Andreas Stein1, Persefoni Hilken Née Thomopoulou1, Corazon Frias2, Sina M Hopff2, Paloma Varela3, Nicola Wilke2, Arul Mariappan4, Jörg-Martin Neudörfl1, Alexey Yu Fedorov5, Jay Gopalakrishnan4, Benoît Gigant3, Aram Prokop2,6,7, Hans-Günther Schmalz1. 1. Department of Chemistry, University of Cologne, 50939 Cologne, Germany. 2. Department of Paediatric Oncology, Children's Hospital Cologne, 50735 Cologne, Germany. 3. Université Paris-Saclay, CEA, CNRS, Institute for Integrative Biology of the Cell (I2BC), 91198 Gif-sur-Yvette cedex, France. 4. Laboratory for Centrosome and Cytoskeleton Biology, Institute of Human Genetics, Heinrich-Heine-University, 40225 Düsseldorf, Germany. 5. Department of Organic Chemistry, N.I. Lobachevsky State University of Nizhny Novgorod, 603950 Nizhny Novgorod, Russian Federation. 6. Department of Pediatric Hematology/Oncology, Helios Clinic Schwerin, 19055 Schwerin, Germany. 7. MSH Medical School Hamburg, Am Kaiserkai 1, 20457 Hamburg, Germany.
Abstract
Colchicine, the main active alkaloid from Colchicum autumnale L., is a potent tubulin binder and represents an interesting lead structure for the development of potential anticancer chemotherapeutics. We report on the synthesis and investigation of potentially reactive colchicinoids and their surprising biological activities. In particular, the previously undescribed colchicinoid PT-100, a B-ring contracted 6-exo-methylene colchicinoid, exhibits extraordinarily high antiproliferative and apoptosis-inducing effects on various types of cancer cell lines like acute lymphoblastic leukemia (Nalm6), acute myeloid leukemia (HL-60), Burkitt-like lymphoma (BJAB), human melanoma (MelHO), and human breast adenocarcinoma (MCF7) cells at low nanomolar concentrations. Apoptosis induction proved to be especially high in multidrug-resistant Nalm6-derived cancer cell lines, while healthy human leukocytes and hepatocytes were not affected by the concentration range studied. Furthermore, caspase-independent initiation of apoptosis via an intrinsic pathway was observed. PT-100 also shows strong synergistic effects in combination with vincristine on BJAB and Nalm6 cells. Cocrystallization of PT-100 with tubulin dimers revealed its (noncovalent) binding to the colchicine-binding site of β-tubulin at the interface to the α-subunit. A pronounced effect of PT-100 on the cytoskeleton morphology was shown by fluorescence microscopy. While the reactivity of PT-100 as a weak Michael acceptor toward thiols was chemically proven, it remains unclear whether this contributes to the remarkable biological properties of this unusual colchicinoid.
Colchicine, the main active alkaloid from Colchicum autumnale L., is a potent tubulin binder and represents an interesting lead structure for the development of potential anticancer chemotherapeutics. We report on the synthesis and investigation of potentially reactive colchicinoids and their surprising biological activities. In particular, the previously undescribed colchicinoid PT-100, a B-ring contracted 6-exo-methylene colchicinoid, exhibits extraordinarily high antiproliferative and apoptosis-inducing effects on various types of cancer cell lines like acute lymphoblastic leukemia (Nalm6), acute myeloid leukemia (HL-60), Burkitt-like lymphoma (BJAB), human melanoma (MelHO), and human breast adenocarcinoma (MCF7) cells at low nanomolar concentrations. Apoptosis induction proved to be especially high in multidrug-resistant Nalm6-derived cancer cell lines, while healthy human leukocytes and hepatocytes were not affected by the concentration range studied. Furthermore, caspase-independent initiation of apoptosis via an intrinsic pathway was observed. PT-100 also shows strong synergistic effects in combination with vincristine on BJAB and Nalm6 cells. Cocrystallization of PT-100 with tubulin dimers revealed its (noncovalent) binding to the colchicine-binding site of β-tubulin at the interface to the α-subunit. A pronounced effect of PT-100 on the cytoskeleton morphology was shown by fluorescence microscopy. While the reactivity of PT-100 as a weak Michael acceptor toward thiols was chemically proven, it remains unclear whether this contributes to the remarkable biological properties of this unusual colchicinoid.
Extracts
from the meadow saffron (Colchicum autumnale L.) containing the tricyclic alkaloid colchicine (1, Figure ) as the
main bioactive component have found use in herbal medicine since ancient
times.[1] Colchicine is still used in modern
medicine to treat inflammatory diseases like gouty arthritis,[1−4] Behçet’s disease,[2,5,6] pericarditis,[2,7,8] and familial Mediterranean fever.[2,9,10] However, the dosage has to be controlled carefully
due to a narrow therapeutic window associated with the alkaloid’s
high systemic toxicity. Thus, overdosing may cause severe side effects
ranging from gastrointestinal irritation to death.[2]
Figure 1
(aR,7S)-colchicine (1) and structures of common colchicine analogues (2)
and semisynthetic colchicinoids 3 and 4 from
our previous work.
(aR,7S)-colchicine (1) and structures of common colchicine analogues (2)
and semisynthetic colchicinoids 3 and 4 from
our previous work.Aside from its anti-inflammatory
properties, colchicine (1) exhibits a strong effect on
malignant tumor cells.[11−13] The cytostatic activity of 1 and many
of its derivatives
is based on the strong binding affinity toward tubulin at the so-called
colchicine-binding site (CBS). Tubulins, specifically α-tubulin
and β-tubulin, are globular proteins omnipresent in eukaryotic
cells.[14] By noncovalent interactions, α,β-heterodimers
are formed, which self-assemble into elongated polymer structures
(protofilaments) of microtubules. Microtubules are important for the
structural integrity and motility of a cell as well as for intracellular
transport. In particular, they emanate from the mitotic spindle poles
as spindle microtubules and play a central role in accurate cell division
during mitosis.[14−16] CBS-binding small molecules like colchicine inhibit
the polymerization of α,β-tubulin heterodimers,[17] thus disrupting the microtubule assembly. This
causes cell cycle arrest in the G2/M phase and subsequent apoptosis
induction in proliferating cells.[18]Due to the toxicity and high doses required for chemotherapeutic
treatment, colchicine (1) itself cannot be used in cancer
therapy.[12] However, the molecule represents
a promising lead structure, and countless colchicine-derived compounds
of type 2 (compare Figure ) have been described in the last decades as potential
novel chemotherapeutics.[19−22] Contributions from our own laboratories (Figure ) include triazoles
of type 3(23) and heterocycle-fused
allocolchicinoids such as 4(24−26) exhibiting
high activity against relevant cancer cell lines.While most
drugs, including colchicine (1), bind reversibly
to their protein targets, covalently binding agents (with the exception
of a few special compounds such as β-lactam antibiotics) have
received less attention in pharmacological development due to allegedly
higher toxicity risks[27,28] and such compounds have been
mainly used for analytical purposes, for instance, in the identification
of target proteins of active small molecules.[29−33] In the last decade, however, targeted covalent inhibitors
(TCIs) are enjoying increasing attention,[34−37] peaking in the recent development
of clinically approved drugs, such as ibrutinib,[38] rociletinib,[39] and afatinib.[39] Like many TCIs,[29,40] these novel
anticancer drugs feature an α,β-unsaturated carbonyl moiety
allowing their covalent attachment to a cysteine side chain of the
target protein in a Michael-type addition reaction.In the course
of our own research program on novel colchicine-derived
compounds, we accidentally recognized that one compound (PT-100),
which was initially only obtained as a byproduct, exhibited particularly
high cytotoxicity in preliminary screening. This compound was later
identified as exo-methylene-nor-colchicine 7 (see below), which possibly might act as a covalently binding
agent as it represents a potential Michael-like acceptor molecule.
