| Literature DB >> 35119014 |
Felix Eduardo R Punzalan1, Eva Maria C Cutiongco-de la Paz2,3, Jose Jr B Nevado2, Jose Donato A Magno1, Deborah Ignacia D Ona1, Aimee Yvonne Criselle L Aman2,3, Marc Denver A Tiongson1, Elmer Jasper B Llanes1, Paul Ferdinand M Reganit1, Richard Henry P Tiongco1, Lourdes Ella G Santos1, Jaime Alfonso M Aherrera1, Lauro L Abrahan1, Charlene F Agustin1, Adrian John P Bejarin2,3, Rody G Sy1.
Abstract
ABSTRACT: Genetic variation is known to affect response to calcium channel blockers (CCBs) among different populations. This study aimed to determine the genetic variations associated with poor response to this class of antihypertensive drugs among Filipinos.One hundred eighty one hypertensive participants on CCBs therapy were included in an unmatched case-control study. Genomic deoxyribonucleic acid were extracted and genotyped for selected genetic variants. Regression analysis was used to determine the association of genetic and clinical variables with poor response to medication.The variant rs1458038 near fibroblast growth factor 5 gene showed significant association with poor blood pressure-lowering response based on additive effect (CT genotype: adjusted OR 3.41, P = .001; TT genotype: adjusted OR 6.72, P < .001).These findings suggest that blood pressure response to calcium channels blockers among Filipinos with hypertension is associated with gene variant rs1458038 near fibroblast growth factor 5 gene. Further studies are recommended to validate such relationship of the variant to the CCB response.Entities:
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Year: 2022 PMID: 35119014 PMCID: PMC8812666 DOI: 10.1097/MD.0000000000028703
Source DB: PubMed Journal: Medicine (Baltimore) ISSN: 0025-7974 Impact factor: 1.889
Figure 1Overview of data processing and analysis. geno = genotypic missingness, HWE = Hardy-Weinberg equilibrium, MAF = minor allele frequency, mind = individual missingness, SNP = single nucleotide polymorphism.
Clinical characteristics of study participants.
| Characteristics | Poor responders to CCB (n = 65) | Responders to CCB (n = 110) | |
| Age in years, mean (SD) | 59 (12) | 58 (9) | NS |
| Male sex, % | 43.08 | 40.00 | NS |
| Calcium channel blocker used, % | NS | ||
| Amlodipine | 98.46 | 99.09 | |
| Nifedipine | 1.54 | 0.91 | |
| Dyslipidemia, % | 80.00 | 69.09 | NS |
| Type 2 diabetes mellitus, % | 43.08 | 21.82 | .003 |
| Abnormal BMI (≥ 25 kg/m2), % | 52.54 | 47.12 | NS |
| Ischemic heart disease, % | 24.62 | 5.50 | <.001 |
| Stroke, % | 24.62 | 15.45 | NS |
| Lifestyle factors, % | |||
| Smoking | 40.00 | 30.00 | NS |
| Alcohol drinking | 60.00 | 50.91 | NS |
| Creatinine in mg/dl, mean (SD) | 0.98 (0.40) | 0.83 (0.33) | .008 |
| eGFR in ml/min, mean (SD) | 81.92 (27.88) | 93.27 (23.47) | .005 |
| Total cholesterol in mg/dl, mean (SD) | 204.21 (50.68) | 201.46 (49.82) | NS |
| Triglycerides in mg/dl, mean (SD) | 139.80 (76.64) | 122.43 (64.20) | NS |
| HDL in mg/dl, mean (SD) | 52.49 (19.70) | 51.58 (12.53) | NS |
| LDL in mg/dl, mean (SD) | 124.25 (44.91) | 127.45 (40.58) | NS |
N = 175.
BMI = body mass index, CCB = calcium channel blocker, eGFR = estimated glomerular filtration rate, HDL = high-density lipoprotein, IHD = ischemic heart disease, LDL = low-density lipoprotein, NS = not significant, SD = standard deviation.
Significance set at P < .05 using either Chi-Squared test or t test.
