration,
and (μM)
is the value calculated from the Dixon plot.
Enzyme kinetics of analog 2g, (A) Lineweaver
Burk
plot, (B) secondary replot (Lineweaver Burk), and (C) Dixon plot for
the urease inhibition activity. Note: Vmax is the maximum velocity of enzymatic activity at a 20 mM inhibitor
concentration, is the Michaelis–Menten constant at a 20 mM inhibitor concentration,
and (μM)
is the value calculated from the Dixon plot.
Structure–Activity Relationship Based
on Urease, α-Glucosidase Inhibition Assay
All the synthetic
analogs (2a–2q) were investigated for their urease
and α-glucosidase inhibitory activities (in vitro). Structure–activity
relationship (SAR) studies were carried out purely based on the central
core and substitution patterns on the pyrazoline scaffold. Based on
the SAR, it can be asserted that the variations observed in urease
and α-glucosidase inhibitory activities of 1,3,5-triaryl-2-pyrazoline
analogs (2a–2q) were owing to different substituents.
Limited SAR was established based on the substitution pattern on the
pyrazoline scaffold and are accountable for influencing bioactivities
(Figure ).
Figure 6
Impact of the
core nucleus and variable substituents on SAR of
pyrazolines.
Impact of the
core nucleus and variable substituents on SAR of
pyrazolines.In this regard, it is noteworthy
that compounds 2c (IC50 = 12.57 ± 0.43
μM for urease and 212.52
± 1.31 μM for α-glucosidase), 2k (IC50 = 13.29 ± 0.25 μM for urease and 237.26 ±
1.28 μM for α-glucosidase), 2m (IC50 = 9.18 ± 0.35 μM for urease and 138.35 ± 1.32 μM
for α-glucosidase), and 2o (IC50 = 12.63
± 0.56 μM for urease and 114.57 ± 1.35 μM for
α-glucosidase) were found to be the most potent dual inhibitors
among the members of the series. All these synthetic analogs showed
even higher activity than the standards thiourea (IC50 =
21.37 ± 0.26 μM) and acarbose (IC50 = 375.82
± 1.76 μM). Compounds 2c, 2k, 2m, and 2o have various EDGs and EWGs at o- and p-positions of the
aryl ring. The analogs 2m and 2o possess
an inductively strong EWG, trifluoromethyl (−CF3) group, at the o-position and the p-position of the phenyl ring.
The highest inhibition by 2m and 2o may
be attributed to their position and strong interactions with the active
pocket of the enzyme. The analog 2c bears an EWG (−Br)
at the p-position on ring B. It seems that this atom is also suitably
positioned on the ring to foster favorable interaction with the active
pocket of the enzyme. The analog 2k has a −N(C2H5)2 group present on the pyrazoline
framework and is accountable for enhanced inhibitory activity due
to excellent interaction with the active pockets of the enzyme. Almost
certainly, this functional group fits effectively into the large active
pocket of the enzyme.Interestingly, the next most potent inhibitor
is compound 2g (IC50 = 9.13 ± 0.25 μM
for urease)
among the remaining analogs of the series. It is also more active
than the standards, thiourea and acarbose. This compound 2g has methoxy at position-3 and -4 on ring B of the pyrazoline carbon
skeleton and thus was found to be a highly potent urease and glucosidase
inhibitor as well. The high inhibition potential might be due to the
electronegativity of one methoxy group at 3rd and 4th positions of
the phenyl ring, which suitably interacts with the enzyme active site.Subsequently, the next synthetic analog with a comparable IC50 value is compound 2q (IC50 = 9.35
± 0.35 μM). This compound also showed a strong inhibitory
activity against the urease enzyme than the reference standard inhibitor
thiourea. This might be a result of the strong chelation of benzonitrile
moiety derivative 2q with the active electrophilic center
of the urease enzyme.Furthermore, the replacement of the aromatic
ring with other heterocyclic
rings such as thiophene in compound 2i (IC50 = 29.51 ± 0.35 μM) showed a decreased inhibition activity
as compared to the standard (Table ). The urease inhibition by compound 2i relied on the ability of a sulfur atom to coordinate within the
active site of the urease enzyme. Afterward, the next compounds manifesting
inhibitory activities are 2h (IC50 = 11.26
± 0.51 μM) and 2j (IC50 = 13.67