Inspired by this observation, we decided to investigate PT-100 (and
related colchicine derivatives) in more detail and disclose the results
herein.
Results and Discussion
Chemical Synthesis
We started our
investigation with
the known conversion of N-deacetyl-colchicine (5), which is easily obtained from commercially available colchicine
in three steps,[41] into Demjanov-rearranged
B-nor-colchicine derivative 6 following the protocol
of Danieli et al. (Scheme ).[42] When we tried to react the
primary OH function of 6 in a Mitsunobu-type[43] reaction, we observed the formation of elimination
product 7, initially as a byproduct. As this compound
exhibited unexpected and promising biological activity (vide infra),
we optimized its synthesis. Using a reagent combination of di-tert-butyl azodicarboxylate and triphenylphosphine in chloroform
(0 °C to room temperature (rt)), the transformation proceeded
cleanly, yielding olefin 7 in 84% isolated yield after
purification on a gram scale. As compound 7 represents
a vinylogous Michael acceptor, we decided to also investigate related
compounds that might also possibly act as covalently binding agents.
Following the protocol of Sun et al.,[44] we prepared the known thiocolchicine analogue 8. Considering
that halogenation at position 4 occasionally has a positive impact
on the activity of colchicinoids,[45] we
also prepared chlorinated analogue 9 by heating 7 with N-chloro succinimide (NCS) in acetic
acid. In addition, we succeeded in synthesizing rac-10 by epoxidation of 7 with dimethyldioxirane
(DMDO).
Reagents and conditions: (a)
Boc2O, NEt3, N,N-dimethylaminopyridine (DMAP), MeCN, reflux, 6 h, 96%; (b) NaOMe,
MeOH, 0 °C, 30 min, rt, 1.5 h, 99%; (c) trifluoroacetic acid
(TFA), dichloromethane (DCM), rt, 2 h, 91%; (d) NaNO2,
AcOH, H2O, rt, 5 h, 41%; (e) PPh3, DBAD, CHCl3, 0 °C, 1 h, rt, 15
h, 84%; (f) NCS, AcOH, 70 °C, 2.5 h, 45%, (g) DMDO, EtOAc/acetone
1:3, 0 °C, 2 h, rt, 15 h, 34%; (h) PhSH, diisoproylethylamine
(DIPEA), MeOH, rt, 2 h, 12%.To probe whether
compound 7 is able to react as a
Michael acceptor with S nucleophiles, it was treated with thiophenol
in the presence of a base to indeed afford adduct rac-11 (Scheme ). Other thiols, such as N-Boc-cysteamine, N-Boc-cysteine
methyl ester, and 2-phthalimido ethanethiol, were found to also react
with 7; however, complex mixtures of air and/or light-sensitive
products were formed in these cases. Mass spectrometry of the crude
mixtures indicated the formation of the expected adducts associated
with the disappearance of the olefinic protons in the 1H NMR spectra.
Biological Investigations
Initial
biological experiments
using B-cell precursor leukemia cell cultures (Nalm6) showed that
compound 7 (and to a slightly lower extend also rac-10) exhibits remarkable cytotoxic activity.
Compound 7 is about 100 times more active than the chlorinated
derivative 9 and twice as active as thio analogue 8 (Figure A). Compound 7 was therefore selected for further in-depth
investigations.
Figure 2
Activity of synthesized colchicinoids. Untreated cells
are used
as a control (Co). (A) AC50 values (concentration at which
50% cells show apoptosis) of compounds 1, 7, 8, 9, and rac-10 against Nalm6 cells after 72 h incubation (n = 3). (B) Cell proliferation in Burkitt-like lymphoma (BJAB) cells
inhibited by 7. Cells were incubated with different concentrations
of 7. After 48 and 72 h, the cell proliferation was determined
using a CASY Cell Counter + Analyzer system. Inhibition of proliferation
is given as the percentage of control ± standard deviation (SD)
(n = 3). (C) Apoptotic effects in acute myeloid leukemia
(AML) cells. HL-60 cells were incubated with different concentrations
of 7 for 72 h. Then, DNA fragmentation was measured by
flow cytometric analysis. Values are given as the percentage of apoptotic
cells ± SD (n = 3).
Activity of synthesized colchicinoids. Untreated cells
are used
as a control (Co). (A) AC50 values (concentration at which
50% cells show apoptosis) of compounds 1, 7, 8, 9, and rac-10 against Nalm6 cells after 72 h incubation (n = 3). (B) Cell proliferation in Burkitt-like lymphoma (BJAB) cells
inhibited by 7. Cells were incubated with different concentrations
of 7. After 48 and 72 h, the cell proliferation was determined
using a CASY Cell Counter + Analyzer system. Inhibition of proliferation
is given as the percentage of control ± standard deviation (SD)
(n = 3). (C) Apoptotic effects in acute myeloid leukemia
(AML) cells. HL-60 cells were incubated with different concentrations
of 7 for 72 h. Then, DNA fragmentation was measured by
flow cytometric analysis. Values are given as the percentage of apoptotic
cells ± SD (n = 3).We found that low nanomolar concentrations of 7 (IC50 < 3 nM) are sufficient to effectively inhibit the growth
of quickly proliferating Burkitt-like lymphoma (BJAB) cells (Figure B). Increasing the
concentration from 3 to 8 nM led to a complete (up to 100%) inhibition
of cell proliferation. Noteworthy, 7 also induces high
levels of apoptosis in the AML cell line HL-60 already at low nanomolar
concentrations (Figure C).Apoptosis and necrosis are two different types of cell
death.[54] The lactate dehydrogenase (LDH)
assay confirmed
that the cytotoxic effects of 7 result in apoptosis and
not necrosis.[55] After incubating BJAB cells
for 1 h with 3–50 nM 7, we measured the LDH release
into the culture medium by enzyme-linked immunosorbent assay (ELISA).
At all concentrations, the viability of the cells stayed at 100% (Figure A). The Annexin V
fluorescein isothiocyanate/propidium iodide (V-FITC/PI) assay showed
early apoptosis values between 33.2 and 42.6% at 3–8 nM 7 (Figure B). A significant increase of late apoptosis was detected at higher
concentrations of 7. In accordance with the results of
the LDH assay, no significant levels of necrosis were detected. Remarkably,
compound 7 was found to be highly selective toward the
tumor cells tested, while it showed no toxicity against healthy leukocytes
(Figure C). Even at
increased concentrations of 7 (up to 8 nM), at which
BJAB lymphoma and Nalm6 leukemia cells show high levels of apoptosis,
leukocytes remained virtually unaffected. Furthermore, hepatotoxicity
at relevant concentrations of 7 could be excluded. We
tested the substance at concentrations of up to 80 nM on healthy human
hepatocytes without any loss of vitality. In comparison, we observed
that human hepatocytes are affected by colchicine at these concentrations
(Figure D).
