Literature DB >> 35076656

Mechanism of action of nucleotide excision repair machinery.

Areetha D'Souza1, Alexandra M Blee1, Walter J Chazin1.   

Abstract

Nucleotide excision repair (NER) is a versatile DNA repair pathway essential for the removal of a broad spectrum of structurally diverse DNA lesions arising from a variety of sources, including UV irradiation and environmental toxins. Although the core factors and basic stages involved in NER have been identified, the mechanisms of the NER machinery are not well understood. This review summarizes our current understanding of the mechanisms and order of assembly in the core global genome (GG-NER) pathway.
© 2022 The Author(s). Published by Portland Press Limited on behalf of the Biochemical Society.

Entities:  

Keywords:  DNA synthesis and repair; nucleotide excision repair; structural biology

Mesh:

Substances:

Year:  2022        PMID: 35076656      PMCID: PMC9275815          DOI: 10.1042/BST20210246

Source DB:  PubMed          Journal:  Biochem Soc Trans        ISSN: 0300-5127            Impact factor:   4.919


  140 in total

Review 1.  A model for initial DNA lesion recognition by NER and MMR based on local conformational flexibility.

Authors:  Richard J Isaacs; H Peter Spielmann
Journal:  DNA Repair (Amst)       Date:  2004-05-04

2.  HHR23B, a human Rad23 homolog, stimulates XPC protein in nucleotide excision repair in vitro.

Authors:  K Sugasawa; C Masutani; A Uchida; T Maekawa; P J van der Spek; D Bootsma; J H Hoeijmakers; F Hanaoka
Journal:  Mol Cell Biol       Date:  1996-09       Impact factor: 4.272

3.  DNA damage recognition by XPA protein promotes efficient recruitment of transcription factor II H.

Authors:  S Nocentini; F Coin; M Saijo; K Tanaka; J M Egly
Journal:  J Biol Chem       Date:  1997-09-12       Impact factor: 5.157

4.  Nucleotide excision repair of DNA with recombinant human proteins: definition of the minimal set of factors, active forms of TFIIH, and modulation by CAK.

Authors:  S J Araújo; F Tirode; F Coin; H Pospiech; J E Syväoja; M Stucki; U Hübscher; J M Egly; R D Wood
Journal:  Genes Dev       Date:  2000-02-01       Impact factor: 11.361

5.  ARCH domain of XPD, an anchoring platform for CAK that conditions TFIIH DNA repair and transcription activities.

Authors:  Wassim Abdulrahman; Izarn Iltis; Laura Radu; Cathy Braun; Anne Maglott-Roth; Christophe Giraudon; Jean-Marc Egly; Arnaud Poterszman
Journal:  Proc Natl Acad Sci U S A       Date:  2013-02-04       Impact factor: 11.205

Review 6.  Role of the XPA protein in the NER pathway: A perspective on the function of structural disorder in macromolecular assembly.

Authors:  Elisa Fadda
Journal:  Comput Struct Biotechnol J       Date:  2015-12-08       Impact factor: 7.271

7.  Structures of transcription pre-initiation complex with TFIIH and Mediator.

Authors:  S Schilbach; M Hantsche; D Tegunov; C Dienemann; C Wigge; H Urlaub; P Cramer
Journal:  Nature       Date:  2017-11-01       Impact factor: 49.962

8.  Disruption of TTDA results in complete nucleotide excision repair deficiency and embryonic lethality.

Authors:  Arjan F Theil; Julie Nonnekens; Barbara Steurer; Pierre-Olivier Mari; Jan de Wit; Charlène Lemaitre; Jurgen A Marteijn; Anja Raams; Alex Maas; Marcel Vermeij; Jeroen Essers; Jan H J Hoeijmakers; Giuseppina Giglia-Mari; Wim Vermeulen
Journal:  PLoS Genet       Date:  2013-04-18       Impact factor: 5.917

9.  Co-correction of the ERCC1, ERCC4 and xeroderma pigmentosum group F DNA repair defects in vitro.

Authors:  M Biggerstaff; D E Szymkowski; R D Wood
Journal:  EMBO J       Date:  1993-09       Impact factor: 11.598

10.  Crystal structure of the FeS cluster-containing nucleotide excision repair helicase XPD.

Authors:  Stefanie C Wolski; Jochen Kuper; Petra Hänzelmann; James J Truglio; Deborah L Croteau; Bennett Van Houten; Caroline Kisker
Journal:  PLoS Biol       Date:  2008-06-24       Impact factor: 8.029

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  1 in total

Review 1.  Genome Integrity and Neurological Disease.

Authors:  Elle E M Scheijen; David M Wilson
Journal:  Int J Mol Sci       Date:  2022-04-08       Impact factor: 6.208

  1 in total

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