Literature DB >> 35063071

Counting protein molecules for single-cell proteomics.

Nikolai Slavov1.   

Abstract

Technologies for counting protein molecules are enabling single-cell proteomics at increasing depth and scale. New advances in single-molecule methods by Brinkerhoff and colleagues promise to further increase the sensitivity of protein analysis and motivate questions about scaling up the counting of the human proteome.
Copyright © 2021 Elsevier Inc. All rights reserved.

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Year:  2022        PMID: 35063071      PMCID: PMC8855622          DOI: 10.1016/j.cell.2021.12.013

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  10 in total

1.  A dream of single-cell proteomics.

Authors:  Vivien Marx
Journal:  Nat Methods       Date:  2019-09       Impact factor: 28.547

Review 2.  Single-Cell Proteomics.

Authors:  Luke F Vistain; Savaş Tay
Journal:  Trends Biochem Sci       Date:  2021-02-27       Impact factor: 13.807

3.  Unpicking the proteome in single cells.

Authors:  Nikolai Slavov
Journal:  Science       Date:  2020-01-31       Impact factor: 47.728

4.  A Unique Microglia Type Associated with Restricting Development of Alzheimer's Disease.

Authors:  Hadas Keren-Shaul; Amit Spinrad; Assaf Weiner; Orit Matcovitch-Natan; Raz Dvir-Szternfeld; Tyler K Ulland; Eyal David; Kuti Baruch; David Lara-Astaiso; Beata Toth; Shalev Itzkovitz; Marco Colonna; Michal Schwartz; Ido Amit
Journal:  Cell       Date:  2017-06-08       Impact factor: 41.582

5.  Multiple rereads of single proteins at single-amino acid resolution using nanopores.

Authors:  Henry Brinkerhoff; Albert S W Kang; Jingqian Liu; Aleksei Aksimentiev; Cees Dekker
Journal:  Science       Date:  2021-11-04       Impact factor: 47.728

6.  Driving Single Cell Proteomics Forward with Innovation.

Authors:  Nikolai Slavov
Journal:  J Proteome Res       Date:  2021-10-01       Impact factor: 4.466

Review 7.  The emerging landscape of single-molecule protein sequencing technologies.

Authors:  Javier Antonio Alfaro; Peggy Bohländer; Mingjie Dai; Mike Filius; Cecil J Howard; Xander F van Kooten; Shilo Ohayon; Adam Pomorski; Sonja Schmid; Amit Meller; Chirlmin Joo; Aleksei Aksimentiev; Eric V Anslyn; Georges Bedran; Chan Cao; Mauro Chinappi; Etienne Coyaud; Cees Dekker; Gunnar Dittmar; Nicholas Drachman; Rienk Eelkema; David Goodlett; Sébastien Hentz; Umesh Kalathiya; Neil L Kelleher; Ryan T Kelly; Zvi Kelman; Sung Hyun Kim; Bernhard Kuster; David Rodriguez-Larrea; Stuart Lindsay; Giovanni Maglia; Edward M Marcotte; John P Marino; Christophe Masselon; Michael Mayer; Patroklos Samaras; Kumar Sarthak; Lusia Sepiashvili; Derek Stein; Meni Wanunu; Mathias Wilhelm; Peng Yin
Journal:  Nat Methods       Date:  2021-06-07       Impact factor: 47.990

8.  An Optimized Shotgun Strategy for the Rapid Generation of Comprehensive Human Proteomes.

Authors:  Dorte B Bekker-Jensen; Christian D Kelstrup; Tanveer S Batth; Sara C Larsen; Christa Haldrup; Jesper B Bramsen; Karina D Sørensen; Søren Høyer; Torben F Ørntoft; Claus L Andersen; Michael L Nielsen; Jesper V Olsen
Journal:  Cell Syst       Date:  2017-06-07       Impact factor: 10.304

9.  Single-cell proteomic and transcriptomic analysis of macrophage heterogeneity using SCoPE2.

Authors:  Harrison Specht; Edward Emmott; Aleksandra A Petelski; R Gray Huffman; David H Perlman; Marco Serra; Peter Kharchenko; Antonius Koller; Nikolai Slavov
Journal:  Genome Biol       Date:  2021-01-27       Impact factor: 13.583

10.  BioNumbers--the database of key numbers in molecular and cell biology.

Authors:  Ron Milo; Paul Jorgensen; Uri Moran; Griffin Weber; Michael Springer
Journal:  Nucleic Acids Res       Date:  2009-10-23       Impact factor: 16.971

  10 in total
  1 in total

1.  Increasing the throughput of sensitive proteomics by plexDIA.

Authors:  Jason Derks; Andrew Leduc; Georg Wallmann; R Gray Huffman; Matthew Willetts; Saad Khan; Harrison Specht; Markus Ralser; Vadim Demichev; Nikolai Slavov
Journal:  Nat Biotechnol       Date:  2022-07-14       Impact factor: 68.164

  1 in total

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