Literature DB >> 35119359

Novel insights from a multiomics dissection of the Hayflick limit.

Han Yuan1, Ilya Soifer1, Michelle Chan1, Tobias M Maile1, Rebecca Y Wang1, Andrea Ireland1, Jonathon J O'Brien1, Jérôme Goudeau1, Leanne J G Chan1, Twaritha Vijay1, Adam Freund1, Cynthia Kenyon1, Bryson D Bennett1, Fiona E McAllister1, David R Kelley1, Margaret Roy1, Robert L Cohen1, Arthur D Levinson1, David Botstein1, David G Hendrickson1.   

Abstract

The process wherein dividing cells exhaust proliferative capacity and enter into replicative senescence has become a prominent model for cellular aging in vitro. Despite decades of study, this cellular state is not fully understood in culture and even much less so during aging. Here, we revisit Leonard Hayflick's original observation of replicative senescence in WI-38 human lung fibroblasts equipped with a battery of modern techniques including RNA-seq, single-cell RNA-seq, proteomics, metabolomics, and ATAC-seq. We find evidence that the transition to a senescent state manifests early, increases gradually, and corresponds to a concomitant global increase in DNA accessibility in nucleolar and lamin associated domains. Furthermore, we demonstrate that senescent WI-38 cells acquire a striking resemblance to myofibroblasts in a process similar to the epithelial to mesenchymal transition (EMT) that is regulated by t YAP1/TEAD1 and TGF-β2. Lastly, we show that verteporfin inhibition of YAP1/TEAD1 activity in aged WI-38 cells robustly attenuates this gene expression program.
© 2022, Chan et al.

Entities:  

Keywords:  chromosomes; epithelial to mesenchymal transition; gene expression; genetics; genomics; human; myofibroblast; replicative senescence

Mesh:

Year:  2022        PMID: 35119359      PMCID: PMC8933007          DOI: 10.7554/eLife.70283

Source DB:  PubMed          Journal:  Elife        ISSN: 2050-084X            Impact factor:   8.713


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