Literature DB >> 35113400

Cataloging Posttranslational Modifications in Plant Histones.

Ericka Zacarias1, J Armando Casas-Mollano2,3.   

Abstract

Eukaryotic DNA exist in the nuclei in the form of a complex with proteins called chromatin. Access to the information encoded in the DNA requires the opening of the chromatin. Modulation of the chromatin structure is therefore an important layer of regulation for DNA-templated processes. The basic unit of the chromatin is the nucleosome, which contains DNA wrapped around an octamer of histones, H2A, H2B, H3, and H4. Because histones are a structural part of the nucleosome, its modification can lead to changes in chromatin structure. Amino acid residues in histones could be modified with at least 20 different types of functional groups leading to a vast number of modified residues. Here, an overview of the histone modifications found in plants is provided. We focus mainly in proteomic-based studies either aimed to identify PTMs on purified histones or proteome-wide analysis of particular modifications. The strategies used for cataloging modifications in plants are also described. Profiling of histone modifications is important to begin to understand their functions as mediators of gene regulation in plant biological systems.
© 2021. Springer Nature Switzerland AG.

Entities:  

Keywords:  Acetylation; Acylation; Chromatin; Core histones; Histone modifications; Mass spectrometry; Methylation; Proteomics

Mesh:

Substances:

Year:  2021        PMID: 35113400     DOI: 10.1007/978-3-030-80352-0_8

Source DB:  PubMed          Journal:  Adv Exp Med Biol        ISSN: 0065-2598            Impact factor:   2.622


  90 in total

1.  N-terminal alpha-methylation of RCC1 is necessary for stable chromatin association and normal mitosis.

Authors:  Ting Chen; Tara L Muratore; Christine E Schaner-Tooley; Jeffrey Shabanowitz; Donald F Hunt; Ian G Macara
Journal:  Nat Cell Biol       Date:  2007-04-15       Impact factor: 28.824

Review 2.  The complex language of chromatin regulation during transcription.

Authors:  Shelley L Berger
Journal:  Nature       Date:  2007-05-24       Impact factor: 49.962

Review 3.  Histone modifications in transcriptional activation during plant development.

Authors:  Alexandre Berr; Sarfraz Shafiq; Wen-Hui Shen
Journal:  Biochim Biophys Acta       Date:  2011-07-14

4.  α-N-methylation of damaged DNA-binding protein 2 (DDB2) and its function in nucleotide excision repair.

Authors:  Qian Cai; Lijuan Fu; Zi Wang; Nanqin Gan; Xiaoxia Dai; Yinsheng Wang
Journal:  J Biol Chem       Date:  2014-04-21       Impact factor: 5.157

5.  Involvement of Arabidopsis histone deacetylase HDA6 in ABA and salt stress response.

Authors:  Li-Ting Chen; Ming Luo; Yu-Yuan Wang; Keqiang Wu
Journal:  J Exp Bot       Date:  2010-06-02       Impact factor: 6.992

6.  Characterization of post-translational modifications of histone H2B-variants isolated from Arabidopsis thaliana.

Authors:  Eveline Bergmüller; Peter M Gehrig; Wilhelm Gruissem
Journal:  J Proteome Res       Date:  2007-08-11       Impact factor: 4.466

7.  Initial characterization of histone H3 serine 10 O-acetylation.

Authors:  Laura-Mae P Britton; Alyshia Newhart; Natarajan V Bhanu; Rupa Sridharan; Michelle Gonzales-Cope; Kathrin Plath; Susan M Janicki; Benjamin A Garcia
Journal:  Epigenetics       Date:  2013-08-15       Impact factor: 4.528

8.  Histone H2B monoubiquitination facilitates the rapid modulation of gene expression during Arabidopsis photomorphogenesis.

Authors:  Clara Bourbousse; Ikhlak Ahmed; François Roudier; Gérald Zabulon; Eddy Blondet; Sandrine Balzergue; Vincent Colot; Chris Bowler; Fredy Barneche
Journal:  PLoS Genet       Date:  2012-07-19       Impact factor: 5.917

9.  The Taf14 YEATS domain is a reader of histone crotonylation.

Authors:  Forest H Andrews; Stephen A Shinsky; Erin K Shanle; Joseph B Bridgers; Anneliese Gest; Ian K Tsun; Krzysztof Krajewski; Xiaobing Shi; Brian D Strahl; Tatiana G Kutateladze
Journal:  Nat Chem Biol       Date:  2016-04-18       Impact factor: 15.040

10.  Genome-wide association of histone H3 lysine nine methylation with CHG DNA methylation in Arabidopsis thaliana.

Authors:  Yana V Bernatavichute; Xiaoyu Zhang; Shawn Cokus; Matteo Pellegrini; Steven E Jacobsen
Journal:  PLoS One       Date:  2008-09-08       Impact factor: 3.240

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  1 in total

Review 1.  Methylation hallmarks on the histone tail as a linker of osmotic stress and gene transcription.

Authors:  Mu Xiao; Jinbiao Wang; Fang Xu
Journal:  Front Plant Sci       Date:  2022-08-10       Impact factor: 6.627

  1 in total

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