Univariate logistic regression of 9 genetic variants.
| Allele frequencies, %∗ | Genotypic frequencies, %∗ | ||||||||||||
| Variants | Chr | Gene | Variant role | Risk allele (A) | A | a | AA | Aa | aa | Genotype | Crude OR (95% CI) | ||
| rs12046278 | 1 |
| intron variant | T | 40.77 | 59.23 | 18.46 | 44.62 | 36.92 | TC vs CC | 2.45 | (1.24, 4.84) | .010 |
| 21.82 | 78.18 | 6.36 | 30.91 | 62.73 | TT vs CC | 4.93 | (1.74, 13.96) | .003 | |||||
| rs13420028 | 1 |
| intron variant | T | 87.69 | 12.31 | 76.92 | 21.54 | 1.54 | TG vs GG | 6.80 | (0.82, 56.08) | .075 |
| 68.64 | 31.36 | 52.73 | 31.82 | 15.45 | TT vs GG | 14.66 | (1.88, 114.06) | .010 | |||||
| rs1458038 | 4 |
| intergenic | T | 49.23 | 50.77 | 27.69 | 43.08 | 29.23 | TC vs CC | 3.66 | (1.77, 7.55) | <.001 |
| 21.36 | 78.64 | 8.18 | 26.36 | 65.45 | TT vs CC | 7.58 | (2.94, 19.53) | <.001 | |||||
| rs16982520 | 20 |
| intron variant | A | 91.54 | 8.46 | 86.15 | 10.77 | 3.08 | AG vs GG | 1.45 | (0.26, 8.00) | .671 |
| 75.91 | 24.09 | 62.73 | 26.36 | 10.91 | AA vs GG | 4.87 | (1.05, 22.67) | .044 | |||||
| rs653178 | 12 |
| intron variant | A | 86.92 | 13.08 | 81.54 | 10.77 | 7.69 | AA vs AG/GG | 3.55 | (1.71, 7.37) | .001 |
| 70.91 | 29.09 | 55.45 | 30.91 | 13.64 | |||||||||
| rs776746 | 7 |
| splice acceptor | G | 66.92 | 33.08 | 47.69 | 38.46 | 13.85 | AG vs AA | 3.44 | (1.43, 8.23) | .006 |
| 40.00 | 60.00 | 22.73 | 34.55 | 42.73 | GG vs AA | 6.48 | (2.67, 15.72) | < .001 | |||||
| rs9350602 | 6 |
| intron variant | C | 90.77 | 9.23 | 84.62 | 12.31 | 3.08 | TC vs TT | 1.87 | (0.35, 9.96) | .465 |
| 73.64 | 26.36 | 60.00 | 27.27 | 12.73 | CC vs TT | 5.83 | (1.27, 26.78) | .023 | |||||
| rs11780975 | 8 |
| intergenic | C | 96.92 | 3.08 | 93.85 | 6.15 | 0.00 | AC vs AA | 0.48 | (0.04, +inf) | > .999 |
| 84.09 | 15.91 | 70.91 | 26.36 | 2.73 | CC vs AA | 2.95 | (0.31, +inf) | .365 | |||||
| rs1799945 | 6 |
| missense | C | 96.15 | 3.85 | 92.31 | 7.69 | 0.00 | GC vs GG | 2.24 | (0.27, +inf) | .497 |
| 81.82 | 17.27 | 71.82 | 20.00 | 7.27 | CC vs GG | 8.22 | (1.23, +inf) | .026 | |||||
a = non-risk allele, A = risk allele, ATXN2 = ataxin 2, CASZ1 = castor zinc finger 1, Chr = chromosome, CI = confidence interval, CYP3A5 = cytochrome P450 family 3 subfamily A member 5, FGF5 = fibroblast growth factor 5, GPR39 = G protein-coupled receptor 39, MYO6 = myosin VI, OR = odds ratio, ZNF831 = zinc finger protein 831.
All variants exhibit an additive model of inheritance, except for rs653178.
The upper values in the frequency columns are frequencies among cases, while the lower values are frequencies among controls.
Significance set at P < .05 on simple univariate logistic regression analysis, except for rs11780975 and rs1799945 which were analyzed using exact logistic regression analysis due to empty cells.
