Literature DB >> 35068973

Two new species in the fern genus Lomariopsis (Lomariopsidaceae) from East Asia.

Yi-Hsuan Wu1, Chih-Yun Sun2, Atsushi Ebihara3, Ngan Thi Lu4,5, Germinal Rouhan6, Li-Yaung Kuo1,2.   

Abstract

Two East Asian Lomariopsis (Lomariopsidaceae, Polypodiales) species, Lomariopsismoorei and Lomariopsislongini, which were previously misidentified as L.spectabilis, are here described as new species based on evidence from morphological characters and a molecular phylogeny. The two species differ from the three other described species in East Asia by their venation, pinna shapes, and perine morphology. A phylogeny based on a combined dataset of three chloroplast regions (rbcL+ rps4-trnS + trnL-L-F) showed that L.moorei and L.longini each formed a well-supported monophyletic group which was distantly related to both L.spectabilis and the other morphologically similar East Asian species, L.boninensis. Yi-Hsuan Wu, Chih-Yun Sun, Atsushi Ebihara, Ngan Thi Lu, Germinal Rouhan, Li-Yaung Kuo.

Entities:  

Keywords:  Cryptic species; Lomariopsisboninensis; Lomariopsislongini; Lomariopsismoorei; Lomariopsisspectabilis; independent gametophyte; phylogeny; systematics

Year:  2021        PMID: 35068973      PMCID: PMC8712500          DOI: 10.3897/phytokeys.187.77035

Source DB:  PubMed          Journal:  PhytoKeys        ISSN: 1314-2003            Impact factor:   1.635


Introduction

Fée is the most species rich genus in the fern family and contains approximately 60 spp., accounting for 85% of the family (PPG I 2016). This genus has a wide distribution in tropical and subtropical regions; there are 15 species in the Neotropics (Moran 2000), nine species in Africa (Roux 2009), 11 species in the islands of the Indian Ocean (Holttum 1939b; Roux 2009; Rakotondrainibe and Jouy 2017), and 12 species in Asia and the Oceanian region (Holttum 1932, 1939a, 1966, 1978). The latest phylogeny of included 24 species (ca. 40% of the species diversity in ), but only two species from Asia and the Oceanian region have been sampled (Chen et al. 2017) while the vast majority (ca. 10 species) from these areas have not yet been surveyed. In addition, because gametophytes of species are able to establish as long-lived, asexual colonies in the wild (Watkins and Moran 2019), several species are found as gametophyte-only populations, which is called independent gametophytes (Pinson et al. 2017). In Japan and Taiwan, gametophytes of unknown species have been also reported (Ebihara et al. 2013; Wu et al. in press), a finding which further points out that the efforts of systematics research for Asian remains inadequate, and there might have been undocumented and cryptic species. To investigate phylogenetically from these poorly sampled areas, we sampled most Asian and Oceanian species, including all species in East Asia where two previously unidentified species were discovered. They both had been misidentified as Mett. One was from Chiayi County in Taiwan and Hainan Island in China, and the other one was from northern Vietnam and west southern China. They are superficially similar to two Asian species, Nakai and in morphology. In this study, we presented a new phylogeny supplied with comprehensive East Asian sampling, and reevaluated diagnostic characters leading to the description of these species.

Materials and methods

Perine morphology and spore number in sporangia

Spores were taken from mature sporangia and fixed on double-sided tape, and then gold coated with a sputter-coater for 1–3 min. Spores were subsequently examined with a tabletop SEM (TM 3000; Hitachi, Ibaraki, Japan). To examine the spore number per sporangium, at least five mature, unopened sporangia per specimen were collected. These sporangia were broken individually, and we counted the number of spores inside under a stereomicroscope.