± 0.47 μM), where the aromatic ring B is substituted at
position-4 with −COOH and acetamido (NHCOCH3) groups,
respectively. Interestingly, the highly hydrophilic p-substituted
analogs 2h and 2j exhibited excellent activity
against urease.Additionally, compounds 2a (IC50 = 13.54
± 0.34 μM for urease and 445.83 ± 1.25 μM for
α-glucosidase), 2b (IC50 = 9.36 ±
0.27 μM for urease and 462.94 ± 1.23 μM for α-glucosidase), 2d (IC50 = 13.28 ± 0.25 μM for urease
and 421.34 ± 1.27 μM for α-glucosidase), 2e (IC50 = 15.39 ± 0.38 μM for urease and 384.73
± 1.45 μM for α-glucosidase), 2f (IC50 = 15.57 ± 0.42 μM for urease and 407.28 ±
1.24 μM for α-glucosidase), 2g (IC50 = 9.13 ± 0.25 μM for urease and 419.45 ± 1.32 μM
for α-glucosidase), 2l (IC50 = 457.82
± 1.25 μM for α-glucosidase), 2n (IC50 = 18.42 ± 0.42 μM for urease and 434.26 ±
1.29 μM for α-glucosidase), and 2p (IC50 = 12.24 ± 0.38 μM for urease) were found to be
more active against the envisioned enzyme urease and less active against
α-glucosidase. These findings reflect that various EWGs and
EDGs (i.e., −F, −isobutyl, −(OCH3)3, p-OCH3, −N(CH3)2, −(OCH3)2, −(OCH3)2, phenyl, m-CF3,
and −(CH3)2) on the aryl ring are accountable
for their excellent inhibitory activities because of increased interaction
with the urease enzyme. Moreover, these findings also suggest that
highly hydrophilic and hydrophobic (i.e., −F, −isobutyl,
−(OCH3)3, p-OCH3, −N(CH3)2, −(OCH3)2, −(OCH3)2, phenyl, m-CF3, and −(CH3)2) groups on the aromatic ring are accountable for low inhibitory
activities because of reduced favorable interactions with the active
site of the target enzyme (α-glucosidase) due to conformational,
steric, and electronic factors. Comparatively, the synthesized derivatives
(2a–2q) are more active against urease as compared
to the α-glucosidase enzyme.Overall, it should be noted
that these studies reveal that the
nature, position, and number of substituents on the aryl ring greatly
influence the activities of these analogs. In addition, it is evident
from the results that bulky and polar functional groups present at
the p-position on the phenyl ring play an essential role in controlling
the inhibitory potential of the pyrazoline scaffold against the tested
enzymes.
Cytotoxicity in Treated Cell Lines
The cytotoxic effects of 2a–2q on human breast
carcinoma, MCF-7 and cervical cancer, HeLa cell lines were investigated.
There was a dose-dependent increase in cytotoxicity of 2l on both cancer cell lines as shown in Figure . Interestingly, MCF-7 was shown to be more
sensitive as compared to HeLa cells after treatment with 2l having EC50 of 120 μM/mL and EC50 of
510 μM/mL, respectively. Similarly, 2k exhibited
a lower EC50 (250 μM/mL) on MCF-7 as compared to
HeLa cell (EC50 500 μM/mL). A similar cytotoxic effect
was observed on MCF-7 and HeLa cells after treatment with 2a–2j and 2m–2q, where both cell lines possessed EC50 > 500 as shown in Table . Furthermore, 2l is more sensitive toward
MCF-7 cells as compared to the capecitabine (CP) drug with an EC50 of 980 μM/mL. MCF-7 was more sensitive toward 2l as compared to HeLa cells in our studies. Therefore, 2l was selected for MCF cells to further investigate the mode
of cell death (apoptosis).
Figure 7
Cytotoxicity of 2l on MCF-7 and
HeLa cells after 72
h.
Table 2
EC50 Values
of 1–17 (μM/m)
EC50
compound
no.
MCF-7
HeLa
2a
>500
>500
2b
>500
>500
2c
>500
>500
2d
>500
>500
2e
>500
>500
2f
>500
>500
2g
>500
>500
2h
>500
>500
2i
>500
>500
2j
>500
>500
2k
250 ± 0.09
>500
2l
120 ± 0.10
510
2m
>500
>500
2n
>500
>500
2o
>500
>500
2p
>500
>500
2q
>500
>500
Cytotoxicity of 2l on MCF-7 and
HeLa cells after 72
h.
Apoptosis Study (Early Apoptosis)
In order to determine the mode of MCF-7 cell death, Annexin V-FITC
was used. MCF-7 cells were treated with 2l at a concentration
of EC50 at 72 h for 6 and 9 h along with positive (CP)
and negative control (without treatment). 2l was shown
to induce early apoptosis by exposure of phosphoserine (PS) from inward
to outward of the plasma membrane (PM) of cancer cell, which was detectable
in cells by the green stain of Annexin-FITC after 6 h incubation treatment.
