| Literature DB >> 35098576 |
Audinga-Dea Hazewinkel1,2, Jack Bowden2,3, Kaitlin H Wade1,2, Tom Palmer1,2, Nicola J Wiles4, Kate Tilling1,2.
Abstract
Outcome values in randomized controlled trials (RCTs) may be missing not at random (MNAR), if patients with extreme outcome values are more likely to drop out (eg, due to perceived ineffectiveness of treatment, or adverse effects). In such scenarios, estimates from complete case analysis (CCA) and multiple imputation (MI) will be biased. We investigate the use of the trimmed means (TM) estimator for the case of univariable missingness in one continuous outcome. The TM estimator operates by setting missing values to the most extreme value, and then "trimming" away equal fractions of both groups, estimating the treatment effect using the remaining data. The TM estimator relies on two assumptions, which we term the "strong MNAR" and "location shift" assumptions. We derive formulae for the TM estimator bias resulting from the violation of these assumptions for normally distributed outcomes. We propose an adjusted TM estimator, which relaxes the location shift assumption and detail how our bias formulae can be used to establish the direction of bias of CCA and TM estimates, to inform sensitivity analyses. The TM approach is illustrated in a sensitivity analysis of the CoBalT RCT of cognitive behavioral therapy (CBT) in 469 individuals with 46 months follow-up. Results were consistent with a beneficial CBT treatment effect, with MI estimates closer to the null and TM estimates further from the null than the CCA estimate. We propose using the TM estimator as a sensitivity analysis for data where extreme outcome value dropout is plausible.Entities:
Keywords: bias quantification; dropout; missing not at random; randomized controlled trials; sensitivity analyses; trimmed means
Mesh:
Year: 2022 PMID: 35098576 PMCID: PMC9303448 DOI: 10.1002/sim.9299
Source DB: PubMed Journal: Stat Med ISSN: 0277-6715 Impact factor: 2.497
Estimated treatment effects () for the CCA (), TM (), and adjusted TM () estimators, with the latter obtained by performing the adjustment on the comparator group () and the treatment group ()
| Dropout spread |
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| (a) | ||||||||||
| 1) |
| 0.15 | 0.50 | 0.50 | 0.50 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
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| 0.02 | 0.02 | 0.03 | 0.03 | 0.02 | 0.02 | 0.02 | 0.03 | 0.03 | |
| 2) |
| 0.30 | 0.50 | 0.50 | 0.50 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
|
| 0.02 | 0.02 | 0.03 | 0.03 | 0.02 | 0.02 | 0.02 | 0.03 | 0.03 | |
| 3) |
| 0.40 | 0.56 | 0.64 | 0.70 | 0.00 | 0.06 | 0.06 | 0.14 | 0.20 |
|
| 0.02 | 0.02 | 0.03 | 0.03 | 0.02 | 0.02 | 0.02 | 0.03 | 0.03 | |
| 4) |
| 0.50 | 0.69 | 0.77 | 0.81 | 0.00 | 0.19 | 0.19 | 0.27 | 0.31 |
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| 0.02 | 0.02 | 0.03 | 0.03 | 0.02 | 0.02 | 0.02 | 0.03 | 0.03 | |
| (b) | ||||||||||
| 1) |
|
| 0.10 | 0.50 | 0.50 |
| 0.00 |
| 0.00 | 0.00 |
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| 0.03 | 0.03 | 0.03 | 0.03 | 0.03 | 0.03 | 0.03 | 0.03 | 0.03 | |
| 2) |
| 0.20 | 0.10 | 0.50 | 0.50 |
| 0.00 |
| 0.00 | 0.00 |
|
| 0.03 | 0.03 | 0.03 | 0.03 | 0.03 | 0.03 | 0.03 | 0.03 | 0.03 | |
| 3) |
| 0.34 | 0.19 | 0.70 | 0.82 |
| 0.09 |
| 0.20 | 0.32 |
|
| 0.03 | 0.03 | 0.04 | 0.04 | 0.03 | 0.03 | 0.03 | 0.04 | 0.04 | |
| 4) |
| 0.50 | 0.39 | 0.91 | 0.96 |
| 0.29 |
| 0.41 | 0.46 |
|
| 0.03 | 0.03 | 0.03 | 0.03 | 0.03 | 0.03 | 0.03 | 0.03 | 0.03 | |
Note: TM estimator bias when violating the location shift () and strong MNAR assumptions () are shown, alongside the total bias (), and the adjusted TM estimator biases (, ). Mean and SD estimates for simulations are reported. The TM estimands are estimated under 50% trimming of normally distributed outcomes (), for equal (a) and unequal (b) treatment group SDs, true treatment effect , and 20% comparator group dropout. Four scenarios are considered: dropouts restricted to (1) the lowest 20% of the distribution (), (2) the lowest 50%, (3) the lowest 75%, and (4) left unrestricted.
is defined in (7), Section 2.3.
is defined in (14), Section 2.4.
and equivalently .