DNA extraction and chloroplast DNA region sequencing

Twenty-nine samples were included in our molecular phylogenetic study. Voucher information is provided in Appendix 1 (i.e., those samples noted with *). Total DNA extraction was done following the modified CTAB protocol of Kuo (2015). Three chloroplast (cp) regions were amplified and sequenced: trnL-L-F (trnL gene + trnL-trnF intergenic spacer), the gene rbcL, and rps4-trnS (rps4 gene + intergenic spacer), which were also used in previous phylogenies of and (Rouhan et al. 2007; Li et al. 2009; Chen et al. 2017). The primers used for PCR amplification and sequencing were: FernL 1Ir1 (Li et al. 2010) and f (Taberlet et al. 1991) for trnL-L-F; rps5 (Nadot et al. 1994) and trnS (Souza-Chies et al. 1997) for rps4-trnS; af (Hasebe et al. 1994) and 1379R (Pryer et al. 2001) for rbcL. PCR amplifications were prepared in 15 μL reactions each containing 20 ng of genomic DNA, 1× SuperRed PCR Master Mix RED (TOOLS, Newtaipei City, Taiwan) and 0.5 μM of each primer. A typical amplification program began with one initial denaturation step for 5 min at 94 °C then 35 cycles of 1 min at 94 °C, 30 s at 55 °C, and 1 min at 72 °C followed by a final extension of 10 min at 72 °C and was performed on a SimpliAmp Thermal Cycler. PCR products were cleaned using ExoSAP-IT (Thermo Fisher Scientific, Waltham, Massachusetts, USA), and then sequenced with the same PCR primers with an ABI 3730XL (Thermo Fisher Scientific, Waltham, Massachusetts, USA) by the Genomics BioSci. & Tech. company in Taiwan. GenBank accession numbers of the sequences are listed in Appendix 1.

Phylogenetic analyses

In total, we sampled 35 species, including African/Malagasy and Neotropical members sequenced in previous studies (Rouhan et al. 2007; Lehtonen and Cárdenas 2019), and representatives from the three remaining genera (Chen et al. 2017) as outgroups. Importantly, our sampling covered almost all Asian and Oceanian species (Holttum 1932, 1939a, 1939b, 1978, Moran 2000), including four of which were phylogenetically investigated for the first time. Before this study, three species were known to be distributed in East Asia: (C.Presl) Holttum (syn. Fée,), Ching, and . The materials of East Asian “” belonged to either or one of the two new species described here. Except for , all East Asian species were included in our sampling. Voucher information for all samples is provided in Appendix 1. The sequences were aligned using MUSCLE (Edgar 2004) as implemented in AliView (Larsson 2014). The alignment of every coding gene was further divided into three partitions based on the codon positions. The portions of rps4-trnS IGS (intergenic spacer), trnL gene, and trnL-F IGS were each treated as an independent partition as well. In the phylogenetic analyses, each partition was assigned the appropriate substitution model, which was inferred by ModelFinder (Kalyaanamoorthy et al. 2017) and using the Bayesian information criterion (BIC, Schwarz 1978). We used IQtree 1.6.8 (Nguyen et al. 2015) to infer maximum likelihood (ML) phylogenies with 1,000 standard bootstrap replicates. The Bayesian phylogenetic analysis was performed using Mr Bayes 3.2.7 (Ronquist et al. 2012). Two simultaneous runs were carried out with four chains (5 × 106 generations each). Each chain was sampled every 1,000 generations. Log likelihoods of MCMC runs were inspected in Tracer 1.6 (Rambaut and Drummond 2013) to confirm their convergence. The first 25% of the generations were conservatively discarded as burn-in.

Results

The combined cpDNA alignment matrix included 3,817 nucleotide sites: rbcL (1,431 bp), rps4-trnS (1,233 bp), and trnL-L-F (1,153 bp) with 27.5% of variable sites. In our phylogeny (Fig. 1), the two new species, and , each formed a monophyletic group, and were genetically distant from , , and other Asian and Oceanian species. The line drawings of the two new species are provided in Figs 2 and 3, and their morphological comparisons with the two Asian relatives are summarized in Table 1. Perine morphology of the four species is shown in Fig. 4.
Figure 1.

Maximum likelihood (ML) tree based on the cpDNA rbcL + rps4-trnS + trnL-L-F dataset. Bootstrap supports (BS) and Bayesian inference posterior probabilities (BI PP) are indicated on each branch as BS/BI PP. The arrows indicate the clades consisting of Asian and Oceanian species.

Figure 2.

