| Literature DB >> 35104010 |
Malene Risum1, Rasmus Krøger Hare1, Jan Berg Gertsen2, Lise Kristensen2, Flemming Schønning Rosenvinge3, Sofia Sulim4, Nissrine Abou-Chakra1, Jette Bangsborg5, Bent Løwe Røder6, Ea Sofie Marmolin7, Karen Marie Thyssen Astvad1,8, Michael Pedersen8, Esad Dzajic9, Steen Lomborg Andersen10, Maiken Cavling Arendrup1,11,12.
Abstract
BACKGROUND: Azole resistance complicates treatment of patients with invasive aspergillosis with an increased mortality. Azole resistance in Aspergillus fumigatus is a growing problem and associated with human and environmental azole use. Denmark has a considerable and highly efficient agricultural sector. Following reports on environmental azole resistance in A. fumigatus from Danish patients, the ministry of health requested a prospective national surveillance of azole-resistant A. fumigatus and particularly that of environmental origin.Entities:
Keywords: zzm321990Aspergillus fumigatuszzm321990; TR34/L98H; antifungal susceptibility; azole resistance; environmental route; itraconazole; medical route; voriconazole
Mesh:
Substances:
Year: 2022 PMID: 35104010 PMCID: PMC9302650 DOI: 10.1111/myc.13426
Source DB: PubMed Journal: Mycoses ISSN: 0933-7407 Impact factor: 4.931
Number of patients and sample types with Aspergillus fumigatus isolates
| Clinical samples |
Samples marked Background samples | Total | Proportion of resistant isolates | |
|---|---|---|---|---|
| Male/Female ( | 527/462 | 48/46 | 575/508 | — |
| Isolates ( | 1721 | 99 | 1820 | — |
| Sample type ( | ||||
| Sputum samples/sinus/nose | 1113 | 52 | 1165 | 8.5% (99/1165) |
| Tracheal aspirate | 155 | 21 | 166 | 3.6% (6/166) |
| BAL/Pleura fluid/Lung/Lung biopsy | 167 | 11 | 278 | 4.3% (12/278) |
| Other deep samples | 12 | 12 | 8.3% (1/12) | |
| Ear | 168 | 14 | 182 | 0.5% (1/182) |
| Cornea/Eye swab | 6 | 6 | Not detected | |
| Tissues not specified/scar/puncture site | 10 | 1 | 11 | Not detected |
Includes samples marked as sputum/laryngeal aspirate, sinus, nose/nose vestibule biopsy/nasal aspirate/nose‐throat.
Includes samples marked as BAL/bronchial aspirate/pleura fluid and lung biopsy/lung/pleura.
Cerebrospinal fluid, abscess/drain fluid/drain/abdominal swab, biopsy abdominal/biopsy organ not specified/pericardium/pericardial fluid and bone.
FIGURE 1MIC values for the included Aspergillus fumigatus isolates. Susceptible isolates (S) are shown green when susceptible at azole resistance screening. Susceptible isolates with an MIC are shown in blue, resistant isolates in red and isolates in the ATU for which the classification depends on the susceptibility of either itraconazole or voriconazole, respectively, are indicated in black. MIC values above 4 mg/L are shown as >4 mg/L. Isolates with no MICs for posaconazole (n = 1) and isavuconazole (n = 365) are not included in the diagrams
FIGURE 2Cyp51A amino acid profiles found in the 66 patients with at least one resistant isolate. Each patient is shown only once. Some patients harbour resistant isolates with a Cyp51A resistance mechanism and resistant isolates with a non‐Cyp51A related mechanism (WT) (for example the two patients with P216S and wild‐type isolates)
MIC values for Aspergillus fumigatus isolates resistant to at least one azole and which underwent cyp51A sequencing
| Resistance mechanism | Isolates ( | MIC medians and ranges (mg/L) | |||
|---|---|---|---|---|---|
| ITR | POS | VOR | ISA | ||
| Environmental | |||||
| TR34/L98H | 50 | >16 (2–>16) | 0.5/1 (0.5–>4) | 4 (2–16) | 8 (4–>16) |
| TR34 3/L98H | 4 | >16 | 1 (1–2) | 8 (4–8) | 16 |
| TR34/L98H/S297T/F495I | 1 | >16 | 2 | 4 | >16 |
| Single point mutations | |||||
| Y121F | 2 | >4–>16 | 1–4 | >4–>16 | >8 |
| G448S | 2 | >4 | (0.5–1) | >4 | >8 |
| G432S | 3 | >4 (>4–>16) | 2 (0.5–4) | 4 (2–4) | 8 (4–16) |
| M220R | 4 | >4/>16 (>4–>16) | 1/4 (0.5–>4) | 2/4 (1–4) | 4/8 (4–8) |
| M220K | 9 | >16 (4–>16) | 2 (1–>4) | 2 (1–2) | 2 (1–2) |
| M220I | 1 | >16 | 0.5 | 0.5 | 2 |
| G54R | 6 | >16 (>4–>16) | 4 (2–>4) | 1 (0.25–4) | 2 (0.5–4) |
| G54W | 1 | >16 | >4 | 0.5 | 0.5 |
| F219L | 1 | >4 | 0.5 | 1 | 2 |
| P216S | 3 | 2–>16 | 0.25–0.5 | 1 | 1 |
| Non‐ | 27 | 2 (0.5–>16) | 0.25 (0.125–2) | 2 (1–4) | 4 (2–8) |
Resistance mechanisms are shown according to environmental, single point mutations and non‐cyp51A‐mediated. Single point mutations are shown according to decreasing resistance.
