| Literature DB >> 35119566 |
Shuai Yuan1, Susanna C Larsson2,3.
Abstract
Adiposity, diabetes, and lifestyle factors are linked to gastroesophageal reflux disease (GERD) in observational studies. We conducted a two-sample Mendelian randomization analysis to determine whether those associations are causal. Independent genetic variants associated with body mass index (BMI), waist circumference (with and without adjustment for BMI), type 2 diabetes, smoking, and alcohol, coffee and caffeine consumption at the genome-wide significance level were selected as instrumental variables. Summary-level data for GERD were available from a genome-wide association meta-analysis of 71,522 GERD cases and 261,079 controls of European descent from the UK Biobank and QSkin Sun and Health studies. The odds ratio (OR) of GERD was 1.49 (95% confidence interval (CI), 1.40-1.60) for one standard deviation (SD) increase in BMI, 1.07 (95% CI, 1.04-1.10) for one-unit increase in log-transformed OR of type 2 diabetes, and 1.41 (95% CI, 1.31-1.52) for one SD increase in prevalence of smoking initiation. There were suggestive associations with GERD for higher genetically predicted waist circumference (OR per one SD increase, 1.14, 95% CI, 1.02-1.26) and caffeine consumption (OR per 80 mg increase, 1.08, 95% CI, 1.02-1.15). Genetically predicted waist circumference adjusted for BMI, alcohol or coffee consumption was not associated GERD. This study suggests causal roles of adiposity, diabetes, and smoking, and a possible role of high caffeine consumption in the development of GERD.Entities:
Keywords: Coffee; Diabetes; Gastroesophageal reflux disease; Mendelian randomization; Obesity; Smoking
Mesh:
Substances:
Year: 2022 PMID: 35119566 PMCID: PMC9329382 DOI: 10.1007/s10654-022-00842-z
Source DB: PubMed Journal: Eur J Epidemiol ISSN: 0393-2990 Impact factor: 12.434
Fig. 1Study design overview. LD, linkage disequilibrium; SNPs, single-nucleotide polymorphisms. There are three assumptions of Mendelian randomization design. The first assumption is that the genetic variants used as instrumental variables should be robustly associated with the exposure; the second assumption is that the used genetic variants should not be associated with any confounders; and the third assumption is that the selected genetic variants should affect the risk of the outcome merely through the risk factor, not via alternative pathways
Information on used studies and consortia
| Exposure or outcome | Unit | Participants included in analysis | Adjustments | Identified SNPs | Variance explained | F-statistic | OR at 80% power | PubMed ID |
|---|---|---|---|---|---|---|---|---|
| Body mass index | SD (~ 4.8 kg/m2) | 806 834 European-descent individuals | Age, sex, and genetic 1–5 principal components | 312 | 7.7% | 286 | ≤ 0.95 or ≥ 1.05 | 25,673,413 |
| Waist circumference | SD | 224 459 European-descent individuals | Age and study-specific covariates | 47 | 1.2% | 86 | ≤ 0.89 or ≥ 1.11 | 25,673,412 |
| Waist circumference adjusted for BMI | SD | 224 459 European-descent individuals | Age, body mass index and study-specific covariates | 70 | 1.5% | 72 | ≤ 0.90 or ≥ 1.10 | 25,673,412 |
| Type 2 diabetes | One-unit in log-transformed odds ratio | 228 499 type 2 diabetes cases and 1 178 783 non-cases of multi-ancestries | Age, sex, and the first ten genetic principal components | 558 | 19.0% | 140 | ≤ 0.97 or ≥ 1.03 | 32,541,925 |