Illustration of L.Y.Kuo & Y.H.Wu, sp. nov., based on the holotype P.K. Loc et al. 5095 (P00888363).

Figure 3.

Illustration of Y.H.Wu & L.Y.Kuo, sp. nov., based on the holotype Y.H. Wu YX052 (TAIF). A fallen fertile pinna is at the left bottom.

Table 1.

Morphological comparisons of the two new species with their Asian morphologically similar relatives.

Characters L.moorei L.longini L.boninensis L.spectabilis
Vein apices ending at the laminar marginsyesnoyesyes
Widest part at upper pinna<1/2<1/3<1/2~1/2
Stipe scalesdark brown, narrowly lanceolate (usually < 2 mm wide)dark brown, broadly lanceolate (usually >3 mm wide)dark brown, broadly lanceolate (usually >2 mm wide)light brown, narrowly lanceolate (usually <2 mm wide)
Fertile pinna pairs10–143–94–166–14
Swollen ring on articulate at abaxial side, especially upper pinnae (Fig. 6)obviousobviousinconspicuousinconspicuous
Spore perine (Fig. 4)spinyfoldedspinycristate
Spore number per sporangium64326416 or 32
Figure 4.

Spore perine morphology by SEM ABCD. Scale bars: 15 µm.

Morphological comparisons of the two new species with their Asian morphologically similar relatives. Maximum likelihood (ML) tree based on the cpDNA rbcL + rps4-trnS + trnL-L-F dataset. Bootstrap supports (BS) and Bayesian inference posterior probabilities (BI PP) are indicated on each branch as BS/BI PP. The arrows indicate the clades consisting of Asian and Oceanian species.

Taxonomic treatment

L.Y.Kuo & Y.H.Wu sp. nov. 58E92A43-DA01-510D-8552-191F9C25F153 urn:lsid:ipni.org:names:77234526-1 Figs 2 , 5A
Figure 5.

Stipe scales A (L.Y. Kuo1862, TAIF) B (Y.H. Wu YX052, TAIF). Scale bar: 1 mm.

Diagnosis.

differs from the other similar species, , , and , by its lanceolate upper sterile pinna with the widest portion occurring below the middle of the pinna, and the veins end ca. 0.5 mm before the margins. Illustration of L.Y.Kuo & Y.H.Wu, sp. nov., based on the holotype P.K. Loc et al. 5095 (P00888363).

Type.

Vietnam. Ha Tinh. Huong Son District: Son Kim Municipality, Rao Bun stream, 4 May 2004, P.K. Loc 5095 (holotype: P [P00888363]! isotype: MO!).

Description.

Rhizomes stramineous, 0.7–1.2 cm in diam., densely scaly; rhizome scales brown (but blackened at point of attachment), lanceolate, ca. 4–9 × 1.5–3.7 mm. Fronds 1-pinnate, leathery, mature laminae pinnate, dimorphic. Sterile fronds 30–60 cm long, stipes stramineous, 10–20 cm, grooved adaxially, base with scattered scales, lateral pinnae 3–9 pairs, lanceolate, widest in the lower third, 7–16 × 1.5–1.7 cm, apex acuminate; pinna bases cuneate and decurrent, margins entire; lateral pinnae articulate to rachis, swollen ring on abaxial articulation, terminal pinna with a similar size as lateral pinnae, not articulate; upper part of rachis narrowly winged; veins free, simple or furcate, oblique, not extended to margin. Fertile laminae similar to sterile laminae but pinnae much contracted; pinnae linear, 10–20 × ca. 0.2 cm, equilateral, stalks 0.5–1.1 cm, pinna rachis articulate. Sori acrostichoid. Spores 32 per sporangium, perine with cristae.

Paratypes.

