Literature DB >> 35102425

Volatile and Dissolved Organic Carbon Sources Have Distinct Effects on Microbial Activity, Nitrogen Content, and Bacterial Communities in Soil.

Steven G McBride1,2, Ernest D Osburn3,4, Jane M Lucas4,5, Julia S Simpson3,6, Taylor Brown3, J E Barrett3, Michael S Strickland4.   

Abstract

Variation in microbial use of soil carbon compounds is a major driver of biogeochemical processes and microbial community composition. Available carbon substrates in soil include both low molecular weight-dissolved organic carbon (LMW-DOC) and volatile organic compounds (VOCs). To compare the effects of LMW-DOC and VOCs on soil chemistry and microbial communities under different moisture regimes, we performed a microcosm experiment with five levels of soil water content (ranging from 25 to 70% water-holding capacity) and five levels of carbon amendment: a no carbon control, two dissolved compounds (glucose and oxalate), and two volatile compounds (methanol and α-pinene). Microbial activity was measured throughout as soil respiration; at the end of the experiment, we measured extractable soil organic carbon and total extractable nitrogen and characterized prokaryotic communities using amplicon sequencing. All C amendments increased microbial activity, and all except oxalate decreased total extractable nitrogen. Likewise, individual phyla responded to specific C amendments-e.g., Proteobacteria increased under addition of glucose, and both VOCs. Further, we observed an interaction between moisture and C amendment, where both VOC treatments had higher microbial activity than LMW-DOC treatments and controls at low moisture. Across moisture and C treatments, we identified that Chloroflexi, Nitrospirae, Proteobacteria, and Verrucomicrobia were strong predictors of microbial activity, while Actinobacteria, Bacteroidetes, and Thaumarcheota strongly predicted soil extractable nitrogen. These results indicate that the type of labile C source available to soil prokaryotes can influence both microbial diversity and ecosystem function and that VOCs may drive microbial functions and composition under low moisture conditions.
© 2022. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.

Entities:  

Keywords:  Amplicon sequencing; Dissolved organic carbon; Microbial community composition

Year:  2022        PMID: 35102425     DOI: 10.1007/s00248-022-01967-0

Source DB:  PubMed          Journal:  Microb Ecol        ISSN: 0095-3628            Impact factor:   4.552


  15 in total

1.  Toward an ecological classification of soil bacteria.

Authors:  Noah Fierer; Mark A Bradford; Robert B Jackson
Journal:  Ecology       Date:  2007-06       Impact factor: 5.499

2.  Responses of soil bacterial and fungal communities to extreme desiccation and rewetting.

Authors:  Romain L Barnard; Catherine A Osborne; Mary K Firestone
Journal:  ISME J       Date:  2013-07-04       Impact factor: 10.302

Review 3.  Belowground volatiles facilitate interactions between plant roots and soil organisms.

Authors:  Katrin Wenke; Marco Kai; Birgit Piechulla
Journal:  Planta       Date:  2009-12-15       Impact factor: 4.116

4.  Volatile organic compounds from leaf litter decomposition alter soil microbial communities and carbon dynamics.

Authors:  Steven G McBride; Mallory Choudoir; Noah Fierer; Michael S Strickland
Journal:  Ecology       Date:  2020-09-22       Impact factor: 5.499

5.  Historical climate controls soil respiration responses to current soil moisture.

Authors:  Christine V Hawkes; Bonnie G Waring; Jennifer D Rocca; Stephanie N Kivlin
Journal:  Proc Natl Acad Sci U S A       Date:  2017-05-30       Impact factor: 11.205

6.  Denitrification potential and its relation to organic carbon quality in three coastal wetland soils.

Authors:  Syam K Dodla; Jim J Wang; Ron D DeLaune; Robert L Cook
Journal:  Sci Total Environ       Date:  2008-10-10       Impact factor: 7.963

7.  Metabolism of monoterpene alcohol, linalool, by a soil pseudomonad.

Authors:  K Madyastha; P K Bhattacharyya; C S Vaidyanathan
Journal:  Can J Microbiol       Date:  1977-03       Impact factor: 2.419

8.  The SILVA ribosomal RNA gene database project: improved data processing and web-based tools.

Authors:  Christian Quast; Elmar Pruesse; Pelin Yilmaz; Jan Gerken; Timmy Schweer; Pablo Yarza; Jörg Peplies; Frank Oliver Glöckner
Journal:  Nucleic Acids Res       Date:  2012-11-28       Impact factor: 16.971

9.  The expanded diversity of methylophilaceae from Lake Washington through cultivation and genomic sequencing of novel ecotypes.

Authors:  David A C Beck; Tami L McTaggart; Usanisa Setboonsarng; Alexey Vorobev; Marina G Kalyuzhnaya; Natalia Ivanova; Lynne Goodwin; Tanja Woyke; Mary E Lidstrom; Ludmila Chistoserdova
Journal:  PLoS One       Date:  2014-07-24       Impact factor: 3.240

10.  Biogenic volatile release from permafrost thaw is determined by the soil microbial sink.

Authors:  Magnus Kramshøj; Christian N Albers; Thomas Holst; Rupert Holzinger; Bo Elberling; Riikka Rinnan
Journal:  Nat Commun       Date:  2018-08-24       Impact factor: 14.919

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