, with further defined in (L14), Appendix L.3.
, with further defined in (L7), Appendix L.1.
Estimated treatment effects for the CCA (), TM (), and adjusted TM () estimator, with the latter obtained when performing the adjustment on the treatment group
| Equal SDs | Unequal SDs | ||||||||||
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| Normally distributed outcomes | |||||||||||
| I |
| 0.30 | 1.00 | 1.00 | 0.13 | 0.61 | 1.00 | 0.00 | 0.20 | ||
| SD | 0.13 | 0.15 | 0.14 | 0.15 | 0.16 | 0.16 | 0.00 | 0.00 | |||
| I (adj) |
| 0.45 | 1.00 | 1.00 | 0.25 | 0.58 | 0.97 | 0.00 | 0.20 | ||
| SD | 0.11 | 0.14 | 0.14 | 0.13 | 0.15 | 0.15 | 0.00 | 0.00 | |||
| II |
| 0.24 | 1.00 | 0.83 | 0.07 | 0.69 | 0.92 | 0.18 | 0.36 | ||
| SD | 0.15 | 0.17 | 0.19 | 0.16 | 0.18 | 0.19 | 0.02 | 0.02 | |||
| II (adj) |
| 0.39 | 1.00 | 0.83 | 0.18 | 0.66 | 0.89 | 0.18 | 0.36 | ||
| SD | 0.13 | 0.16 | 0.18 | 0.15 | 0.17 | 0.18 | 0.02 | 0.02 | |||
| Log‐normally distributed outcomes | |||||||||||
| I |
| 0.30 | 1.00 | 0.73 | 0.20 | 0.63 | 0.89 | 0.00 | 0.20 | ||
| SD | 0.14 | 0.19 | 0.15 | 0.07 | 0.10 | 0.10 | 0.00 | 0.00 | |||
| I (adj) |
| 0.46 | 1.00 | 0.73 | 0.33 | 0.61 | 0.86 | 0.00 | 0.20 | ||
| SD | 0.13 | 0.19 | 0.15 | 0.03 | 0.09 | 0.09 | 0.00 | 0.00 | |||
| II |
| 0.35 | 1.00 | 0.63 | 0.14 | 0.72 | 0.84 | 0.18 | 0.36 | ||
| SD | 0.15 | 0.19 | 0.16 | 0.09 | 0.14 | 0.16 | 0.02 | 0.02 | |||
| II (adj) |
| 0.54 | 1.00 | 0.63 | 0.27 | 0.70 | 0.82 | 0.18 | 0.36 | ||
| SD | 0.14 | 0.19 | 0.16 | 0.07 | 0.12 | 0.14 | 0.02 | 0.02 | |||
Note: Mean and SD estimates for simulations are reported. The TM estimands are estimated under 50% trimming of normally and log‐normally distributed outcomes (), for equal () and unequal (, ) treatment group SDs, true treatment effect , and 20% lower value comparator group dropout (). Two scenarios are considered: (I) the outcome, Y, is a function of treatment group and an additional continuous covariate, U; (II) the outcome, Y, is a function of treatment group and U, with U also affecting dropout, simulated via a logit missingness mechanism. Dropout proportions are shown for the treatment () and comparator () groups. Unadjusted CCA and TM estimates are obtained, alongside estimates adjusted (adj) for U in the regression.
Estimated treatment effects for the CCA () and TM () estimators in observed and imputed data
| Observed data | Imputed data | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| SE |
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| SE |
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| SE |
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| I | Est | 0.43 | 0.13 | 631 | 1.00 | 0.13 | 358 | 1.00 | 0.11 | 500 | 0.00 | 0.20 |
| SD | 0.13 | 0.00 | 13.34 | 0.15 | 0.01 | 9.79 | 0.14 | 0.01 | 0.00 | 0.00 | 0.00 | |
| II | Est | 0.39 | 0.14 | 510 | 1.00 | 0.14 | 358 | 1.00 | 0.12 | 500 | 0.18 | 0.36 |
| SD | 0.15 | 0.01 | 14.89 | 0.17 | 0.01 | 10.22 | 0.15 | 0.01 | 0.00 | 0.02 | 0.02 | |
Note: Mean and SD estimates for simulations are reported. The TM estimand is estimated under 50% trimming of normally distributed outcomes (), for equal () treatment group SDs, true treatment effect , and 20% lower value comparator group dropout (). In Scenario I, the outcome, Y, is a function of treatment group and an additional continuous covariate, U, with approx. 30% missingness in U as a function of treatment, simulated via a logit missingness mechanism. Scenario II is equivalent to I, but now U also affects dropout, simulated via a logit missingness mechanism. Estimated treatment effects are shown alongside SEs, and the number of cases used in estimation. and give the number of complete cases (U and Y not missing) in the observed and trimmed data, respectively. All estimates are adjusted for U, and data is imputed after 50% trimming.