Remarkably, both early (Annexin-FITC V+) and late apoptosis
propidium iodide positive (PI+) cells were visible after
9 h. Besides, most of the cell death occurred due to apoptosis (AnnexinV+/PI+) with very few cells undergoing necrosis (Annexin
V–/PI+) as shown in Figure . Apoptosis (programmed cell
death) is a highly regulated mechanism noticeable by various morphological
features of cell such as cytoplasmic shrinkage and reduction of cell
size, permeabilization of the PM, nuclear condensation, and DNA fragmentation.[94] Externalization of the PS protein to the outer
leaflet of a cell membrane is among the early steps in the induction
of apoptosis, which provides a signal to immune cells, probably phagocytes
to further engulfment of apoptotic cells.[95] Excitingly, the results revealed the cytotoxic effects of 2l by apoptosis in the MCF-7 cell line.
Figure 8
Green stain (annexin-FITC)
signifies induction of early apoptosis
and red (PI) late apoptosis in MCF-7 cells treated with; (A,B) 2l for 6 and 9 h; (C,D) CP for 6 and 9 h; and (E,F) negative
control for 6 and 9 h incubation.
Green stain (annexin-FITC)
signifies induction of early apoptosis
and red (PI) late apoptosis in MCF-7 cells treated with; (A,B) 2l for 6 and 9 h; (C,D) CP for 6 and 9 h; and (E,F) negative
control for 6 and 9 h incubation.
Apoptosis Study (Late Apoptosis)
In order
to further validate the cytotoxicity by induction of apoptosis
in the MCF-7 cell line, a fluorescence terminal nick end labeling
of DNA (TUNEL) detection system was used. The in situ fluorometric
determination of DNA fragmentation via TUNEL is a sensitive and accurate
method of detection of apoptosis in cancer cells. Rows A and B in Figure present the cells
treated with 2l and CP alone, respectively, at a concentration
of EC50 of 72 h. The nuclei of MCF-7 cells treated with 2l were morphologically detectable (green) due to the polymerization
reaction of labeled nucleotides by a transferase enzyme (TdT) at the
site of fragmented DNA after 36 h incubation treatment. Accordingly,
DNA fragmentation is considered as a hallmark of apoptosis, which
also plays a major role in the detection of apoptosis in cancer cells.[96] Also, green-stained nuclei were observed in
CP-treated cells. However, nuclei of negative control (no treatment)
and the DNA of MCF-7 cells remain intact and the lack of green stain
is noticeable under an Image Xpress Micro XLS Widefield High-Content
Analysis System (HCS) (Sunnyvale, USA).
Figure 9
(A–D) Presence
of green stain (FITC), which indicates DNA
fragmentation in MCF-7 cells treated with: (A) 2l; (B)
CP; and (C) negative control (untreated) for 36 h incubation.
(A–D) Presence
of green stain (FITC), which indicates DNA
fragmentation in MCF-7 cells treated with: (A) 2l; (B)
CP; and (C) negative control (untreated) for 36 h incubation.
In Silico Studies
Docking Analysis
ChemDraw was used
to create 2D structures of compounds (2a-2q), which were
then transformed into 3D using Chem Pro3D software. The ligands were
docked to the protein using AutoDock 4.2.0 after being energetically
minimized using Merck Molecular Force Field (MMFF). Table and Figure show the docking results, with just the
best conformers and dock scores for each ligand. The ligand with the
lowest docking score will produce the most stable drug–receptor
combination. Hydrogen bonding, hydrophobic type interactions, and
van der Waal’s interactions were investigated in the drug–receptor
complexes of several powerful ligands.
Table 3
Binding Energies (Kcal mol–1) of
Synthesized Analogs (2a–2q) against Urease
and α-Glucosidase
docking study against urease
docking study against α-glucosidase
compound
no.
lowest binding
energy (Kcal mol–1)
mean
binding
energy (Kcal mol–1)
lowest
binding
energy (Kcal mol–1)
mean
binding
energy (Kcal mol–1)
2a
–7.98
–7.63
–6.68
–6.14
2b
–8.74
–7.70
–7.20
–6.59
2c
–8.65
–8.59
–7.29
–6.64
2d
–8.24
–7.51
–6.31
–5.72
2e
–8.23
–7.87
–6.78
–6.16
2f
–8.47
–8.00
–6.78
–6.16
2g
–9.16
–8.31
–6.59
–5.95
2h
–8.40
–7.81
–6.25
–5.59
2i
–7.81
–7.49
–7.19
–6.35
2j
–8.68
–8.15
–7.58
–6.79
2k
–8.41
–7.86
–6.65
–6.05
2l
–7.85
–7.38
–7.67
–6.69
2m
–7.74
–7.14
–6.53
–6.04
2n
–7.74
–7.32
–6.51
–5.99
2o
–7.78
–7.33
–7.48
–5.91
2p
–7.65
–7.14
–6.57
–5.93
2q
–8.32
–7.96
–7.35
–7.35
standard
–8.31 (AHA)
–8.11 (AHA)
–7.98 (MIG)
–7.61 (MIG)
Figure 10
Graphical depiction
of docking scores (Kcal/mol) of synthesized
pyrazolines (2a–2q).