Vietnam. Nghe An Province: 28 Oct 2014, L.B. Zhang, L. Zhang & N.T. Lu 7185 (CDBI, MO, VNMN); Quang Binh Province: Bo Trach District, Phong Nha-ke Bang National Park, 7 Dec 2004, S.K. Wu and L.K. Phan WP897 (KUN); 13 Dec 2004, WP1124 (KUN); Quang Tri Province: Dakrong District, Trieu Nguyen Commune, 4 Nov 2009, Y.H. Chang 20091104-005 (TAIF); 2 Nov 2009, C.W. Chen Wade 983 (TAIF); Vinh Phuc Province: Tam Dao District, Tam Dao National Park, 14 Dec 2010, L.Y. Kuo 1862 (TAIF, VNMN). China. Yunnan Province: 25 Aug 2014, Q. Wei WQ243 (KUN); 2 Sep 2011, S.Y. Dong 3597 (IBSC); 28 Mar 1987, W.M. Ju et H.C. Yan Ju and Yan 21930 (IBK).

Distribution.

Northern Vietnam, west southern China (Yunnan).

Ecology.

In shaded places, understory of evergreen broad leaf forests, below 1,000 m in elevation.

Etymology.

The lanceolate shape of the terminal pinnae of sterile leaves is similar to the holy lance, which is also called Lance of Longinus. Y.H.Wu & L.Y.Kuo sp. nov. C72B93F6-6AA5-5043-A3E6-2EAC88138B90 urn:lsid:ipni.org:names:77234527-1 Figs 3 , 5B , 6A
Figure 6.

Articulation of upper pinnae (abaxial surface) to the rachis A (Y.H. Wu YX052, TAIF) B (TNS790636).

is most similar to , but scales on stipes are narrower (usually < 2 mm) in (Fig. 5B) and broader (usually > 2 mm) in . The swollen ring at the region of articulation on the abaxial side (especially upper pinnae) is more obvious in (Table 1; Fig. 6A). Spore perine morphology by SEM ABCD. Scale bars: 15 µm. Illustration of Y.H.Wu & L.Y.Kuo, sp. nov., based on the holotype Y.H. Wu YX052 (TAIF). A fallen fertile pinna is at the left bottom. Stipe scales A (L.Y. Kuo1862, TAIF) B (Y.H. Wu YX052, TAIF). Scale bar: 1 mm. Articulation of upper pinnae (abaxial surface) to the rachis A (Y.H. Wu YX052, TAIF) B (TNS790636). Taiwan. Chiayi County: Dapu Township, Zengwen Reservoir, 9 November 2020, Y.H. Wu YX052 (holotype: TAIF! isotype: TAIF!). Rhizomes rufous, 1.0–1.2 cm in diam., densely scaly; rhizome scales reddish brown (but blackened at point of attachment), narrowly lanceolate, ca. 4–6 × 0.9–2.2 mm. Fronds 1-pinnate, leathery, juvenile sterile laminae simple, shortly stalked, narrowly lanceolate, 20–25 × 1.0–1.5 cm, base narrowly cuneate, apex acute; mature lamina pinnate, dimorphic. Sterile fronds 30–50 cm long, stipes green, 10–20 cm, grooved adaxially, base with scattered scales, lateral pinnae 6–14 pairs, 1–5 cm apart, narrowly lanceolate, widest in the proximal half, 14–21 × 1.5–2.2 cm, narrowly cuneate, apex acute, base cuneate and decurrent, margin entire or slightly undulate; lateral pinnae articulate to rachis, swollen ring on abaxial articulation, terminal pinna 16–27 × 1.5–2.2 cm, not articulate; upper part of rachis narrowly winged; veins free, simple or furcate, oblique. Fertile laminae similar to sterile laminae but pinnae much contracted; pinnae linear, 10–20 × ca. 0.3 cm, equilateral, pinna rachis 0.3–0.8 cm wide, rachis articulate. Sori acrostichoid; perine consisting with glandular projections. Spores green (= chlorophyllous) and spiny, 64 per sporangium. Taiwan. Chiayi County: Dapu Township, Zengwen Reservoir, 9 Nov 2020, Y.H. Wu YX053 (TAIF). China. Hainan Province: Wuzhishan City, Mt. Wuzhi National Nature Reserve, 16 July 2007, Y.S. Chao 1211 (TAIF); Mt. Diaoluo, 27 Feb 2012, W.H. Wu 1062 (TAIF); 21 Nov 2000, G.M. Zhang et D. Li 117 (PE); 14 Dec 2003, S.Y. Dong 1045 (PE). Taiwan (Chiayi County) and China (Hainan Is.). In shaded places, understory of evergreen broadleaf forests, below 1,000m in elevation. The name moorei is dedicated to Dr./Mr. Shann-Jye Moore (1966–2010), an enthusiastic fern taxonomist and knowledgeable pteridologist from Taiwan. The Mr. Shann-Jye Moore Memorial Scholarship has been established by the Taiwan Society of Plant Systematics to commemorate his passions, and to support Taiwanese students studying the systematics of ferns and lycophytes.

