Literature DB >> 35072898

An integrated analysis of single-cell and bulk transcriptomics reveals EFNA1 as a novel prognostic biomarker for cervical cancer.

Xiaopeng Shen1, Meng Li2, Yang Lei3, Shan Lu2, Sufen Wang4, Zhongxian Liu2, Chunguang Wang2, Yun Zhao2, Ao Wang2, Chao Bi2, Guoping Zhu2.   

Abstract

Cervical cancer is a serious threat to women's health and lives worldwide. The recovery and survival of cervical cancer can be improved by customizing therapy strategies based on individual-specific gene expression patterns. EFNA1 was reported to be dysregulated in many cancers and associated with their overall survivals, but its prognostic value in cervical cancer is still unclear. In this study, we performed analyses on the single-cell and bulk RNA sequencing data to study the role of EFNA1 in cervical cancer. EFNA1 was found to be significantly upregulated in cervical cancer tissue, especially the cancer cell subgroup within tumors, which was verified by immunohistochemistry. Through Cox regressions, we found that high EFNA1 expression is an independent risk factor for cervical cancer. Nomogram analysis indicated that EFNA1 could be a predicting factor for the survival probabilities of cervical cancer. Gene ontology and pathway analyses showed that EFNA1 was involved in many tumorigenesis pathways, protein, and virus productions. These findings suggested that EFNA1 could be a prognostic biomarker and potential therapeutic target for cervical cancer.
© 2022. The Author(s) under exclusive licence to Japan Human Cell Society.

Entities:  

Keywords:  Cervical cancer; EFNA1; Prognosis; RNA-seq; scRNA-seq

Mesh:

Substances:

Year:  2022        PMID: 35072898     DOI: 10.1007/s13577-022-00679-4

Source DB:  PubMed          Journal:  Hum Cell        ISSN: 0914-7470            Impact factor:   4.174


  29 in total

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Authors:  H Iida; M Honda; H F Kawai; T Yamashita; Y Shirota; B-C Wang; H Miao; S Kaneko
Journal:  Gut       Date:  2005-06       Impact factor: 23.059

2.  EPHA2/EFNA1 expression in human gastric cancer.

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Journal:  Cancer Sci       Date:  2005-01       Impact factor: 6.716

3.  Ephrin-A1 facilitates mammary tumor metastasis through an angiogenesis-dependent mechanism mediated by EphA receptor and vascular endothelial growth factor in mice.

Authors:  Dana M Brantley-Sieders; Wei Bin Fang; Yoonha Hwang; Donna Hicks; Jin Chen
Journal:  Cancer Res       Date:  2006-11-01       Impact factor: 12.701

4.  Prevalence of human papillomavirus in cervical cancer: a worldwide perspective. International biological study on cervical cancer (IBSCC) Study Group.

Authors:  F X Bosch; M M Manos; N Muñoz; M Sherman; A M Jansen; J Peto; M H Schiffman; V Moreno; R Kurman; K V Shah
Journal:  J Natl Cancer Inst       Date:  1995-06-07       Impact factor: 13.506

5.  Cancer incidence and mortality worldwide: sources, methods and major patterns in GLOBOCAN 2012.

Authors:  Jacques Ferlay; Isabelle Soerjomataram; Rajesh Dikshit; Sultan Eser; Colin Mathers; Marise Rebelo; Donald Maxwell Parkin; David Forman; Freddie Bray
Journal:  Int J Cancer       Date:  2014-10-09       Impact factor: 7.396

6.  Global cancer statistics 2018: GLOBOCAN estimates of incidence and mortality worldwide for 36 cancers in 185 countries.

Authors:  Freddie Bray; Jacques Ferlay; Isabelle Soerjomataram; Rebecca L Siegel; Lindsey A Torre; Ahmedin Jemal
Journal:  CA Cancer J Clin       Date:  2018-09-12       Impact factor: 508.702

7.  Hypoxia-Induced Cleavage Of Soluble ephrinA1 From Cancer Cells Is Mediated By MMP-2 And Associates With Angiogenesis In Oral Squamous Cell Carcinoma.

Authors:  Ting-Ting Ma; Lin Wang; Jun-Lin Wang; Yan-Jie Liu; Yu-Cong Chen; Hu-Jie He; Yong Song
Journal:  Onco Targets Ther       Date:  2019-10-14       Impact factor: 4.147

8.  Human papillomavirus and cervical cancer.

Authors:  Emma J Crosbie; Mark H Einstein; Silvia Franceschi; Henry C Kitchener
Journal:  Lancet       Date:  2013-04-23       Impact factor: 79.321

9.  Genomic profiling of rectal adenoma and carcinoma by array-based comparative genomic hybridization.

Authors:  Zhi-Zhou Shi; Yue-Ming Zhang; Li Shang; Jia-Jie Hao; Tong-Tong Zhang; Bo-Shi Wang; Jian-Wei Liang; Xi Chen; Ying Zhang; Gui-Qi Wang; Ming-Rong Wang; Yu Zhang
Journal:  BMC Med Genomics       Date:  2012-11-16       Impact factor: 3.063

10.  A Five-Genes-Based Prognostic Signature for Cervical Cancer Overall Survival Prediction.

Authors:  Menghuang Zhao; Wenbin Huang; Shuangwei Zou; Qi Shen; Xueqiong Zhu
Journal:  Int J Genomics       Date:  2020-03-25       Impact factor: 2.326

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