Figure 3
Exclusion of
necrosis and proof of selectivity of compound 7 toward
cancer cells. Some cells were left untreated as control
(Co) or treated only with dimethyl sulfoxide (DMSO). (A) BJAB cells
were treated with different concentrations of 7 and incubated
for 1 h. Viability was determined by the LDH release assay. Values
are given as the percentage of control. (B) Annexin V-FITC/PI assay.
BJAB cells were treated with 3–8 nM 7 and incubated
for 48 h. The amount of early apoptosis, late apoptosis, and necrosis
is shown in percentage. Values are expressed as the percentage of
control ± SD (n = 3). (C) Induction of apoptosis
in BJAB, Nalm6, and healthy leukocytes. Cells were incubated with 7 at different concentrations. DNA fragmentation was measured
after 72 h by flow cytometric analysis. Values are given as the percentage
of apoptotic cells based on the total population (n = 3). (D) Healthy human hepatocytes were treated with 20, 50, and
80 nM colchicine or 7 and then incubated for 96 h. DNA
fragmentation was measured by flow cytometric analysis. Values are
given as the percentage of apoptotic cells and are expressed at means
± SD (n = 3).
Exclusion of
necrosis and proof of selectivity of compound 7 toward
cancer cells. Some cells were left untreated as control
(Co) or treated only with dimethyl sulfoxide (DMSO). (A) BJAB cells
were treated with different concentrations of 7 and incubated
for 1 h. Viability was determined by the LDH release assay. Values
are given as the percentage of control. (B) Annexin V-FITC/PI assay.
BJAB cells were treated with 3–8 nM 7 and incubated
for 48 h. The amount of early apoptosis, late apoptosis, and necrosis
is shown in percentage. Values are expressed as the percentage of
control ± SD (n = 3). (C) Induction of apoptosis
in BJAB, Nalm6, and healthy leukocytes. Cells were incubated with 7 at different concentrations. DNA fragmentation was measured
after 72 h by flow cytometric analysis. Values are given as the percentage
of apoptotic cells based on the total population (n = 3). (D) Healthy human hepatocytes were treated with 20, 50, and
80 nM colchicine or 7 and then incubated for 96 h. DNA
fragmentation was measured by flow cytometric analysis. Values are
given as the percentage of apoptotic cells and are expressed at means
± SD (n = 3).Finding substances that overcome resistance in tumor cell lines
is a particular challenge in oncology research because failure in
chemotherapy mainly results from cellular drug resistance.[46,47] Therefore, the fact that 7 preferably induces apoptosis
in vincristine-resistant (NVCR) and daunorubicin-resistant (NDau)
Nalm6 cells represents a remarkable discovery. These cells are multidrug-resistant
(MDR) due to the overexpression of the drug efflux pump P-glycoprotein
(P-gp) encoded by the MDR1/ABCB1 gene and are resistant against, among
other drugs, fludarabine, paclitaxel, and colchicine.[48−50] P-gp overexpression is the most common mechanism of MDR and causes
a decrease of intracellular drug concentration.[51,52] While normal Nalm6 cells are only slightly affected by 7 at low concentrations (3–4 nM), the corresponding fully vincristine-resistant
cell line (NVCR) already displays ≥90% apoptosis induction
at 4 nM (Figure B).
A similar effect was found for daunorubicine-resistant Nalm6 (NDau)
cells (Figure A).
Cytostatic agents like vincristine, daunorubicin, and paclitaxel attach
to the transmembrane domains of P-gp, but 7 has the potential
to overcome the binding position in an impressive way.[52,53]
Figure 4
Investigation
of the mechanism of action of 7. Control
(Co) cells were left untreated. (A, B) Induction of apoptosis in Nalm6,
NDau, and NVCR cells. Cells were incubated with 7 at
different concentrations. To prove the resistance, cells were additionally
treated with vincristine (VCR) at 20 nM or daunorubicin (Dau) at 52.5
nM, respectively. Apoptosis induction was determined by DNA fragmentation,
measured after 72 h by flow cytometric analysis. The values are given
as the percentage of apoptotic cells based on the total population
± SD (n = 3). (C) Loss of mitochondrial membrane
potential. After treatment of BJAB cells with different concentrations
of 7 and incubation for 48 h, mitochondrial membrane
permeability was measured by flow cytometric analysis after staining
with JC-1 dye. Values are given as the percentage of cells with low
ΔΨm ± SD (n = 3). (D)
MelHO-pIRES and MelHO-Bcl-2 cells were treated with different concentrations
of 7. The incubation time was 72 h. DNA fragmentation
was measured by flow cytometric analysis of the cellular DNA content.
Values are given as the percentage of apoptotic cells and are expressed
as means ± SD (n = 3). (E) Effect of 7 on vincristine-resistant (BiBo) and normal BJAB cells. As a control,
both cell lines were treated with 4 nM vincristine (VCR). The incubation
time was 72 h. DNA fragmentation was measured by flow cytometric analysis
of cellular DNA content. Values are given as the percentage of apoptotic
cells and are expressed as means ± SD (n = 3).
Investigation
of the mechanism of action of 7. Control
(Co) cells were left untreated. (A, B) Induction of apoptosis in Nalm6,
NDau, and NVCR cells. Cells were incubated with 7 at
different concentrations. To prove the resistance, cells were additionally
treated with vincristine (VCR) at 20 nM or daunorubicin (Dau) at 52.5
nM, respectively. Apoptosis induction was determined by DNA fragmentation,
measured after 72 h by flow cytometric analysis. The values are given
as the percentage of apoptotic cells based on the total population
± SD (n = 3). (C) Loss of mitochondrial membrane
potential. After treatment of BJAB cells with different concentrations
of 7 and incubation for 48 h, mitochondrial membrane
permeability was measured by flow cytometric analysis after staining
with JC-1 dye. Values are given as the percentage of cells with low
ΔΨm ± SD (n = 3). (D)
MelHO-pIRES and MelHO-Bcl-2 cells were treated with different concentrations
of 7. The incubation time was 72 h. DNA fragmentation
was measured by flow cytometric analysis of the cellular DNA content.
Values are given as the percentage of apoptotic cells and are expressed
as means ± SD (n = 3). (E) Effect of 7 on vincristine-resistant (BiBo) and normal BJAB cells. As a control,
both cell lines were treated with 4 nM vincristine (VCR). The incubation
time was 72 h. DNA fragmentation was measured by flow cytometric analysis
of cellular DNA content. Values are given as the percentage of apoptotic
cells and are expressed as means ± SD (n = 3).The two main pathways to introduce apoptosis are
the mitochondria-dependent
intrinsic pathway and the death receptor-dependent extrinsic pathway.[57] The result of both pathways is the activation
of caspases that regulate apoptosis.[58] A
protein of the mitochondrial pathway is the strong antiapoptotic protein
Bcl-2 that is overexpressed in several tumor cell lines. Aside from
the fact that common cytostatic drugs are often caspase-3 (C3)-dependent,
they usually cannot address Bcl-2 overexpressing cancer cells.[64] To clarify the possible interplay of 7 with Bcl-2, we used two different cell lines and their modified
variants that are characterized by Bcl-2 overexpression. While the
melanoma cell line MelHO-pIRES is just transfected with the pIRES
plasmid, the MelHO-Bcl-2 cells also contain Bcl-2 cDNA within pIRES.