Graphical depiction
of docking scores (Kcal/mol) of synthesized
pyrazolines (2a–2q).Root mean square deviation (RMSD) is used
to assess the validity
of docking research. To calculate the RMSD value, the cocrystalline
ligand was removed from the active pockets of the selected substrate
and redocked. The docked poses of AHA and MIG overlapped with the
poses in the X-ray crystal structure (PDBs: 4H9M and 5NN6) at RMSD values
of 0.6 and 0.8 Å, respectively, which validates the docking process.2c, an important ligand (lowest binding energy, −8.65
Kcal mol-1), expressed promising inhibitory potential
against the urease enzyme. This ligand 2c developed conventional
hydrogen bonding with the His593 amino acid residue of biological-targeted
moiety 4H9M. In addition to hydrogen bonding, this ligand 2c also built up several important interactions such as hydrophobic
π-alkyl and electrostatic π-anion with Met637, Asp633,
Ala636, Ala436, and Arg439 inside the active pockets of under study
protein 4H9M as shown in Figure a,b.
Figure 11
(a) Putative binding interactions of ligand 2c against
urease. (b) Interactions of the ligand 2c in 3D space.
Interactions with specific amino acid residues are shown in the box.
The 3D ribbon represents the enzyme-stick model of the lowest energy
conformers of the inhibitor 2c along with amino acids
of urease interacting with it.
(a) Putative binding interactions of ligand 2c against
urease. (b) Interactions of the ligand 2c in 3D space.
Interactions with specific amino acid residues are shown in the box.
The 3D ribbon represents the enzyme-stick model of the lowest energy
conformers of the inhibitor 2c along with amino acids
of urease interacting with it.In the same fashion, this ligand 2c (lowest binding
energy −7.29 Kcal mol–1) is also a potential
inhibitor of glucosidase enzyme. This ligand 2c performed
its action by building conventional hydrogen bonds with Arg600 and
Asp616 amino acid residues of the targeted biological specimen 5NN6.
Trp481, Trp376, Phe649, and Met519 amino acid residues also developed
hydrophobic π–π T-shaped, hydrophobic π–π
stacked, and hydrophobic alkyl type associations inside the active
pockets of under study molecule 5NN6. The inhibitory effect of this
ligand also increases due to the electrostatic π anion interaction
against Asp282 and Asp518 inside 5NN6 as shown in Figure a,b.
Figure 12
(a) Putative binding
interactions of ligand 2c against
α-Glucosidase. (b) Interactions of the ligand 2c in 3D space. Interactions with specific amino acid residues are
shown in the box. The 3D ribbon represents the enzyme-stick model
of the lowest energy conformers of the inhibitor 2c along
with amino acids of α-glucosidase interacting with it.
(a) Putative binding
interactions of ligand 2c against
α-Glucosidase. (b) Interactions of the ligand 2c in 3D space. Interactions with specific amino acid residues are
shown in the box. The 3D ribbon represents the enzyme-stick model
of the lowest energy conformers of the inhibitor 2c along
with amino acids of α-glucosidase interacting with it.Another potent ligand 2g (lowest binding
energy −9.16
Kcal mol–1) reveals its inhibitory potential against
urease enzyme via various intermolecular attractions. This ligand 2g exhibits hydrogen bonding with Arg609, Arg439, and Gln635
amino acid residues of under study protein 4H9M. This ligand also
undergoes electrostatic π anion type interactions with Asp633
of 4H9M. Ala636, Arg439, Ala440, and His492 amino acid residues of
4H9M protein associate with ligand 2g via hydrophobic
alkyl, hydrophobic π alkyl, hydrophobic π–sigma,
and hydrophobic π–π T-shaped type interactions
as shown in Figure a,b.
Figure 13
(a) Putative binding interactions of ligand 2g against
Urease. (b) Interactions of the ligand 2g in 3D space.
Interactions with specific amino acid residues are shown in the box.
The 3D ribbon represents the enzyme-stick model of the lowest energy
conformers of the inhibitor 2g along with amino acids
of urease interacting with it.
(a) Putative binding interactions of ligand 2g against
Urease. (b) Interactions of the ligand 2g in 3D space.
Interactions with specific amino acid residues are shown in the box.