Note.

We have not yet found entire sporophyll from the type locality, but fallen fertile pinnae on14 Aug 2020 (Fig. 3), which contained intact sporangia with green spores. Although mature sporophytes were found to have a restricted distribution in Taiwan, independent gametophytes of this species were found throughout Taiwan Main Is using a DNA-identification approach to survey gametophyte populations (Wu et al. in press).

Discussion

In previous molecular phylogenies of , none of Oceanian species were included, and and (including the misidentified and ) were the only Asian species (Rouhan et al. 2007; Li et al. 2009; Chen et al. 2017). Here, with a comprehensive sampling in these areas, the present phylogeny (Fig. 1) provides new insights into the evolutionary relationships and systematics for species from these areas. In the present tree, the nine Asian/Oceanian species are retrieved into two well-supported clades. The first clade consists of only, while the second clade accommodates the remaining eight species. These Asian and Oceanian clades are either nested within, or closely related to other paleotropical species (Africa and Madagascar), but their inter-clade relationships remain unclear (Fig. 1). Data from additional genetic regions will be necessary to better resolve the uncertainties of these nodes, and hence to confirm biogeographical origin(s) of Asian/Oceanian taxa. Among all six described East Asian species, is the only one missing from the current phylogeny. To the best of our knowledge, this species has only been collected once, as the type collections. Despite the lack of phylogenetic information, is morphologically unique in the genus and easily distinguished from other species because of its reticulate leaf venation. species diversity in Asia and Oceania could still be underestimated, and more undocumented species could be eventually revealed by phylogenetic analyses using multiple specimens in each morphologically-defined species, similar to the case of discovering the two new species here described. Indeed, and , together with , are genetically distant taxa in East Asia even if all three have been long misidentified and confused under a single name of the South East Asian species, , due to their overall similar morphology (DeVol and Kuo 1975; Tsai and Shieh 1994; Iwatsuki et al. 1995; Yang and Liu 2002; Li et al. 2009; Phan 2010; Xing et al. 2013; Knapp 2014; Chen et al. 2017; Ebihara 2017; TPG 2019). However, clear molecular phylogenetic results spurred us to seek other characters supporting the distinction between these lineages, and these actual species now can be identified based on microscopic characters (Table 1). These characters include perine ornamentation, which has been revealed to have highly diversified forms in (Rouhan et al. 2007). Additionally, we found that the spore number per sporangium varies among these species, which can also help in distinguishing species. However, unlike most cases in ferns of the , such a reduction in the number of spores in sporangia (e.g., 64 to 32) may not represent a reproductive switch to apomixis for (Chen et al. 2017). Further cytological investigations, e.g., through flow cytometry to infer both spore vs. leaf genome sizes (Kuo et al. 2017), are necessary to clarify whether changes in the two phenomena (i.e., spore number per sporangium and reproductive mode) are linked in these species.
1Sterile lateral pinnae with lateral veins spreading (borne at nearly right angles to the pinna rachis), free, occasionally anastomosing L.chinensis
Sterile lateral pinnae with veins oblique, free 2
2Sterile lateral pinnae, abruptly narrowed to a caudate apex (2–3 cm long) L.lineata
Sterile lateral pinnae with acuminate apex 3
3Sterile lateral pinnae lanceolate, widest in the lower third L.longini
Sterile lateral pinnae narrowly lanceolate, widest in the middle 4
4Sterile lateral pinnae with pinna stalks (0.3–0.7 cm long), base equilateral L.spectabilis
Sterile lateral pinnae with, pinna subsessile, base cuneate and decurrent 5
5Swollen ring inconspicuous on abaxial articulation (especially upper pinnae), scales on the stipes broadly lanceolate (> 2 mm wide) L.boninensis
Swollen ring obvious on abaxial articulation side (especially upper pinnae), scales on the stipes narrowly lanceolate (< 2 mm wide) L.moorei

Voucher information and GenBank accession numbers. –, sequences not available. *sequences obtained in this study.