This results in a 30-fold overexpression of Bcl-2 in the MelHO-Bcl-2
cell line compared to MelHO-pIRES. Figure D shows that at lower concentrations of 7 (3 and 4 nM) the apoptotic effects in both MelHO cell lines
are similar. With increasing concentrations of 7, a stronger
apoptotic effect is observed for the MelHO-pIRES cells (up to 40%
apoptotic cells) as compared to the MelHO-Bcl-2 cells (up to 25%).
As expected, Bcl-2 overexpression leads to a suppression of apoptosis;
however, compound 7 is powerful enough to still induce
apoptosis in MelHO-Bcl-2 cells to a significant extent.The
second resistant BJAB cell line that we generated in our lab
(named BiBo) is characterized by vincristine resistance. The resistance
mechanism is also based on Bcl-2 overexpression. As expected, DNA
fragmentation upon treatment of BJAB and BiBo cells with 7 results in pronounced apoptosis induction in both cell lines (Figure E). Nevertheless,
the effect in BiBo cells is around 10% lower than that in the BJAB
cells for the same reasons explained above.The intrinsic pathway
is associated with the loss of the mitochondrial
membrane potential and associated changes in its permeability.[59,60] Furthermore, caspase-9 participates as an initiator and caspase-3
as another key component in the mitochondrial pathway.[61,62] Western blot analysis after incubating BJAB cells with 5 and 8 nM 7 for 36 h revealed activation of caspase-9 (C9) but no significant
activation of caspase-3 (C3) (Figure A). This indicates the involvement of the intrinsic
pathway in the induction of apoptosis by 7 as reflected
by the appearance of cleaved C9 and small consumption of procaspase-3.
The induction of apoptosis by 7 via the intrinsic mitochondrial
pathway is also confirmed by the dose-dependent loss of the mitochondrial
membrane potential of BJAB cells (Figure C). At 5 nM concentration, 7 leads to disruption of the membrane potential of 30% cells (increasing
to 38% at 8 nM).
Figure 5
Compound 7 induces apoptosis via the intrinsic
pathway
in a caspase-independent fashion. As a control, some cells were left
untreated (Co). (A) Procaspase-3 and procaspase-9 processing. BJAB
cells were incubated with 5 and 8 nM 7. Epirubicin (Epi)
was used as the positive control. Sodium dodecyl sulfate-polyacrylamide
gel electrophoresis (SDS-PAGE) was used for separation of 20 μg
of cytosolic proteins followed by western blot analysis. Immunoblotting
was done with anti-C3 and anti-C9 antibodies. Loading and blotting
control via β-actin. (B) Experimental proof of caspase independence
by treatment of Nalm6 cells with 3 nM 7 alone and in
combination with pancaspase inhibitor ZVAD-fmk (ZV). As a control,
6.25 nM epirubicin (Epi) was added alone and in combination with ZV.
After 72 h of incubation, DNA fragmentation was measured by flow cytometric
analysis using three batches per concentration. Values are given as
the percentage of apoptotic cells ± SD. (C) C3-independent activity
of 7 shown by treatment of MCF7(−) cells and MCF7(+)
cells with different concentrations of 7. DNA fragmentation
was measured after 72 h by flow cytometric analysis of cellular DNA
content (staining with JC-1 dye). Values are given as the percentage
of cells with hypodiploid DNA ± SD (n = 3).
(D) Second proof of C3-independent action of 7. BJAB
and doxorubicin-resistant 7CCA cells were treated with different concentrations
of 7. Doxorubicin (Doxo) was added to both cell lines
(c = 86 nM) to prove the resistance. DNA fragmentation
was measured after 72 h by flow cytometric analysis of the cellular
DNA content. Values are given as the percentage of cells with hypodiploid
DNA ± SD (n = 3).
Compound 7 induces apoptosis via the intrinsic
pathway
in a caspase-independent fashion. As a control, some cells were left
untreated (Co). (A) Procaspase-3 and procaspase-9 processing. BJAB
cells were incubated with 5 and 8 nM 7. Epirubicin (Epi)
was used as the positive control. Sodium dodecyl sulfate-polyacrylamide
gel electrophoresis (SDS-PAGE) was used for separation of 20 μg
of cytosolic proteins followed by western blot analysis. Immunoblotting
was done with anti-C3 and anti-C9 antibodies. Loading and blotting
control via β-actin. (B) Experimental proof of caspase independence
by treatment of Nalm6 cells with 3 nM 7 alone and in
combination with pancaspase inhibitor ZVAD-fmk (ZV). As a control,
6.25 nM epirubicin (Epi) was added alone and in combination with ZV.
After 72 h of incubation, DNA fragmentation was measured by flow cytometric
analysis using three batches per concentration. Values are given as
the percentage of apoptotic cells ± SD. (C) C3-independent activity
of 7 shown by treatment of MCF7(−) cells and MCF7(+)
cells with different concentrations of 7. DNA fragmentation
was measured after 72 h by flow cytometric analysis of cellular DNA
content (staining with JC-1 dye). Values are given as the percentage
of cells with hypodiploid DNA ± SD (n = 3).
(D) Second proof of C3-independent action of 7. BJAB
and doxorubicin-resistant 7CCA cells were treated with different concentrations
of 7. Doxorubicin (Doxo) was added to both cell lines
(c = 86 nM) to prove the resistance. DNA fragmentation
was measured after 72 h by flow cytometric analysis of the cellular
DNA content. Values are given as the percentage of cells with hypodiploid
DNA ± SD (n = 3).Interestingly, 7 also induced DNA fragmentation in
the C3 defective human breast cancer cell line MCF7(−) as well
as in the modified strain MCF7(+), which is able to express C3 (Figure C). This protease
exerts a key function in both the intrinsic and extrinsic pathways.[61] Accordingly, most of the common cytostatic agents
induce apoptosis in a C3-dependent manner.[63] C3 independence of 7 was further underlined by testing
the substance against regular BJAB as well as doxorubicin-resistant
BJAB (7CCA) cells, the latter being characterized by downregulation
of C3 expression. The fact that the percentage of apoptotic cells
was as high or even higher in the treated 7CCA cells as compared to
the BJAB cells again indicates C3-independent induction of apoptosis
by 7 (Figure D).Remarkably, we also found out that the strong proapoptotic
effect
of 7 in Nalm6 cells cannot be blocked by pancaspase inhibitor
zVAD-fmk. For this experiment, Nalm6 cells were incubated with 7 alone and with a combination of 7 and zVAD-fmk,
respectively, and the percentage of apoptotic cells was determined
by FACScan analysis. The results shown in Figure B clearly indicate that 7 induces
apoptosis not only independently from C3 but also from the general
caspase cascade, despite the activation of C9 (Figure A).The combination of two cytostatic
drugs represents a well-explored
strategy to reach a better therapeutic response due to sensitization
of the tumor cells.[56] To test the synergistic
effects of 7, we combined this substance at very low
concentrations with vincristine. Separate treatment of BJAB cells
with either 7 (3 nM) or vincristine (0.3 and 0.4 μM)
showed no significant apoptosis induction after 72 h. However, the
combined effect of 7 and vincristine at the same concentrations
resulted in significantly higher values than the sum of their individual
parts (Figure A).