| Smoking initiation | SD in prevalence of smoking initiation | 1 232 091 European-descent individuals | Age, sex, and the first ten genetic principal components | 378 | 2.3% | 21 | ≤ 0.92 or ≥ 1.08 | 30,643,251 |
| Alcohol drinking | SD increase of log-transformed alcoholic drinks/week | 941 280 European-descent individuals | Age, sex, and the first ten genetic principal components | 99 | 0.7% | 24 | ≤ 0.86 or ≥ 1.15 | 30,643,251 |
| Coffee consumption | 50% change | 375 833 European-descent individuals | Age, sex, body mass index, total energy, proportion of typical food intake and 20 genetic principal components | 14 | 0.5% | 119 | ≤ 0.84 or ≥ 1.18 | 31,046,077 |
| Caffeine consumption | 80 mg (close to caffeine from one cup of coffee) | 9876 European-descent individuals | Age, sex, study-site, fasting status, family structure, genetic principal components, and smoking status | 2 | 1.3% | 2190 | ≤ 0.89 or ≥ 1.11 | 27,702,941 |
| GERD | Log-transformed odds ratio | 71 522 GERD cases and 261 079 controls of European descent | Recruitment age, genetic sex, the first ten principal components, and cryptic relatedness | – | – | – | – | 31,527,586 |
GERD Gastroesophageal reflux disease; ID Identifier; OR Odds ratio; SD Standard deviation; SNPs Single-nucleotide polymorphism.
Fig. 2Associations of genetically proxied adiposity, type 2 diabetes, and lifestyle factors with risk of gastroesophageal reflux disease. BMI, body mass index; CI, confidence interval; OR, odds ratio. Estimates were obtained from the inverse variance weighted method with random-effects with the except for estimate for caffeine consumption that was obtained from the inverse variance weighted method with fixed-effects.
Associations of genetically predicted risk factors with gastroesophageal reflux disease in Mendelian randomization sensitivity analyses
| Exposure | Used SNPs | Cochrane’s Q | Weighted median | MR-Egger | ||||
|---|---|---|---|---|---|---|---|---|
| OR | 95% CI | OR | 95% CI | |||||
| Body mass index | 312 | 781 | 1.37 | 1.27, 1.48 | 6.50 × 10–15 | 1.05 | 0.90, 1.23 | 0.529 |
| Waist circumference | 38 | 81 | 1.06 | 0.95, 1.20 | 0.307 | 0.98 | 0.75, 1.29 | 0.906 |
| Waist circumference adjusted for BMI | 62 | 144 | 1.09 | 0.99, 1.20 | 0.082 | 1.47 | 1.03, 2.10 | 0.041 |
| Type 2 diabetes | 278 | 770 | 1.03 | 1.00, 1.07 | 0.055 | 0.98 | 0.93, 1.03 | 0.425 |
| Smoking initiation | 202 | 546 | 1.33 | 1.23, 1.45 | 6.27 × 10–12 | 1.12 | 0.83, 1.51 | 0.454 |
| Alcohol drinking | 71 | 210 | 0.98 | 0.78, 1.22 | 0.839 | 0.92 | 0.61, 1.37 | 0.676 |
| Coffee consumption | 11 | 21 | 1.07 | 0.95, 1.20 | 0.256 | 1.23 | 0.99, 1.53 | 0.100 |
BMI Body mass index; CI Confidence interval; NA Not available; OR Odds ratio; SNPs Single-nucleotide polymorphisms. Sensitivity analyses could not be performed for caffeine consumption due to few SNPs (< 3 SNPs)
aP values for pleiotropy were p values for MR-Egger intercept test and a p value < 0.05 indicates a statistically significant pleiotropic effect
bP values for distortion were obtained from MR-PRESSO test and a p value < 0.05 indicates a statistically significant difference between estimates before and after outlier removal. P of distortion test was not available for the analysis of coffee consumption due to no outlier detected
cThere were 6 outliers detected in MR-PRESSO analysis of BMI, 2 in waist circumference, 4 in waist circumference adjusted for BMI, 10 in type 2 diabetes, 7 in smoking initiation, 4 in alcohol drinking, and 1 in coffee consumption