The 3D ribbon represents the enzyme-stick model of the lowest energy
conformers of the inhibitor 2g along with amino acids
of urease interacting with it.Similarly, ligand 2o (lowest binding energy −7.48
Kcal mol–1) is a potent inhibitor against the glucosidase
enzyme. The flouro group of the ligand 2o involves in
hydrogen bonding with Ser523 of 5NN6. The hydroxyl group of the ligand 2o also undergoes hydrogen bonding with Arg600 and Asp616
amino acid residues of the targeted molecule 5NN6. Aromatic delocalized
π electronic cloud of the ligand 2o develops electrostatic
π cation, electrostatic π anion, and hydrophobic π–π
stacked type associations with Arg600, Asp282, Trp376, and Asp518
amino acid residues of targeted biological specimen 5NN6. Met519 amino
acid of the 5NN6 protein builds up hydrophobic alkyl and hydrophobic
π alkyl type interactions with ligand 2o as shown
in Figures a,b.
Figure 14
(a)
Putative binding interactions of ligand 2o against
α-glucosidase. (b) Interactions of the ligand 2o in 3D space. Interactions with specific amino acid residues are
shown in the box. The 3D ribbon represents the enzyme-stick model
of the lowest energy conformers of the inhibitor 2o along
with amino acids of α-glucosidase interacting with it.
(a)
Putative binding interactions of ligand 2o against
α-glucosidase. (b) Interactions of the ligand 2o in 3D space. Interactions with specific amino acid residues are
shown in the box. The 3D ribbon represents the enzyme-stick model
of the lowest energy conformers of the inhibitor 2o along
with amino acids of α-glucosidase interacting with it.
Drug-Likeness Study
The expected
chemoinformatics properties, for instance, solubility, polarizability,
and polar surface area were evaluated computationally. Already reported
data were used to establish a standard value for the number of atoms
(20–70) and molar molecular weight (160–480).[73c,75] Inferences have shown that expected values of 2c, 2g, and 2o are better than those of all other synthesized
compounds as well as standard values. Furthermore, the Lipinski’s
rule of five (RO5) does not state anything about structural features
or specific chemistry present in drugs or non-drugs. The computational
results predicted that 2c, 2g, and 2o possess
2, 4, and 2 hydrogen bond acceptor (HBA) (≤10), 1, 1, and 1
hydrogen bond donor (HBD) (≤5), 0.42, 2.23, and 0.40 mg/L Log S, and PSA 30.47, 45.73, and 30.47 A2 (≤120
A2) values, respectively, which considerably indicated
their drug-like behavior with drug-like model scores 0.01, 0.27, and
−0.32. Besides, their molecular weights (392.05, 374.16, and
382.13 g/mol, respectively) were also better than the standard value
(Table and Figure ). These findings illustrate that many derivatives
show drug-like effects without violating any of the rules regarding
their medicinal potential.
Table 4
Physicochemical Properties of Synthesized
Pyrazoline Analogs (2a–2q)
compound
no.
mol. formula
mol. wt (g/mol)
no. HBAa
no. HBDb
mol. Log Pc
mol. Log Sd (mg/L)
mol. PSAe A2
drug-likeness model score
2a
C21H17FN2O
332.13
2
1
5.79
0.65
30.47
0.19
2b
C25H26N2O
370.20
2
1
7.49
0.45
30.47
0.96
2c
C21H17BrN2O
392.05
2
1
6.56
0.42
30.47
0.01
2d
C24H24N2O4
404.17
5
1
5.72
1.63
53.53
0.42
2e
C22H20N2O2
344.15
3
1
5.68
1.27
38.01
0.24
2f
C23H23N3O
357.18
2
1
5.79
1.02
33.27
0.08
2g
C23H22N2O3
374.16
4
1
5.40
2.23
45.73
0.27
2h
C22H18N2O3
358.13
4
2
5.53
2.13
58.88
0.41
2i
C19H16N2OS
320.10
3
1
5.25
8.50
31.49
–0.36
2j
C22H19N3O2
357.15
3
3
4.37
4.05
64.53
0.57
2k
C25H27N3O
385.22
2
1
6.53
0.51
33.20
0.23
2l
C21H18N2O
314.14
2
1
5.73
0.76
30.47
–0.45
2m
C22H17F3N2O
382.13
2
1
6.55
0.46
30.47
–0.69
2n
C22H17F3N2O
382.13
2
1
6.60
0.30
30.47
–0.44
2o
C22H17F3N2O
382.13
2
1
6.67
0.40
30.47
–0.32
2p
C23H22N2O
342.17
2
1
6.82
0.49
30.47
–0.06
2q
C22H17N3O
339.14
3
1
5.33
6.10
47.52
–0.29
The table above
depicts all of Lipinski’s
RO5 components, that is, the number of HBAs.
Number of HBDs.
Octanol–water partition coefficient.
Measured solubility.
Total polar surface area.
Figure 15
Drug-likeness score bar chart.
Drug-likeness score bar chart.The table above
depicts all of Lipinski’s
RO5 components, that is, the number of HBAs.Number of HBDs.Octanol–water partition coefficient.Measured solubility.Total polar surface area.