The highest synergistic effect (factor 15) is observed at a concentration
of 3 nM 7 and 0.3 μM vincristine. In a similar
fashion, Nalm6 cells were treated with 7 (2 nM) and vincristine
(0.8 and 1 nM) again, resulting in a strong (up to 14 fold) synergistic
effect (Figure B).
These strong synergistic effects indicate that 7 has
the potential to effectively sensitize leukemia and lymphoma cells
toward vincristine.
Figure 6
Synergistic effects of 7 and vincristine.
Cells were
treated with different concentrations of 7 and vincristine,
either separately or in combination. Control cells were left untreated.
After 72 h of incubation, DNA fragmentation was measured by flow cytometric
analysis using three batches per concentration. Values are given as
the percentage of apoptotic cells ± SD. The synergistic effect
in percentage is written above. (A) BJAB cells were treated with 7 (3 nM) and vincristine (0.3 and 0.4 μM). (B) Nalm6
cells were treated with 7 (2 nM) and vincristine (0.8
and 1 nM).
Synergistic effects of 7 and vincristine.
Cells were
treated with different concentrations of 7 and vincristine,
either separately or in combination. Control cells were left untreated.
After 72 h of incubation, DNA fragmentation was measured by flow cytometric
analysis using three batches per concentration. Values are given as
the percentage of apoptotic cells ± SD. The synergistic effect
in percentage is written above. (A) BJAB cells were treated with 7 (3 nM) and vincristine (0.3 and 0.4 μM). (B) Nalm6
cells were treated with 7 (2 nM) and vincristine (0.8
and 1 nM).In addition to the cytotoxicity
studies, the effect of 7 on microtubule cytoskeleton
morphology of MDA-MB-231 breast cancer
cells was explored by means of immunofluorescence microscopy.[23] For this purpose, cells were incubated with 7 at a concentration of 100 nM and microtubules, centrosomes,
and DNA were visualized using respective antibodies such as anti-tubulin
and anti-Cep152 (Figure ). While untreated cells (Figure A) showed a typical microtubule network, incubation
with 100 nM paclitaxel as a microtubule-stabilizing agent resulted
in the formation of stable microtubules (Figure B). In the case of colchicine (1), the microtubule network collapsed completely (Figure C). Interestingly, compound 7 also suppressed the formation of the microtubule network
(at 100 nM), however, short microtubule fragments tending to localize
around the cell nucleus were observed (Figure D).
Figure 7
Microtubule morphology of MDA-MB-231 breast
cancer cells after
24 h incubation. Microtubules (red) and centrosomes (green) were stained
with antibodies, while 4,6-diamidino-2-phenylindole (DAPI) was used
to visualize DNA (blue). The white scale bars correspond to a distance
of 10 μm. (A) Control (untreated cells), (B) paclitaxel (100
nM), (C) colchicine (1) (100 nM), and (D) 7 (100 nM).
Microtubule morphology of MDA-MB-231 breast
cancer cells after
24 h incubation. Microtubules (red) and centrosomes (green) were stained
with antibodies, while 4,6-diamidino-2-phenylindole (DAPI) was used
to visualize DNA (blue). The white scale bars correspond to a distance
of 10 μm. (A) Control (untreated cells), (B) paclitaxel (100
nM), (C) colchicine (1) (100 nM), and (D) 7 (100 nM).
X-ray Crystallography
To confirm that the remarkable
bioactivity of 7 (PT-100) indeed results from its binding
to the CBS of tubulin and to probe whether it possibly attaches there
in a covalent fashion, we performed an X-ray crystal structure analysis
of a complex of 7 with stathmin-stabilized tubulin heterodimers
(Figure ).[17] The structure confirms that 7 binds
to the colchicine-binding site in a similar fashion to colchicine.
The long distance (approx. 9 Å) between the (potentially reactive)
methylene group of 7 and the nearest nucleophilic amino
acid residue (Cys241, Figure C) indicates that the formation of a covalent bond between 7 and tubulin is highly unlikely to occur, at least not in
the experimentally observed binding mode.
Figure 8
X-ray crystal structure
of 7 (PT-100, cyan) bound
to tubulin. (A) View at the whole T2R complex comprising
two α,β-tubulin heterodimers (in gray, with the β-subunit
in darker gray) stabilized by the stathmin-like domain of the RB3
protein (green) and 7 binding to β-tubulin at the
interface with the α-subunit. (B) Comparison of the binding
geometries of PT-100 (7, cyan) and colchicine (1, yellow, from PBD ID 5EYP).[65] The β-tubulin
subunits have been superimposed; only tubulin with bound PT-100 is
shown. (C) Close-up perspective of 7 occupying the colchicine-binding
site. (D) Same perspective showing the 2 Fobs – Fcalc electron density map
contoured at the 1 σ level.
X-ray crystal structure
of 7 (PT-100, cyan) bound
to tubulin. (A) View at the whole T2R complex comprising
two α,β-tubulin heterodimers (in gray, with the β-subunit
in darker gray) stabilized by the stathmin-like domain of the RB3
protein (green) and 7 binding to β-tubulin at the
interface with the α-subunit. (B) Comparison of the binding
geometries of PT-100 (7, cyan) and colchicine (1, yellow, from PBD ID 5EYP).[65] The β-tubulin
subunits have been superimposed; only tubulin with bound PT-100 is
shown. (C) Close-up perspective of 7 occupying the colchicine-binding
site. (D) Same perspective showing the 2 Fobs – Fcalc electron density map
contoured at the 1 σ level.
Summary and Conclusions
The novel colchicine analogue PT-100
(7), which is
readily prepared in a few chemical steps, from the natural product
colchicine was identified as a highly potent cytotoxic agent against
several relevant tumor cell lines. Compound 7 was found
to exhibit apoptotic and antiproliferative effects at very low (nanomolar)
concentrations in the acute lymphoblastic leukemia cell line Nalm6,
the acute myeloid leukemia cell line HL-60, as well as different cell
lines from solid tumors such as the Burkitt-like lymphoma (BJAB),
human breast cancer (MCF7), and melanoma (MelHO). As an outstanding
feature, 7 was shown to overcome multiple resistances
in both leukemia and lymphoma cells. Extremely high activities were
observed in vincristine- and daunorubicin-resistant Nalm6 cells in
comparison to nonresistant Nalm6 cells. Doxorubicin- and vincristine-resistant
BJAB cells were also strongly affected. For Nalm6 and BJAB cells,
a pronounced synergetic (sensitizing) effect (up to 15-fold) in combination
with vincristine was observed. As another noteworthy property, we
found that 7 initiates apoptosis through a caspase-independent
pathway by investigating apoptosis induction in the presence of pancaspase
inhibitor ZVAD and by studying caspase-3 underexpressing cells. Although 7 was able to induce apoptosis in a caspase-independent manner,
it still had the potential to activate caspases 9 and 3 as shown by
western blot analysis. These results indicated the involvement of
the intrinsic pathway of apoptosis in accordance with the loss of
mitochondrial membrane potential. The high anticancer potential of 7 was further demonstrated by its activity against Bcl-2 overexpressing
BiBo and MelHO-Bcl-2 cells, overcoming the strong antiapoptotic character
of these cells that are not affected by most other cytostatic drugs.
