| Literature DB >> 35093138 |
Zengpeng Han1,2,3,4, Nengsong Luo1,3,4,5, Jiaxin Kou1,6, Lei Li1, Zihong Xu7, Siyuan Wei8, Yang Wu1, Jie Wang1,2, Chaohui Ye1,2, Kunzhang Lin9,10, Fuqiang Xu11,12,13,14,15,16,17.
Abstract
Retrograde tracers based on viral vectors are powerful tools for the imaging and manipulation of upstream neural networks projecting to a specific brain region, and they play important roles in structural and functional studies of neural circuits. However, currently reported retrograde viral tracers have many limitations, such as brain area selectivity or the inability to retrograde label genetically defined brain-wide projection neurons. To overcome these limitations, a new retrograde tracing method, AAV-PHP.eB assisted retrograde tracing systems (PARTS) based on rabies virus, was established through brain-wide TVA-dependent targeting using an AAV-PHP.eB that efficiently crosses the blood-brain barrier in C57BL/6 J mice, and complementation of EnvA-pseudotyped defective rabies virus that specifically recognizes the TVA receptor. Furthermore, combined with Cre transgenic mice, cell-type-specific PARTS (cPARTS) was developed, which can retrograde label genetically defined brain-wide projection neurons. Our research provides new tools and technical support for the analysis of neural circuits.Entities:
Keywords: AAV-PHP.eB; Cell-type-specific neurons; Projection neurons; Rabies virus; Retrograde tracing
Mesh:
Year: 2022 PMID: 35093138 PMCID: PMC8800268 DOI: 10.1186/s13041-022-00898-8
Source DB: PubMed Journal: Mol Brain ISSN: 1756-6606 Impact factor: 4.041
Fig. 1Schematic diagram of viral vectors carrying functional elements in PARTS and cPARTS strategies. A TVA-expressing vectors that can efficiently transduce brain neurons across the blood–brain barrier. The expression is direct and Cre-dependent. The AAV serotype used here is PHP.eB. B EnvA-pseudotyped glycoprotein (G)-defective rabies virus that can specifically recognize and infect TVA-positive neurons
Fig. 2Local injection to verify the retrograde labelling of the PARTS method. A rAAV-hSyn::H2B-EGFP-T2A-TVA was injected into the S1 of C57BL/6 J mice. At 2 weeks postinjection, RV-EnvA-SAD-B19-ΔG-DsRed was injected into the CPu, and mice were sacrificed after another week. B Fluorescence expression at the injection site (CPu) and the upstream brain region (S1). In the large picture on the left, scale bar = 500 μm; in the small pictures on the right, scale bar = 200 μm
Fig. 3Local injection to verify the retrograde labelling of the cPARTS method. A rAAV-hSyn::DIO-H2B-EGFP-T2A-TVA was injected into the S1 of Thy1-Cre mice, RV-EnvA-SAD-B19-ΔG-DsRed was injected into the CPu after 2 weeks, and then mice were sacrificed in another week. B Fluorescence expression at the injection site (CPu) and the upstream brain region (S1). In the large picture on the left, scale bar = 500 μm; in the small pictures on the right, scale bar = 200 μm
Fig. 4Use of the PARTS method to trace the broad-spectrum upstream input network of the VTA. A Schematic diagram of retrograde tracing by the PARTS method. Helper virus that expresses the TVA receptor fused with nuclear EGFP was intravenously injected into C57BL/6 J adult mice, and RV-EnvA-SAD-B19-ΔG-DsRed was injected into the VTA after 3 weeks. Then, the mice were sacrificed after another week, and the upstream inputs of the VTA were imaged. B Fluorescence expression at the injection site (VTA), scale bar = 200 μm. C Fluorescence expression in some upstream brain regions of the VTA. Red fluorescence signals were colabelled with green fluorescence signals, scale bar = 200 μm. CTX cerebral cortex, LHb lateral habenula, LHA lateral hypothalamic area, ZI zona incerta, MRN midbrain reticular nucleus, CBN cerebellar nuclei
Fig. 5Distribution of GABAergic neurons in the whole brain. A Labelling of rAAV-PHP.eB-hSyn-H2B-EGFP-T2A-TVA in C57BL/6 J mice, scale bar = 1 mm. B Green fluorescence signals in the thalamus of C57BL/6 J mice, scale bar = 200 μm. C Conditional labelling of rAAV-PHP.eB-hSyn-DIO-H2B-EGFP-T2A-TVA in VGAT-Cre transgenic mice, scale bar = 1 mm. (D) Green fluorescence signals in the thalamus of VGAT-Cre mice, scale bar = 200 μm
Fig. 6Use of the cPARTS method to trace the cell-type-specific upstream input network of the VTA. A Schematic diagram of retrograde tracing by the cPARTS method. Cre-dependent helper virus that expresses the TVA receptor fused with nuclear EGFP was intravenously injected into VGAT-Cre adult mice, and RV-EnvA-SAD-B19-ΔG-DsRed was injected into the VTA after 3 weeks. Then, the mice were sacrificed after another week, and the upstream inputs of the VTA were imaged. B Fluorescence expression at the injection site (VTA), scale bar = 200 μm. C Fluorescence expression in some upstream brain regions of the VTA. Red fluorescence signals were colabelled with green fluorescence signals, scale bar = 200 μm. GPe globus pallidus, external segment; LHA lateral hypothalamic area; ZI zona incerta; PRNr pontine reticular nucleus; LDTg laterodorsal tegmental nucleus; VNC vestibular nuclei
Fig. 7Summary of retrograde tracing strategies. A The PARTS strategy can realize traditional broad-spectrum retrograde tracing in two brain regions. B The cPARTS strategy can realize traditional cell type-specific retrograde tracing in two brain regions. C The PARTS strategy can realize broad-spectrum retrograde tracing in the whole brain. D The cPARTS strategy can realize cell type-specific retrograde tracing in the whole brain
Comparison of viral tracers and methods of retrograde tracing
| Method/virus | Efficiency | Preparation | Toxicity | Brain region selectivity | Cell-type-specific |
|---|---|---|---|---|---|
| AAV2-retro | High | Easy | Low | Yes | Yes |
| AAV & AAVR | Medium | Easy | Low | No | Yes |
| CAV2 | Low | Easy | Low | Yes | Yes |
| CAV2 & CAR | Medium | Easy | Low | No | Yes |
| RV-ΔG(N2cG) | High | Easy | High | No | No |
| PARTS | High | Easy | High | No | No |
| cPARTS | High | Easy | High | No | Yes |
Efficiency and brain region selectivity of viral tracers are relative to other viruses, and in most cases, researchers can choose the appropriate viral tracers according to their different experimental needs