Conclusions
In conclusion,
we have synthesized a series of 1,3,5-triaryl-2-pyrazoline
derivatives using precedent methodologies and evaluated their inhibitory
potential against urease and α-glucosidase. Their cytotoxic
activities were also investigated. The synthesized compounds showed
varying degrees of urease inhibitory activity ranging from 9.13 ±
0.25 to 18.42 ± 0.42 μM. Among the series of compounds,
the compound 2g exhibited the lowest IC50 value
(9.13 ± 0.25 μM) against urease, and other compounds in
the series also showed excellent antiurease activity as compared to
standard thiourea (IC50 = 21.37 ± 0.26 μM).
Compounds 2a, 2b, 2c, 2d, 2e, 2f, 2h, 2j, 2k, 2m, 2n, 2o, 2p, and 2q having IC50 values of 13.54 ±
0.34, 9.36 ± 0.27, 12.57 ± 0.43, 13.28 ± 0.25, 15.39
± 0.38, 15.57 ± 0.42, 11.26 ± 0.51, 13.67 ± 0.47,
13.29 ± 0.25, 9.18 ± 0.35, 18.42 ± 0.42, 12.63 ±
0.56, 12.24 ± 0.38, and 9.35 ± 0.35 μM, respectively,
showed excellent inhibitory activity as compared to standard thiourea
(IC50 = 21.37 ± 0.26 μM). The inhibition mechanism
of biologically assayed compound 2g (competitive inhibition)
was investigated by Lineweaver Burk and Dixon plots to determine the Vmax, Km, and Ki values. The compounds (2a–2q) also exhibited α-glucosidase IC50 values in the
range of 114.57 ± 1.35 to 462.94 ± 1.23 μM. Furthermore,
the compounds 2c, 2k, 2m, and 2o exhibited
excellent α-glucosidase inhibitory activity with the lowest
IC50 = 212.52 ± 1.31, 237.26 ± 1.28, 138.35 ±
1.32, and 114.57 ± 1.35 μM, respectively, as compared to
the standard acarbose (IC50 = 375.82 ± 1.76 μM).
Additionally, compound 2m acts as a potential dual inhibitor
against urease and α-glucosidase. Exploring the urease and α-glucosidase
inhibiting activities of the synthesized pyrazolines, we herein report
that pyrazolines are potent dual urease and α-glucosidase inhibitors.
Moreover, the cytotoxicity studies were performed and findings revealed
that compound 2l displayed moderate and selective anticancer
activity against MCF-7 and HeLa cell lines compared to CP. It is noteworthy
to mention that the synthesized compounds are comparatively more active
against urease than the α-glucosidase enzyme. In addition, compound 2l significantly induced apoptosis in both cell lines. The
SAR study established that the nature, as well as the position of
varying groups attached to the aryl group, played crucial roles in
defining the urease and α-glucosidase inhibition activities.
The molecular docking results agreed with the in vitro biological
assay data. Pharmacological studies revealed that synthesized analogs 2a–2q obey Lipinski’s rule. Drug-likeness parameter
assessment showed that these analogs show considerable lead-like characteristics
with the least toxicity and can serve as templates in drug designing.
Experimental Section
Materials and Methods
All the chemicals
and solvents were purchased from Merck and Sigma-Aldrich and were
utilized as received. The melting points were determined on an electrothermal
digital instrument, which are uncorrected. The IR spectra were recorded
on a Bio-Rad spectrophotometer. The NMR spectra were obtained using
a Bruker spectrometer (1H, 500 MHz, 13C, 126
MHz). NMR chemical shift values were defined in δ (ppm) units.
TLC was used to check/monitor reaction progress and completion and
spots were visualized under a UV lamp (254 nm). The QUARTZ cell was
used to record the absorption spectra in ethanol on the Jasco UV-VIS
V-660 instrument. Accurate mass measurements were carried out with
the Fisons VG sector-field instrument (EI) and a FT-ICR mass spectrometer.
General Procedures for the Syntheses of Chalcones
(1a–1q) and 1,3,5-Triaryl-2-pyrazolines (2a–2q)
In the first step, chalcones were synthesized
by Claisen–Schmidt condensation according to the literature
procedure.[75,76] A mixture of 2′-hydroxyacetophenone
(1.0 mmol) and aqueous NaOH solution (30%, 5.0 mL) was dissolved in
distilled methanol (15 mL) and stirred for 30 min at ambient temperature,
followed by the dropwise addition of aromatic aldehyde (1.0 mmol).