The cell biological investigations were complemented by demonstrating
the strong effect of 7 on the cytoskeleton morphology
of MDA-MB-231 cells. Finally, an X-ray crystal structure of 7 bound to the α,β-tubulin dimer confirmed its
canonical binding to the colchicine-binding site.All in all,
PT-100 (7) represents a promising anticancer
substance for future investigation because it shows high selectivity
toward tumor cells and does not induce apoptosis in healthy human
leukocytes. A further very important fact is that the substance appears
not to be hepatotoxic. Toxicity is a major problem for colchicine
(1) and prevents its clinical use in tumor therapy.[20] The comparison of 7 and 1 in human hepatocytes underlines the hepatotoxicity of 1, whereas 7 does not influence the cells.
Experimental
Section
Chemistry
General Information
All moisture-sensitive
reactions
were carried out under an argon atmosphere using Schlenk flasks and
needle/syringe techniques. Glassware was flame-dried under vacuum
and flushed with argon once cooled down to room temperature. Syringes
and needles were flushed with argon directly prior to use. NMR spectra
were recorded on Bruker AV 300, 400, 500, and 600 instruments. Chemical
shifts (δ) are given in ppm relative to the solvent reference
as an internal standard (CDCl3, δ (1H):
7.24 ppm, δ (13C): 77.0 ppm). Signal multiplicity
is indicated as follows: s for singlet, d for doublet, dd for doublet
of doublets, t for triplet, m for multiplet, and so on. Coupling constants,
if applicable, are given as J in hertz. For atom
assignment (elucidated by heteronuclear multiple bond coherence (HMBC),
heteronuclear multiple quantum coherence (HMQC) and H,H-COSY/H,H-NOESY
experiments), see the Supporting Information. High-resolution mass spectra (HRMS) were recorded on a Thermo Fisher
LTQ Orbitrap XL—FTMS analyzer (HRMS-ESI). Fourier transform
infrared (FT-IR) spectra were recorded on a PerkinElmer FT-IR Spectrum
Two spectrometer. Absorption bands are given in wavenumbers (ν̃,
cm–1) and are characterized for their relative intensity
(w for weak, m for medium, s for strong, and vs for very strong).
Melting points (mp) were measured on a Büchi B-545 melting
point apparatus and are uncorrected. Optical rotation [α] was
measured on an Anton Paar polarimeter MCP 200 at 20 °C and λ
= 589 or 546 nm (cuvette length, 0.5 dm; volume, 1.0 mL). The concentration
is given in g/100 mL. Flash chromatography was performed using silica
gel for chromatography supplied by Acros (0.035–0.070 mm, 60 Å).
Thin-layer chromatography (TLC) plates (Merck silica gel 60 F254)
were used to monitor reaction progress, and spots were visualized
using a 254 nm UV lamp. Chemicals and solvents for synthesis were
purchased from common suppliers and used without further purification.
Starting material N-deacetylcolchicine (5) was prepared by well-established methodologies.[66] Alcohol 6 was then synthesized following a
modified and scaled-up literature procedure.[67]
Under an inert atmosphere were dissolved 80.0
mg (0.23 mmol) of olefin 7 and 47.0 mg (0.35 mmol) of
NCS in 1.40 mL of HOAc and heated up to 70 °C for 5 h. The reaction
mixture was then cooled to 0 °C and treated with a saturated
aqueous solution of Na2S2O3 and a
saturated aqueous solution of NaHCO3 (attention: strong evolution of gas). The aqueous layer was extracted three
times with CHCl3, and the combined organic layers were
dried over MgSO4, filtered, and concentrated under reduced
pressure. The crude product was purified by column chromatography
(CyHex/EtOAc/EtOH, 6:1:1) to yield 40.0 mg (0.11 mmol, 45%) of product 9 as a yellow oil. 1H NMR (600 MHz, CDCl3): δ [ppm] = 3.58 (s, 2H), 3.64 (s, 3H), 3.95 (s, 3H), 3.96
(s, 3H), 4.00 (s, 3H), 5.26 (s, 1H), 5.53 (s, 1H), 6.81 (d, 3JH,H = 10.9 Hz, 1H), 7.57 (s, 1H), 7.90
(d, 3JH,H = 10.9 Hz, 1H). 13C NMR (150 MHz, CDCl3): δ [ppm] = 38.1,
56.3, 60.2, 61.3, 61.4, 112.0, 115.1, 121.2, 126.0, 131.4, 131.8,
132.4, 133.3, 144.3, 146.6, 146.7, 149.9, 150.6, 163.9, 179.7. HRMS
(ESI): calcd for [M + Na]+ (C20H19ClNaO5): 397.08132; found: 397.08139. FT-IR (ATR): ν̃
[cm–1] = 1711 (s), 1584 (s), 1462 (s), 1385 (s),
1255 (s). Rf = 0.19 (CyHex/EtOAc/EtOH,
6:1:1).
To a solution of 102
mg (0.3 mmol, 1.0 equiv) of olefin 7 and 1.00 g (12.0
mmol) of NaHCO3 in 7 mL of 4:2:1 H2O/EtOAc/acetone
was added 369 mg (1.2 mmol) of oxone at 0 °C. After 30 min, another
553 mg (1.8 mmol) of oxone was added. Stirring was continued for 30
min before the last portion of 922 mg (3.0 mmol) of oxone was added.
The reaction mixture was stirred for 1 h at 0 °C, before TLC
indicated almost full conversion. Reactive species were quenched by
addition of 10% w/v aqueous sodium pyrosulphite solution, and the
reaction mixture was extracted three times with methylene chloride.
The combined organic extracts were dried over magnesium sulfate, and
volatiles were removed under reduced pressure. The crude product required
multiple purification steps by flash column chromatography (silica,
Cy/EtOAc/EtOH 6:1:1), giving 43 mg (0.12 mmol, 40%) of rac-10 as yellow foam. 1H NMR (300 MHz, CDCl3): δ [ppm] = 2.36 (d, JH,H = 14.6 Hz, 1H), 2.74 (dd, JH,H = 5.5,
1.7 Hz; 1H), 2.92 (d, JH,H = 5.5 Hz, 1H),
3.39 (dt, JH,H = 14.4, 1.2 Hz; 1H), 3.73
(s, 3H), 3.91 (s, 3H), 3.92 (s, 3H), 3.99 (s, 3H), 6.54 (s, 1H), 6.81
(d, 3JH,H = 11.1 Hz, 1H), 7.39
(s, 1H), 7.94 (d, 3JH,H = 10.9
Hz, 1H). 13C NMR (75 MHz, CDCl3): δ [ppm]
= 36.8, 56.0, 56.2, 57.3, 58.4, 61.1, 106.9, 112.3, 121.2, 129.3,
131.0, 132.4, 133.2, 142.1, 146.1, 151.9, 153.4, 163.4, 179.8. HRMS
(ESI): calcd for [M + Na]+ (C20H20NaO6): 379.11521; found: 379.11551. FT-IR (ATR): ν̃
[cm–1] = 1618 (m), 1248 (s), 1085 (s). Mp: 112–115
°C. Rf: 0.18 (CyHex/EtOAc/EtOH, 6:1:1).
A solution
of 68 mg (0.2 mmol) of olefin 7 and 20 μL (24 mg,
0.22 mmol) of thiophenol in dry methanol (1 mL) was cooled to 0 °C.