Species nameLocalityVoucher (Herbarium)GenBank accession number
rbcL rps4-trnS trnL-L-F
Cyclopeltiscrenata China, HainanWu935 (TAIF)OL420736*OL473642*OL473665*
Cyclopeltisnovoguineensis Solomon IslandsSITW068 (TAIF) KY397974 KY397978 KY397970
Cyclopeltissemicordata Costa RicaCJR et al. 08-195 (DUKE) EF463234 KY397977 KY397969
Dracoglossumplantagineum GuadeloupeChristenhusz 4065 (TUR) KY397975 KC914565 KY397971
Dryopolystichumphaeostigma Solomon IslandsSITW10443 (BSIP, TAIF, TNM) KY397972 KY397976 KY397968
Lomariopsisaff.brackenridgei Vanuatu, Espiritu Santo Is.Matsumoto 01-857 (TNS)--OL473666*
Lomariopsisboninensis Japan, Bonin Is.TNS 763923 (TNS) AB575226 OL473643*OL473667*
Lomariopsisboninensis Japan, Ishigaki Is.Ebihara 2957 (TNS)OL420737*OL473644*OL473668*
Lomariopsisboninensis Taiwan, Orchid Is.CYH20091123_03 (TAIF)OL420738*OL473645*OL473669*
Lomariopsisboninensis Taiwan, Orchid Is.CYH20110918_25 (TAIF)-OL473646*OL473670*
Lomariopsisboninensis TaiwanKuo 2423 (TAIF)OL420739*OL473647*OL473671*
Lomariopsisboninensis TaiwanKuo 976 (TAIF)OL420740*OL473648*OL473672*
Lomariopsisbrackenridgei FijiFJ_2011_207 (WELT)OL420741*OL473649*OL473673*
Lomariopsisbrackenridgei French Polynesia, MooreaJNG3191 (UC)--OL473674*
Lomariopsiscf.lineata Unknown OriginF042 (SING)OL420742* AM947063 AM946393
Lomariopsisjapurensis Unknown OriginLehtonen 989 (TUR) MK705752 MK705752 MK705752
Lomariopsiskingii Indonesia, BacanDK1398 (UC)OL420743*OL473650*OL473675*
Lomariopsiskingii New GuineaDK2800 (UC)OL420744*OL473651*OL473676*
Lomariopsisleptocarpa MicronesiaMasuda 6919 (TNS)OL420745*OL473652*OL473677*
Lomariopsislineata Indonesia, SulawesiDK925 (UC)OL420746*OL473653*OL473678*
Lomariopsislineata PhilippinesKuo 2052 (TAIF)OL420747*OL473654*OL473679*
Lomariopsislineata PhilippinesWade 3946 (TAIF)--OL473680*
Lomariopsisnovaecaledoniae New CaledoniaNakamura 2157 (TNS)-OL473655*OL473681*
Lomariopsissorbifolia GuadeloupeChristenhusz 4070 (TUR) EF463236 OL473656*OL473682*
Lomariopsislongini China, YunnanDong 3597 (IBSC)OL420748*OL473657*OL473683*
Lomariopsislongini China, YunnanWQ243 (KUN)OL420749*OL473658*OL473684*
Lomariopsislongini VietnamWade983 (TAIF)OL420750*OL473659*OL473685*
Lomariopsislongini VietnamZhang et al.7185 KU605187 KU605086 KU605107
Lomariopsislongini VietnamWP897 (KUN)--OL473686*
Lomariopsislongini VietnamWP1124 (KUN)--OL473687*
Lomariopsismoorei TaiwanYX052 (TAIF)OL420751*OL473660*OL473688*
Lomariopsismoorei China, HainanHN197 (PE)OL420752*OL473661*OL473689*
Lomariopsismoorei TaiwanHa 10**--OL473690*
Lomariopsismoorei China, HainanWu 1062 (TAIF)OL420753*OL473662*OL473691*
Lomariopsisspectabilis Indonesia, JavaWade 1100 (TAIF)OL420754*OL473663*OL473692*
Lomariopsisspectabilis Indonesia, JavaWade 1838 (TAIF)OL420755*OL473664*OL473693*
Lomariopsiscordata MadagascarRakotondrainibe 1771 (P)-- DQ396558
Lomariopsiscrassifolia MadagascarJanssen et al. 2527 (P)-- DQ396602