Reactions were monitored by TLC using ethyl acetate/n-hexane (1:3) as a solvent system. After the reaction completion
(checked by TLC), the reaction content was poured onto the ice-water
and neutralized by HCl (10%). The product obtained was filtered, washed
with cold water, and was recrystallized from ethanol to obtain the
purified compounds (1a–1q) in good yields. In
the second step, pyrazolines were synthesized according to the literature.[77] Appropriate chalcones (1 mmol) were dissolved
in glacial acetic acid. To this mixture, phenylhydrazine HCl (1 mmol)
was added and the reaction mixture was refluxed for 16–18 h.
The reaction was monitored by TLC using ethyl acetate/n-hexane (1:3) as a solvent system. After the reaction completion,
the reaction mixture was then poured onto crushed ice accompanied
by vigorous stirring. It was left at room temperature to obtain a
crystalline compound. The obtained solid was filtered and recrystallized
from ethanol to obtain a pure product (2a–2q) in
good yields.
Enzyme Inhibition Assay
Urease Inhibitory Assay
A reported
method was used to perform the urease inhibitory potential of newly
synthesized pyrazoline derivatives (2a–2q).[1,78] Reaction mixtures containing 55 μL buffer solution comprising
of 100 mM urea and 25 μL enzyme solution were incubated with
5 μL newly synthesized compounds (1 mM concentration) at 30
°C in 96-well plates for 15 min. The production of ammonia was
determined via utilizing the indophenol procedure to analyze the activity
of urease. Momentarily, both 70 μL alkali reagent (0.5% w/v
NaOH and 0.1% active chloride NaOCl) and 45 μL phenol reagent
(1% w/v phenol and 0.005% w/v sodium nitroprusside) were added to
each well. The enhanced absorbance was measured at 630 nm via utilizing
a microplate reader (Molecular Device, USA) after 50 min. All steps
were performed three times in a final volume of 200 μL. The
final measurements (change in absorbance per min) were obtained via
utilizing the SoftMax Pro software (Molecular Device, USA) for the
abstraction of the results. Assays were performed at pH 8.2 (0.01
M K2HPO4·3H2O, 1 mM EDTA, and
0.01 M LiCl). Acetohydroxamic acid was used as the standard inhibitor
of urease.Percentage of inhibition was calculated from the
following formula
α-Glucosidase Inhibitory
Assay
The α-glucosidase inhibitory activity of newly
designed derivatives
of pyrazolines (2a–2q) was determined by following
the already reported procedure with minor amendments.[73c] 250 mL of acarbose at different concentrations
(250–1000 mg/mL) was incubated with 500 mL of 1.0 U/mL of α-glucosidase
solution in 100 mM phosphate buffer (pH 6.8) for 20 min at 37 °C.
250 mL of 4-nitrophenyl-b--glucopyranoside
solution and 250 mL of 1% starch[42] dissolved
in 100 mM phosphate buffer (pH 6.8), respectively, were then added
to the reaction mixture and incubated for 1 h at 37 °C.[20] Then, 1.0 mL of the 3,5-dinitrosalicylic acid
coloring reagent was added to the reaction mixture and it was boiled
for 10 min. The absorbance of the final reaction mixture was determined
for α-glucosidase at 405 nm. The preparation of blank was carried
out for correcting absorbance. Acarbose solution was utilized as positive
control. The inhibitory activity was stated as a percentage of a control
sample without the inhibitors.[47]
Kinetic
Study
The kinetics of the
binding mechanism of most dominant compound 2g (inhibitor),
which has an IC50 value comparable with thiourea (standard),
was investigated. Five different inhibitor concentrations (0–20
μM) were reacted with different substrate concentrations (urea,
0.5–4.0 mM) to determine whether the inhibitor is competitive,
noncompetitive (mixed), and uncompetitive after calculating/assessing
the Km (app) Vmax (app) values from the Lineweaver Burk plot, and the Ki values (inhibition constant) were also determined by
the Dixon plot using PRISM 7.0.[79]
Cytotoxicity Study
Culture ware and
other plastic consumables were purchased from Nunc, Denmark. Cancer
cell lines were purchased from American Type Cell Culture, ATCC, USA.
The MTT (3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide)
reagent was obtained from thermofisher scientific, USA, ApoAlert Annexin
V, Clontech, USA, DeadEnd Fluorometric TUNEL Promega, USA. All required
chemicals and cell culture reagents were obtained from Sigma-Aldrich,
USA.
Cell Culturing
The human cell lines
MCF-7 (human breast adenocarcinoma) and HeLa (cervical cancer) were
grown in RPMI 1640 medium (Gibco Life Technologies) containing 10%
fetal calf serum (FCS; Gibco) and 1% antibiotics (100 IU/mL penicillin
and 100 μg/mL streptomycin) in a humidified incubator at 37
°C in 5% CO2 and 95% air.