About 40 μL (28 mg, 0.22 mmol) of DIPEA was added, and the reaction
was stirred for 6 h, until TLC indicated full conversion. The solvent
was removed in vacuo. The residue was subjected to
column chromatography separation (silica, Cy/EtOAc/EtOH 10:1:1 to
4:1:1), yielding 11 mg (0.024 mmol, 12%) of adduct rac-11. 1H NMR (500 MHz, CDCl3):
δ [ppm] = 2.62 (dd, JH,H = 13.7,
10.9 Hz; 1H), 2.84 (dd, JH,H = 15.0, 4.3
Hz; 1H), 2.92–297 (m, 1H), 3.05 (dd, JH,H = 13.7, 4.7 Hz; 1H), 3.14 (dd, JH,H = 15.1, 2.2 Hz; 1H), 3.69 (s, 3H), 3.90 (s, 3H), 3.92 (s, 3H), 9.98
(s, 3H), 6.55 (s, 1H), 6.81 (d, 3JH,H = 11.1 Hz, 1H), 7.22 (t, 3JH,H = 7.2 Hz, 1H), 7.24 (s, 1H), 7.31 (t, 3JH,H = 8.2 Hz, 2H), 7.36 (d, 3JH,H = 7.1 Hz, 2H), 7.94 (d, 3JH,H = 11.0 Hz, 1H). 13C NMR
(75 MHz, CDCl3): δ [ppm] = 31.8, 36.5, 43.8, 56.0,
56.3, 61.1, 61.2, 108.2, 112.6, 121.2, 126.7, 129.2, 130.1, 131.6,
132.5, 132.5, 135.0, 136.5, 141.8, 150.6, 151.9, 153.5, 163.6, 179.3.
HRMS (ESI): calcd for [M + Na]+ (C26H26NaO5S): 473.13932; found: 473.13916. FT-IR (ATR): ν̃
[cm–1] = 1585 (m), 1251 (s), 1137 (s), 1086 (s).
Mp: 75–76 °C. Rf: 0.33 (CyHex/EtOAc/EtOH,
10:1:1).
Cell Lines and Cultures
The BJAB
mock cell line (Burkitt-like
lymphoma) was obtained from Prof. Dr. S. Fulda, University of Ulm,
Germany. AG Henze, Charité Berlin, Germany provided the Nalm6
(human B-cell precursor leukemia) and HL-60 (human acute myeloid leukemia)
cells. 7CCA (doxorubicin-resistant BJAB cells), BiBo (vincristine-resistant
BJAB cells), NVCR (vincristine-resistant Nalm6 cells), and NDau (daunorubicin-resistant
Nalm6 cells) were generated in our lab by exposing them to increasing
concentrations of the mentioned cytostatic drugs. Doxorubicin, vincristine,
and daunorubicin were provided by the Children’s Hospital Amsterdamer
Straße, Cologne, Germany and were freshly dissolved as 40 mM
stock solutions in DMSO before use. Compared to the general cell lines,
the resistant cells tolerate significant concentrations of the cytostatic
drugs without the loss of vitality. The MCF7 cells are human breast
adenocarcinoma cells from Prof. Dr. Reiner Jänicke, University
of Düsseldorf, Germany. MCF7(−) cells are caspase-3-deficient,
while the modified variant MCF7(+) is capable of caspase-3 expression.
The construct MelHO (human melanoma) pIRES/Bcl-2 was provided by Dr.
Eberle, Charité, Berlin, Germany. The MelHO-pIRES cells were
transfected with the pIRES vector. A modified variant, MelHO-Bcl-2,
has the pIRES-Bcl-2 vector included, resulting in strong overexpression
of the Bcl-2 protein.[79] Human hepatocytes
were obtained from a patient at the Children’s Hospital Amsterdamer
Straße, Cologne, Germany. Healthy leukocytes were donated by
the authors of this paper. All cell lines were incubated in 250 mL
cell culture bottles at 37 °C. The RPMI 1640 medium used for
suspension cells was obtained from Gibco Invitrogen. Heat-inactivated
fetal calf serum (FCS, 10%, v/v), l-glutamine (0.56 g/L),
penicillin (100 000 iu), and streptomycin (0.1 g/L) were added.
Adherent cells were grown in Dulbecco’s modified Eagle’s
medium (DMEM, GIBCO Invitrogen) supplemented with FCS (10%, v/v) and
geniticine (0.4 mg/mL). All cells were passaged 2–3 times per
week and diluted to a concentration of 1 × 105 cells/mL.
Standard conditions were achieved by adjusting all cells to 3 ×
105 cells/mL 24 h before the assay setup. Before pipetting
into six-well plates and treating with substances for experiments,
cells were diluted to 1 × 105 cells/mL.
Cell Concentration
and Viability
A CASY cell counter
and analyzer system from Roche was used to measure the cell count
and viability with different settings for the cell lines. Cell debris,
dead cells, and viable cells were analyzed in one measurement.[68] Cells were seeded at a density of 1 × 105 cells/mL in six-well plates before treating them with different
solutions of 7 in DMSO. As the control group, cells were
left either untreated or were treated with pure DMSO. The incubation
time was 24 h at 37 °C. Then, cells were resuspended and 100
μL of each well was diluted in 10 mL of isotonic saline solution
(CASYton) for an immediate automated count of the cells. The control
group of the cells was defined as 100% growth.
Cytotoxicity
Cytotoxicity
of 7 in BJAB
cells was investigated by the lactate dehydrogenase (LDH) release
assay. The incubation time was 1 h after treating the cells with the
different substances. The release of LDH was measured in the cell
culture supernatants by the Cytotoxicity Detection Kit from Roche.
Centrifugation at 350g for 5 min was followed by
diluting 20 μL of cell-free supernatants with 80 μL of
phosphate-buffered saline (PBS). About 100 μL of the reaction
mixture that contained 2-(4-iodophenyl)-3-(4-nitrophenyl)-5-phenyltetrazolium
chloride, sodium lactate, NAD+, and diaphorase was added.
The quantification of time-dependent formation of the reaction product
was performed photometrically at 490 nm. As a reference for 100% cell
death, control cells were treated with 0.1% Triton X-100.
Apoptosis Differentiation
The Annexin V (V-FITC/PI)
(eBioscience) assay was used to differentiate apoptosis states in
a BJAB cell culture. The incubation time was 48 h. Then, cells were
collected and stained with Annexin V-BITC/PI. Before incubating in
the dark at room temperature for 15 min, 5 × 105 cells
were resuspended in 50 μL of Annexin V staining buffer (10 mM N-(2-hydroxyethyl)piperazine-N′-ethanesulfonic
acid (HEPES), 140 mM NaCl, and 2.5 mM CaCl2, pH 7.4), and
2.5 μL of Annexin V conjugate and 1.25 μL of PI solution
(1 mg/mL) were added. FACSCalibur (Becton Dickinson) and CellQuest
Pro (BD) analysis software was used to analyze the signal intensity.
For Annexin V-FITC, the excitation and emission settings were 488
nm and 515–545 nm (FL1 channel), respectively, and for PI,
these were 564–606 nm (FL2 channel).
DNA Fragmentation
Apoptosis rates were determined by
a modified cell cycle analysis, which detects DNA fragmentation on
the single-cell level.[69] All cells were
pipetted in six-well plates at a density of 1 × 105 cells/mL and then treated with different concentrations of the substances.