Counts (N) and percentages (%) of patients with an observed BDI‐II score at baseline, 6, 12, and 46 months, for the usual care group (UC), the CBT treatment group (CBT), and both groups
| UC | CBT | Total | ||||
|---|---|---|---|---|---|---|
| N | % | N | % | N | % | |
| Base | 235 | 100 | 234 | 100 | 469 | 100 |
| 6 months | 213 | 90.6 | 206 | 88.0 | 419 | 89.3 |
| 12 months | 198 | 84.3 | 197 | 84.2 | 395 | 84.2 |
| 46 months | 112 | 47.7 | 136 | 58.1 | 248 | 52.9 |
Mean BDI‐II measurements and SDs at baseline, 6, 12, and 46 months for the usual care group (UC) and the CBT treatment group
| Usual care (UC) | CBT | |||||
|---|---|---|---|---|---|---|
| Observeda | Missinga | Differenceb | Observeda | Missinga | Differenceb | |
| Base | 30.9 (10.3) | 32.7 (11.3) |
| 30.4 (9.3) | 33.6 (11.7) |
|
| 6 months | 24.6 (13.1) | 24.4 (13.2) | 0.2 ( | 17.4 (13.6) | 21.8 (14.9) |
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| 12 months | 21.8 (13.3) | 21.5 (12.4) | 0.2 ( | 15.8 (12.9) | 19.5 (15.8) |
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| 46 months | 23.4 (13.2) | 19.2 (13.8) | ||||
Note: Patients missing and observed at 46 months are compared for all time points, with mean differences and 95% confidence intervals provided.
Given are mean and SD.
Given is the mean difference (observed‐missing) with 95% confidence interval.
FIGURE 1Trimmed means (TM) and complete case analysis (CCA) estimators across four scenarios with varying dropout patterns and treatment arm distributions, for 52.3% dropout in the usual care group (pink), 41.9% dropout in the CBT group (grey) and 52.3% higher value trimming. (1) The location shift assumption and strong MNAR assumption are satisfied, with equal treatment group SDs and strictly higher value dropout. (2) The location shift assumption is satisfied, but the strong MNAR assumption is violated in the usual care group. (3) The location shift assumption is violated, with , and the strong MNAR assumption is satisfied. (4) The location shift assumption is violated with , and the strong MNAR assumption is violated in the usual care group and to a lesser degree in the CBT group
Treatment effect estimate (), SE, and 95% confidence interval (95% CI), for the trimmed means (TM) estimator, complete case analysis (CCA), multiple imputation model with baseline outcome measurements (MI baseline) and multiple imputation model with intermediate outcome measurements (MI intermediate)
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| SE | 95% CI | |
|---|---|---|---|
| TM |
| 1.47 | ( |
| CCA |
| 1.53 | ( |
| MI (baseline) |
| 1.39 | ( |
| MI (intermediate) |
| 1.37 | ( |
Trimmed mean estimator treatment effect bounds and bias components under different dropout assumptions
| Group | Spread |
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| TM estimate bounds | |
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| A | UC | 1 |
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| 0 |
| 9.27 | [ |
| CBT | 0.419 | |||||||
| B | UC | 1 |
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| 0.41 |
| 2.83 | [ |
| CBT | 0.6 | |||||||
| C | UC | 0.8 |
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| 0.41 |
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| [ |
| CBT | 0.6 |
Note: (A) CBT group dropout restricted to the top 41.9% of the distribution and homogeneous UC group dropout; (B) CBT group dropout in the top 60% of the distribution and homogenous UC group dropout; (C) CBT group dropout in the top 60% of the distribution and UC group dropout in the top 80%. Shown are the bias components for violation of the location shift assumption (), for violation of the strong MNAR assumption in the UC group (), for violation of the strong MNAR assumption in the CBT group (), the total bias (), the bias adjusted estimate (), and the maximum bounds of the TM estimate, .