Abbreviations: ISA, Isavuconazole; ITR, Itraconazole; POS, Posaconazole; VOR, Voriconazole.
One resistant isolate is not shown in this table since it was found with a F46Y/M172V/E427K, which is not associated with azole resistance, and the same patient had other resistant isolates with TR34/L98H. Four isolates did not undergo cyp51A‐sequencing and are not shown in the table
One isolate with TR34/L98H was mixed with a wild‐type isolate resulting in lower MICs than normally observed for TR34/L98H.
One resistant isolate with N248K was classified as non‐cyp51A‐mediated since this mutation is not associated with azole resistance, and since same patient had another resistant isolate with no detected cyp51A‐mediated resistance.
FIGURE 3Proportion of resistant Aspergillus fumigatus isolates and associated underlying resistance mechanism across the five Danish Regions. Each Region represented is the Region of the health care facility from which the isolate was referred. As some health care services are centralised this will not in all cases represent the patients' place of residence or the place where the resistant fungus was acquired. Total numbers of isolates were for Capital n = 910, Zealand n = 91, Southern Denmark n = 326, Central Jutland n = 419 and Northern Jutland n = 74. The resistance mechanism remained uncharacterised in five isolates from five patients whom were known to harbour other cyp51A mutant isolates (blue bar). These included four resistant isolates that did not undergo cyp51A sequencing of which three isolates derived from a patient who had other isolates with M220K, and one isolate from a patient who had other isolates with P216S, and one isolate with F46Y/M172/E427K from a patient who also had isolates with TR34/L98H
Studies and surveillances with azole resistance in Aspergillus fumigatus
| Country and study period | Study type/Setting | Azole resistance prevalence |
TR34/L98H and/or TR46/Y121F proportion of resistance |
|---|---|---|---|
| Europe | |||
|
Denmark 2007 (Mortensen et al.) | Nationwide surveillance 3‐month |
1.9% isolate level (2/107) | Not detected |
|
The Netherlands 2013–2018 (Lestrade et al.) | Nationwide surveillance |
11.3% patient level (508/4496) | 556/640 of resistant isolates |
|
The Netherlands 2007–2009 (Van der linden et al.) | Multicentre study |
5.3% patient level (63/1192) 4.6% isolate level (82/1792) |
4.1% isolate level (74/1792) |
|
Belgium 2011–2012 (Vermeulen et al.) | Multicentre study |
5.5% patient level (9/164) |
4.3% patient level (7/164) |
|
Spain 2019 (Escribano et al.) | Multicentre study |
4.7% patient level (34/715) |
2.8% patient level (20/715) |
|
Italy 2016–2018 (Prigitano et al.) | Multicentre study |
6.6% isolate level (19/286) |
4.2% isolate level (12/286) |
| North America | |||
|
USA 2015–2017 (Berkow et al.) | Multicentre study/surveillance |
1.5% isolate level (20/1356) |
0.4% isolate level (5/1356) |
| Asia | |||
|
Japan 2017–2018 (Tsuchido et al.) | Multicentre surveillance |
12.7% isolate level (7/55) |
3.6% isolate level (2/55) |
|
Taiwan 2011–2018 (Wu et al.) | Multicentre study |
4% patient level (12/297) 5.1% isolate level (19/375) |
3.4% patient level (10/297) 3.5% isolate level (13/375) |
|
China 2010–2015 (Chen et al.) | Multicentre surveillance |
2.5% isolate level (8/317) |
2.5% isolate level (8/317) |
Studies shown involve those who are either nationwide surveillances or multicentre studies in one country and not limited to a certain patient group or a referral hospital. Studies included are those that report azole resistance in A. fumigatus specifically. Azole resistance in A. fumigatus prevalence is shown in numbers of patients unless other specified.
Numbers of patients with either TR34/L98H or TR46/Y121F were not specified, and total number of isolates was not specified.