Literature DB >> 35107280

Temperature Regulates Stability, Ligand Binding (Mg2+ and ATP), and Stoichiometry of GroEL-GroES Complexes.

Thomas E Walker1, Mehdi Shirzadeh1, He Mirabel Sun1, Jacob W McCabe1, Andrew Roth2, Zahra Moghadamchargari1, David E Clemmer3, Arthur Laganowsky1, Hays Rye2, David H Russell1.   

Abstract

Chaperonins are nanomachines that harness ATP hydrolysis to power and catalyze protein folding, a chemical action that is directly linked to the maintenance of cell function through protein folding/refolding and assembly. GroEL and the GroEL-GroES complex are archetypal examples of such protein folding machines. Here, variable-temperature electrospray ionization (vT-ESI) native mass spectrometry is used to delineate the effects of solution temperature and ATP concentrations on the stabilities of GroEL and GroEL-GroES complexes. The results show clear evidence for destabilization of both GroEL14 and GroES7 at temperatures of 50 and 45 °C, respectively, substantially below the previously reported melting temperature (Tm ∼ 70 °C). This destabilization is accompanied by temperature-dependent reaction products that have previously unreported stoichiometries, viz. GroEL14-GroESy-ATPn, where y = 1, 2, 8 and n = 0, 1, 2, 8, that are also dependent on Mg2+ and ATP concentrations. Variable-temperature native mass spectrometry reveals new insights about the stability of GroEL in response to temperature effects: (i) temperature-dependent ATP binding to GroEL; (ii) effects of temperature as well as Mg2+ and ATP concentrations on the stoichiometry of the GroEL-GroES complex, with Mg2+ showing greater effects compared to ATP; and (iii) a change in the temperature-dependent stoichiometries of the GroEL-GroES complex (GroEL14-GroES7 vs GroEL14-GroES8) between 24 and 40 °C. The similarities between results obtained by using native MS and cryo-EM [Clare et al. An expanded protein folding cage in the GroEL-gp31 complex. J. Mol. Biol. 2006, 358, 905-911; Ranson et al. Allosteric signaling of ATP hydrolysis in GroEL-GroES complexes.Nat. Struct. Mol. Biol. 2006, 13, 147-152] underscore the utility of native MS for investigations of molecular machines as well as identification of key intermediates involved in the chaperonin-assisted protein folding cycle.

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Year:  2022        PMID: 35107280      PMCID: PMC8939001          DOI: 10.1021/jacs.1c11341

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  71 in total

1.  Nucleotide binding to the chaperonin GroEL: non-cooperative binding of ATP analogs and ADP, and cooperative effect of ATP.

Authors:  T Inobe; T Makio; E Takasu-Ishikawa; T P Terada; K Kuwajima
Journal:  Biochim Biophys Acta       Date:  2001-02-09

2.  Polypeptide in the chaperonin cage partly protrudes out and then folds inside or escapes outside.

Authors:  Fumihiro Motojima; Masasuke Yoshida
Journal:  EMBO J       Date:  2010-10-19       Impact factor: 11.598

3.  Crystal structure of a GroEL-ADP complex in the relaxed allosteric state at 2.7 Å resolution.

Authors:  Xue Fei; Dong Yang; Nicole LaRonde-LeBlanc; George H Lorimer
Journal:  Proc Natl Acad Sci U S A       Date:  2013-07-16       Impact factor: 11.205

4.  Melting Proteins: Evidence for Multiple Stable Structures upon Thermal Denaturation of Native Ubiquitin from Ion Mobility Spectrometry-Mass Spectrometry Measurements.

Authors:  Tarick J El-Baba; Daniel W Woodall; Shannon A Raab; Daniel R Fuller; Arthur Laganowsky; David H Russell; David E Clemmer
Journal:  J Am Chem Soc       Date:  2017-04-26       Impact factor: 15.419

5.  Nested cooperativity in the ATPase activity of the oligomeric chaperonin GroEL.

Authors:  O Yifrach; A Horovitz
Journal:  Biochemistry       Date:  1995-04-25       Impact factor: 3.162

6.  Determining Membrane Protein-Lipid Binding Thermodynamics Using Native Mass Spectrometry.

Authors:  Xiao Cong; Yang Liu; Wen Liu; Xiaowen Liang; David H Russell; Arthur Laganowsky
Journal:  J Am Chem Soc       Date:  2016-03-25       Impact factor: 15.419

7.  Chaperonin-facilitated refolding of ribulosebisphosphate carboxylase and ATP hydrolysis by chaperonin 60 (groEL) are K+ dependent.

Authors:  P V Viitanen; T H Lubben; J Reed; P Goloubinoff; D P O'Keefe; G H Lorimer
Journal:  Biochemistry       Date:  1990-06-19       Impact factor: 3.162

8.  Fluorescence detection of conformational changes in GroEL induced by thermal switching and nucleotide binding.

Authors:  J E Hansen; A Gafni
Journal:  J Biol Chem       Date:  1994-03-04       Impact factor: 5.157

Review 9.  THE IMS PARADOX: A PERSPECTIVE ON STRUCTURAL ION MOBILITY-MASS SPECTROMETRY.

Authors:  Jacob W McCabe; Michael J Hebert; Mehdi Shirzadeh; Christopher S Mallis; Joanna K Denton; Thomas E Walker; David H Russell
Journal:  Mass Spectrom Rev       Date:  2020-07-01       Impact factor: 10.946

10.  Variable-Temperature Electrospray Ionization for Temperature-Dependent Folding/Refolding Reactions of Proteins and Ligand Binding.

Authors:  Jacob W McCabe; Mehdi Shirzadeh; Thomas E Walker; Cheng-Wei Lin; Benjamin J Jones; Vicki H Wysocki; David P Barondeau; David E Clemmer; Arthur Laganowsky; David H Russell
Journal:  Anal Chem       Date:  2021-04-27       Impact factor: 6.986

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  2 in total

1.  Surface Activity of Amines Provides Evidence for the Combined ESI Mechanism of Charge Reduction for Protein Complexes.

Authors:  Thomas E Walker; Arthur Laganowsky; David H Russell
Journal:  Anal Chem       Date:  2022-07-21       Impact factor: 8.008

2.  Thermodynamic coupling between neighboring binding sites in homo-oligomeric ligand sensing proteins from mass resolved ligand-dependent population distributions.

Authors:  Weicheng Li; Andrew S Norris; Katie Lichtenthal; Skyler Kelly; Elihu C Ihms; Paul Gollnick; Vicki H Wysocki; Mark P Foster
Journal:  Protein Sci       Date:  2022-10       Impact factor: 6.993

  2 in total

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