Lomariopsiscrassifolia MadagascarHumblot 442 (P)-- DQ396559
Lomariopsisguineensis Sierra LeoneFay & Fay s.n., in 1985 (NY)-- DQ396560
Lomariopsishederacea CameroonRaynal 9954 (P)-- DQ396561
Lomariopsisjamaicensis JamaicaMaxon & Killip 1463 (NY)-- DQ396562
Lomariopsisjapurensis EcuadorMoran 6021 (NY, QCA, QCNE)-- DQ396566
Lomariopsisjapurensis EcuadorMoran 6061 (NY, QCA, QCNE)-- DQ396565
Lomariopsisjapurensis Costa RicaMoran 6381(CR, INB, NY)-- DQ396567
Lomariopsisjapurensis BoliviaSundue 708 (LPB, NY, USZ)-- DQ396563
Lomariopsisjapurensis PeruBell 88180 (NY)-- DQ396564
Lomariopsisjapurensis BoliviaJimenez 2016 (LPB, NY)-- DQ396568
Lomariopsiskunzeana HaitiZanoni 28649 (EHH, NY)-- DQ396570
Lomariopsiskunzeana United StatesPeck s.n. (NY)-- DQ396569
Lomariopsislatipinna EcuadorMoran 6027 (NY, QCA, QCNE, TUR)-- DQ396571
Lomariopsislineata ThailandLarsen 45851 (AAU, NY)-- DQ396572
Lomariopsislongicaudata MadagascarJanssen 2493 (P)-- DQ396574
Lomariopsislongicaudata MadagascarRakotondrainibe 6191 (P)-- DQ396573
Lomariopsismadagascarica MadagascarKessler 12786 (NY)-- DQ396575
Lomariopsismadagascarica MadagascarDecary 18186 (P)-- DQ396576
Lomariopsismannii Democratic Republic Of CongoKassner s.n., in 1914 (P)-- DQ396577
Lomariopsismarginata BrazilPires et al. 50316 (NY)-- DQ396579
Lomariopsismarginata BrazilAmorim 1920 (CEPEC, NY)-- AY540045
Lomariopsismarginata BrazilLabiak 104 (NY, UPCB)-- DQ396578
Lomariopsismaxonii Costa RicaMoran 4172 (CR, NY, UC)-- DQ396580
Lomariopsismaxonii Costa RicaSmith 1660 (CR, NY, UC)-- DQ396581
Lomariopsisnigropaleata EcuadorMoran 6053 (NY)-- DQ396584
Lomariopsisnigropaleata BoliviaJimenez 1949 (LPB, NY)-- DQ396583
Lomariopsispalustris Sierra LeoneFay 1124 (NY)-- DQ396585
Lomariopsispervillei MadagascarRakotondrainibe et al. 6626 (P)-- DQ396586
Lomariopsispervillei MadagascarRakotondrainibe et al. 6623 (P)-- DQ396587
Lomariopsiswarneckei ComorosRakotondrainibe et al. 6707 (P)-- DQ396588
Lomariopsispollicina MadagascarKessler 12785 (GOET, NY)-- DQ396589
Lomariopsisprieuriana VenezuelaCortez 475 (NY, VEN)-- DQ396591
Lomariopsisprieuriana PanamaMoran 5080 (MO, NY, PMA)-- DQ396590
Lomariopsisrecurvata MexicoRivera 1343 (NY)-- DQ396592
Lomariopsisrecurvata MexicoHernandez 2286 (NY)-- DQ396593
Lomariopsisrossii LiberiaFay 1237 (NY)-- DQ396594
Lomariopsissalicifolia EcuadorMoran 6022 (AAU, NY, QCA, QCNE, TUR)-- DQ396597
Lomariopsissalicifolia EcuadorMoran 6129 (NY, QCA, QCNE)-- DQ396595
Lomariopsissalicifolia EcuadorMoran 6956 (NY, QCA, QCNE)-- DQ396596
Lomariopsiswarneckei MadagascarJanssen et al. 2444 (P)-- DQ396601
Lomariopsiswarneckei MadagascarRouhan et al. 318 (P)-- DQ396603
Lomariopsisvestita Costa RicaMoran 6382 (CR, INB, NY, USJ)-- DQ396598
Lomariopsisvestita Costa RicaFolsom 9011 (NY)-- DQ396599
Lomariopsiswrightii CubaUnderwood 948 (NY)-- DQ396600
  12 in total