The incubation time for all cell lines was 72 h at 37 °C except
for the human hepatocytes with 96 h of incubation. After that, adherent
cells were washed with 180 μL of PBS. After pipetting trypsin
on the cells, they were incubated for 5 min at 37 °C. All cells
were centrifuged at 6500 rpm for 5 min at 4 °C and then fixed
in 200 μL of PBS/2% (v/v) formaldehyde on ice for 30 min. Cells
were collected again by centrifugation at 1500 rpm for 5 min at 4
°C and then incubated with 180 μL of ethanol/PBS (2:1,
v/v) for 15 min. After centrifugation at 1500 rpm for 5 min at 4 °C,
cells were resuspended in 50 μL of PBS containing 40 μg/mL
RNase A (Qiagen). RNA was digested for 30 min at 37 °C. Cells
were centrifuged again at 1500 rpm for 5 min at 4 °C and then
resuspended in 200 μL of PBS containing 50 μg/mL propidium
iodide (Serva). Flow cytometric determination of hypodiploid DNA was
used to quantify nuclear DNA fragmentation (fluorescence-activated
cell sorting, FACS). Using a FACScan by Becton Dickinson, equipped
with CELLQuest software, data were collected and analyzed. The percentage
of hypoploidy (subG1) reflects the number of apoptotic cells. The
induced apoptosis in each concentration of the substances was calculated
by subtracting background apoptosis, observed in control cells, from
total apoptosis seen in the treated cells.
Immunoblotting
BJAB cells were incubated for 36 h with
5 and 8 nM 7. Control cells were left untreated. Epirubicin
was used as the positive control. Cells were washed twice with PBS
and lysed in a buffer containing 10 mM Tris–HCl, pH 7.5, 300
mM NaCl, 1% Triton X-100, 2 mM MgCl2, 5 μM ethylenediamine
tetraacetic acid (EDTA), 1 μM pepstatin, 1 μM leupeptin,
and 0.1 mM phenylmethylsulfonyl fluoride (PMSF). The bicinchoninic
acid assay from Pierce was used to determine the protein concentration.[70] Equal amounts of protein were separated by SDS-PAGE,
and immunoblotting was performed as described in the literature.[71,72] Membrane blocking was performed for 1 h in PBST (PBS, 0.05% Tween-20)
containing bovine serum albumin (BSA) and followed by incubation with
different primary antibodies for 1 h. Anticaspase-3, anticaspase-9,
and anti-β-Actin from Sigma, Saint Louis were used. The membrane
was washed in PBST, and then, the secondary antibody (antimouse IgG
HRP from Bioscience and antirabbit IgG HRP from Promega) was applied
for 1 h in PBST. The membrane was washed again. An ECL enhanced chemiluminescence
system by Amersham Buchler was used to detect the protein bands.
Mitochondrial Membrane Potential
BJAB cells were treated
with different concentrations of 7 for 48 h. After incubation,
cells were centrifuged at 300g for 5 min at 4 °C
and then stained with 5,5′,6,6′-tetrachloro-1,1′,3,3′-tetraethyl-benzimidazolylcarbocyanin
iodide (JC-1; Molecular Probes) as described in the literature to
measure the mitochondrial permeability transition.[73,74] Cells were then resuspended in 500 μL of phenol-red-free RPMI
1640 without supplements. JC-1 was added (c = 2.5
μg/μL). Cells were then incubated for 30 min at 37 °C
while being shaken frequently. Subsequently, cells were collected
by centrifugation at 300g and 4 °C for 5 min.
One sample of control cells was incubated in the absence of JC-1 dye.
All cells were washed with ice-cold PBS and resuspended in 200 μL
of PBS at 4 °C. The mitochondrial permeability transition was
quantified by flow cytometric determination of cells with decreased
fluorescence. FACScan was used as described above. Data is given as
the percentage of cells with low mitochondrial membrane potential
ΔΨm.
Microtubule Morphology
Human tumor
cell line MDA-MB-231
(triple-negative breast adenocarcinoma) was obtained from the American
Type Culture Collection and was cultivated in DMEM (Gibco) supplemented
with 10% heat-inactivated fetal calf serum, 100 U/mL penicillin, and
100 μg/mL streptomycin and maintained at 37 °C and 5% CO2. For microtubule morphology studies, MDA-MB-231 cells were
grown to 80% confluency. Treatment with different compounds was carried
out for 24 h. Subsequently, the cells were fixed using ice-cold methanol
for 10 min followed by 30 min of blocking by treatment with 1 mL of
blocking solution (0.5% gelatin from cold-water fish skin in 1×
PBS) for 1 h at rt or overnight at 4 °C. The blocked cells could
be stored at 4 °C until immunofluorescence staining was carried
out. After removal of the blocking solution, the primary antibody
was added and incubated for 1 h at rt (CPAP overnight at 4 °C).
Some of the primary antibodies were collected back for reuse. After
this step, the cells were washed with the blocking solution for an
interval of 3 min three times. To add secondary antibodies, the blocking
solution was removed and the secondary antibody was added and incubated
for 1 h at rt. The same steps were repeated as above for the remaining
primary and secondary antibodies, and 4,6-diamidino-2-phenylindole
(DAPI) was added with the last used secondary antibody. After the
last washing, the blocking solution was removed and distilled H2O was added. The slides were labeled with cell type, staining,
and date. The coverslips were removed from the water and put on paper
to dry. Mowiol (8 μL) was applied onto the slide, and the coverslip
was placed upside down on top of it. After drying, nail polish was
applied to the edges of the coverslip, and the slides were stored
in a box at 4 °C until imaging. Images were collected using an
Olympus Fluoview FV 1000 scanning confocal microscope. The images
were further processed by Fiji and Adobe Photoshop.The T2R complex was
obtained by addition of compound 7 to T2R
in a 2.5-fold molar excess over tubulin. Crystals that diffracted
X-rays to 2.5 Å resolution were grown in the presence of T2R seeds obtained from subtilisin-treated tubulin.[75] A complete data set was collected at the Proxima1
beamline (SOLEIL Synchrotron). Data were processed with XDS.[76] Molecular replacement was done with Phaser using
3RYC as the search model.[77] The structural
model was refined by BUSTER (Global Phasing Ltd.) with iterative model
building in Coot.[78] Figures of structural
models were generated with PyMOL (www.pymol.org). For 7 and rac-10, single-crystal X-ray diffractometry was conducted
with suitable crystals (obtained from their respective solutions by
solvent evaporation) on a D8 Venture (Bruker) using copper Kα
emission (λ = 1.5406 Å) as the measurement radiation. The
structural resolution was performed by software SHELXT and refined
using SHELXL-2014/7. Images were created by Platon or Schakal99. Data
collection and refinement statistics on the respective compounds and
the T2R:7 complex are listed in the corresponding
data sets in the Supporting File.
Authors: Yuliya V Voitovich; Ekaterina S Shegravina; Nikolay S Sitnikov; Vladimir I Faerman; Valery V Fokin; Hans-Gunther Schmalz; Sebastien Combes; Diane Allegro; Pascal Barbier; Irina P Beletskaya; Elena V Svirshchevskaya; Alexey Yu Fedorov Journal: J Med Chem Date: 2014-12-24 Impact factor: 7.446