Cytotoxicity Studies
Cell Viability in Treated
Cell Lines (MTT
Assay)
Cytotoxicity study was carried out using the MTT assay.[80] The cell viability was determined by reading
the absorbance of the metabolized product (purple formazan) of the
MTT reagent by living cells. The cells were plated in a 96-well plate
at a density of 6000 cells/well and incubated at 37 °C in a CO2 incubator for 24 h. Next, the old medium was replaced with
fresh media containing treatments at given concentrations (0, 15.62,
31.25, 62.5, 125, 250, 500, and 1000 μM/mL). After 72 h of incubation,
20 μL of MTT (5 mg/mL) was added to each well and incubated
for 4 h. Subsequently, after removal of media containing treatments,
100 μL of DMSO was added to each well to dissolve crystals of
formazan. Using an Elisa reader, the absorbance was measured at 570
nm (Multiskan, Thermo fisher Scientific USA). The treatment was repeated
three times, with the results calculated as percentage of growth inhibition
values based on the mean of two independent values (SEM). The EC50 (half effective inhibitory concentration) value was calculated
by Graphpad Prism 7 using a non-linear regression model (curve fit)
based on a sigmoidal dose–response curve (variable) (GraphPad,
San Diego, California, USA).
Mode
of Cell Death Study
Determination of Early
Apoptosis in Treated
Cells
The apoptotic effect of the cytotoxic crystal 2l (having lower EC50 value) on the MCF-7 was evaluated
according to the previously reported method.[81] Briefly, MCF-7 cells were plated at a cell density of 10,000 cells/well
and incubated at 37 °C for 24 h. After 24 h, the medium was removed
and replaced with fresh media containing 2l at a concentration
of EC50 along with positive (cisplatin) and negative controls
(without treatment). Next, the cells were incubated in 200 μL
of binding buffer containing Annexin V-FITC (green) and PI (red) for
10 min at 37 °C. The cells were observed under an Image Xpress
Micro XLS Widefield High-Content Analysis System (HCS) (Sunnyvale,
USA).
Determination of Late Apoptosis in Treated
Cells
A TUNEL assay was carried out using the DeadEnd Fluorometric
TUNEL system (Promega, USA) for investigating in situ DNA fragmentation
occurring in treated cells. The assay was performed according to the
manufacturer’s protocol. Briefly, The MCF-7 cells were plated
in Labtek Chamber Slides (Nunc, Denmark) with a density of 2 ×
104 and incubated at 37 °C for 24 h. Next, both treated
and control (without treatment) cells were fixed by 4% paraformaldehyde
solution in PBS (pH 7.4) for 25 min at 4 °C. Subsequently, the
cells were washed with phosphate buffer saline (PBS) for 5 min. After
this, fixed cells were permeabilized for 5 min using 0.2% triton X-100
in PBS. Then, the permeabilized cells were washed with PBS; each step
of washing was done thrice for 5 min. The nick ends of DNA or fragmented
ends were labeled by adding a 50 μL reaction mixture, containing
equilibration Buffer, Nucleotide Mix, and enzyme rTdT in a ratio and
incubated in the dark at 37 °C. 20× SSC (1:10) was diluted
with deionized water and added enough to fill a standard chamber.
Additionally, propidium iodide (PI) solution was freshly prepared
(1 μg/mL in PBS) and added to stain the nuclear DNA for 15 min
at room temperature in the dark. The Image Xpress Micro XLS Widefield
High-Content Analysis System (HCS) (Sunnyvale, USA) was used to detect
the green fluorescence of FITC-labeled apoptotic cells.
Molecular Modeling Assay
AutoDock
4.2.0 was applied in order to study the protein–ligand associations.
The X-ray crystallographic structure of Jack bean urease (JBU) (in
complex with acetohydroxamic acid, AHA) (PDB ID: 4H9M) and α-glucosidase
(in complex with MIG ((2R,3R,4R,5S)-1-(2-hydroxyethyl)-2-(hydroxymethyl)piperidine-3,4,5-triol)
(PDB ID: 5NN6, species Homo sapiens) (www.rcsb.org) was obtained, from
RCSB protein data bank (PDB), as a model. 3D grids of AHA and MIG
in the binding pocket of urease and α-glucosidase were estimated
by using discovery studio 4.0. The protein structure was improved,
and side-chain hydrogens were added.[73a,73b]
Drug-Likeness Study
The Molsoft tool
has been utilized to determine the drug-like characteristics of the
predicted compounds. Lipinski’s RO5 was used to establish a
framework for assessing the bioavailability and pharmacokinetics of
a given molecule when administered orally, using a set of physiochemical
parameters.[73c,75]
Authors: Sherif A F Rostom; Mona H Badr; Heba A Abd El Razik; Hayam M A Ashour; Abeer E Abdel Wahab Journal: Arch Pharm (Weinheim) Date: 2011-07-14 Impact factor: 3.751