1.  MUSCLE: multiple sequence alignment with high accuracy and high throughput.

Authors:  Robert C Edgar
Journal:  Nucleic Acids Res       Date:  2004-03-19       Impact factor: 16.971

2.  Universal primers for amplification of three non-coding regions of chloroplast DNA.

Authors:  P Taberlet; L Gielly; G Pautou; J Bouvet
Journal:  Plant Mol Biol       Date:  1991-11       Impact factor: 4.076

3.  Tissue-direct PCR, a rapid and extraction-free method for barcoding of ferns.

Authors:  F-W Li; L-Y Kuo; Y-M Huang; W-L Chiou; C-N Wang
Journal:  Mol Ecol Resour       Date:  2009-07-17       Impact factor: 7.090

4.  Evaluating the spore genome sizes of ferns and lycophytes: a flow cytometry approach.

Authors:  Li-Yaung Kuo; Yi-Jia Huang; JenYu Chang; Wen-Liang Chiou; Yao-Moan Huang
Journal:  New Phytol       Date:  2016-11-07       Impact factor: 10.151

5.  rbcL data reveal two monophyletic groups of filmy ferns (Filicopsida: Hymenophyllaceae).

Authors:  K M Pryer; A R Smith; J S Hunt; J Y Dubuisson
Journal:  Am J Bot       Date:  2001-06       Impact factor: 3.844

6.  rbcL gene sequences provide evidence for the evolutionary lineages of leptosporangiate ferns.

Authors:  M Hasebe; T Omori; M Nakazawa; T Sano; M Kato; K Iwatsuki
Journal:  Proc Natl Acad Sci U S A       Date:  1994-06-07       Impact factor: 11.205

7.  AliView: a fast and lightweight alignment viewer and editor for large datasets.

Authors:  Anders Larsson
Journal:  Bioinformatics       Date:  2014-08-05       Impact factor: 6.937

8.  IQ-TREE: a fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies.

Authors:  Lam-Tung Nguyen; Heiko A Schmidt; Arndt von Haeseler; Bui Quang Minh
Journal:  Mol Biol Evol       Date:  2014-11-03       Impact factor: 16.240

9.  Phylogenetic analyses place the monotypic Dryopolystichum within Lomariopsidaceae.

Authors:  Cheng-Wei Chen; Michael Sundue; Li-Yaung Kuo; Wei-Chih Teng; Yao-Moan Huang
Journal:  PhytoKeys       Date:  2017-04-07       Impact factor: 1.635

10.  ModelFinder: fast model selection for accurate phylogenetic estimates.

Authors:  Subha Kalyaanamoorthy; Bui Quang Minh; Thomas K F Wong; Arndt von Haeseler; Lars S Jermiin
Journal:  Nat Methods       Date:  2017-05-08       Impact factor: 28.547

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  1 in total

1.  Integrating tissue-direct PCR into genetic identification: An upgraded molecular ecology approach to survey fern gametophytes in the field.

Authors:  Yi-Hsuan Wu; Ya-Ting Ke; Yuan-Yao Chan; Goang-Jiun Wang; Li-Yaung Kuo
Journal:  Appl Plant Sci       Date:  2022-03-17       Impact factor: 2.511

  1 in total

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