Simple logistic regression of significant clinical factors.
| Clinical Factors | Frequency in cases, % (n) | Frequency in controls, % (n) | Crude OR | (95% CI) | |
| Age ≥ 60 years | 49.23 (32) | 43.64 (48) | 1.25 | (0.68, 2.32) | .473 |
| Male sex | 43.08 (28) | 40.00 (44) | 1.13 | (0.61,2.11) | .689 |
| Dyslipidemia | 80.00 (52) | 69.09 (76) | 1.79 | (0.86, 3.71) | .118 |
| Type 2 diabetes mellitus | 43.08 (28) | 21.82 (24) | 2.71 | (1.39, 5.29) | .003 |
| Ischemic heart disease | 24.62 (16) | 5.50 (6) | 5.61 | (2.06, 15.21) | .001 |
| Stroke | 24.62 (16) | 15.45 (17) | 1.78 | (0.83, 3.84) | .137 |
| Lifestyle Factors | |||||
| Smoking | 40.00 (26) | 30.00 (33) | 1.56 | (0.82, 2.96) | .178 |
| Alcohol | 60.00 (39) | 50.91 (56) | 1.45 | (0.78, 2.70) | .244 |
BMI = body mass index, CI = confidence interval, IHD = ischemic heart disease, OR = odds ratio.
Genetic variants and clinical factors in the multiple regression full model.
| Factors | Frequency among cases, % (n) N = 65 | Frequency among controls, % (n) N = 110 | Adjusted odds ratio | 95% CI | |
| Dyslipidemia | 80.00 (52) | 69.09 (76) | 1.45 | (0.57, 3.69) | .439 |
| Type 2 DM | 43.08 (28) | 21.82 (24) | 1.99 | (0.84, 4.67) | .116 |
| Smoking | 40.00 (26) | 30.00 (33) | 1.24 | (0.58, 2.69) | .579 |
| rs12046278 (T) | (0.72, 8.39) | .151 | |||
| TT | 18.46 (12) | 6.36 (7) | 2.46 (TT vs CC) | ||
| TC | 44.62 (29) | 30.91 (34) | 1.43 (TC vs CC) | (0.63, 3.25) | .396 |
| CC | 36.92 (24) | 62.73 (69) | |||
| rs13420028 (T) | (0.73, 62.96) | .92 | |||
| TT | 76.92 (50) | 52.73 (58) | 6.79 (TT vs GG) | ||
| TG | 21.54 (14) | 31.82 (35) | 5.45 (TG vs GG) | (0.58, 51.39) | .138 |
| GG | 1.54 (1) | 15.45 (17) | |||
| rs1458038 (T) | (0.77, 10.11) | .120 | |||
| TT | 27.69 (18) | 8.18 (9) | 2.78 (TT vs CC) | ||
| TC | 43.08 (28) | 26.36 (29) | 1.61 (TC vs CC) | (0.54, 4.84) | .396 |
| CC | 29.23 (19) | 65.45 (72) | |||
| rs16982520 (A) | (0.20, 7.19) | .850 | |||
| AA | 86.15 (56) | 62.73 (69) | 1.19 (AA vs GG) | ||
| AG | 10.77 (7) | 26.36 (29) | 1.39 (AG vs GG) | (0.22, 8.79) | .726 |
| GG | 3.08 (2) | 10.91 (12) | |||
| rs653178 (A) | (0.18, 2.77) | .608 | |||
| AA | 81.54 (53) | 55.45 (61) | 0.70 (AA vs AG and GG) | ||
| AG and GG | 18.46 (12) | 44.55 (49) | |||
| rs776746 (G) | (0.87, 9.13) | .084 | |||
| GG | 47.69 (31) | 22.73 (25) | 2.82 (GG vs AA) | ||
| AG | 38.46 (25) | 34.55 (38) | 1.68 (AG vs AA) | (0.56, 5.03) | .351 |
| AA | 13.85 (9) | 42.73 (47) | |||
| rs9350602 (C) | (0.33, 12.13) | .445 | |||
| CC | 84.62 (55) | 60.00 (66) | 2.01 (CC vs TT) | ||
| TC | 12.31 (8) | 27.27 (30) | 1.42 (TC vs TT) | (0.23, 8.82) | .707 |
| TT | 3.08 (2) | 12.73 (14) |
BMI = body mass index, CI = confidence interval.
Genetic variants and clinical factors remaining after variable selection.
| Factors | Frequency in cases, % (n) | Frequency in controls, % (n) | Adjusted OR (95% CI) | |
| rs1458038 (T) | < .001 | |||
| TT | 27.69 (18) | 8.18 (9) | 6.72 (2.56, 17.58) (TT vs CC) | |
| TC | 43.08 (28) | 26.36 (29) | 3.41 (1.63, 7.11) (TC vs CC) | .001 |
| CC | 29.23 (19) | 65.45 (72) | ||
| Type 2 DM | 2.23 (1.09, 4.55) | .028 |
CI = confidence interval, OR = odds ratio.
Significance set at P < .05.