| Literature DB >> 35062705 |
Stefano Fontana1, Gabriele Buttinelli1, Stefano Fiore1, Concetta Amato1, Marco Pataracchia1, Majlinda Kota2, Jela Aćimović3, Mia Blažević4, Mirsada Mulaomerović4, Lubomira Nikolaeva-Glomb5, Andreas Mentis6, Androniki Voulgari-Kokota6, Luljeta Gashi7, Pranvera Kaçaniku-Gunga7, Christopher Barbara8, Jackie Melillo9, Jelena Protic10, Svetlana Filipović-Vignjevic11, Patrick M O'Connor12, Alessandra D'Alberto13, Riccardo Orioli13, Andrea Siddu13, Eugene Saxentoff14, Paola Stefanelli1.
Abstract
Here we analyzed six years of acute flaccid paralysis (AFP) surveillance, from 2015 to 2020, of 10 countries linked to the WHO Regional Reference Laboratory, at the Istituto Superiore di Sanità, Italy. The analysis also comprises the polio vaccine coverage available (2015-2019) and enterovirus (EV) identification and typing data. Centralized Information System for Infectious Diseases and Laboratory Data Management System databases were used to obtain data on AFP indicators and laboratory performance and countries' vaccine coverage from 2015 to 2019. EV isolation, identification, and typing were performed by each country according to WHO protocols. Overall, a general AFP underreporting was observed. Non-Polio Enterovirus (NPEV) typing showed a high heterogeneity: over the years, several genotypes of coxsackievirus and echovirus have been identified. The polio vaccine coverage, for the data available, differs among countries. This evaluation allows for the collection, for the first time, of data from the countries of the Balkan area regarding AFP surveillance and polio vaccine coverage. The need, for some countries, to enhance the surveillance systems and to promote the polio vaccine uptake, in order to maintain the polio-free status, is evident.Entities:
Keywords: acute flaccid paralysis; enterovirus; non-polio enteroviruses; polio vaccine coverage; poliovirus; poliovirus surveillance
Year: 2021 PMID: 35062705 PMCID: PMC8779529 DOI: 10.3390/vaccines10010044
Source DB: PubMed Journal: Vaccines (Basel) ISSN: 2076-393X
Six years of AFP surveillance data from Italy, Serbia, Bosnia and Herzegovina, Montenegro, Bulgaria, Kosovo, Albania, North Macedonia, Malta, and Greece.
| Year | Inicators | Albania | Bosnia and Herzegovina | Bulgaria | Greece | Italy | Malta | Montenegro | Serbia | North Macedonia | Kosovo | TOTAL |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
| 5 | 3 | 12 | 18 | 44 | 0 | 1 | 11 | 2 | 0 | 96.00 |
|
| 0.77 | 0.6 |
|
| 0.51 | 0 | 0.86 | 0.65 | 0.59 | 0 | 0.65 | |
|
|
| 67% |
|
| 70% | N.A. |
| 73% |
| N.A. | 88.00% | |
|
| 0.77 | 0.4 |
|
| 0.36 | 0 |
| 0.47 | 0.59 | 0 | 0.53 | |
|
|
| 8 | 10 | 17 | 18 | 68 | 0 | 2 | 10 | 3 | 0 | 134.00 |
|
|
|
|
|
| 0.79 | 0 |
| 0.48 | 0.9 | 0 | 0.90 | |
|
|
|
|
|
| 69% | N.A. | 100% |
|
| N.A. | 94.14% | |
|
|
|
|
|
| 0.54 | 0 |
| 0.43 |
| 0 | 0.77 | |
|
|
| 7 | 5 | 5 | 10 | 49 | 0 | 2 | 10 | 3 | 1 | 92.00 |
|
|
|
| 0.47 | 0.58 | 0.57 | 0 |
| 0.6 | 0.91 | 2 | 0.62 | |
|
|
|
| 60% |
| 67% | N.A. |
| 30% |
| 100% | 82.13% | |
|
|
|
| 0.28 | 0.58 | 0.38 | 0 |
| 0.18 |
|
| 0.45 | |
|
|
| 2 | 1 | 10 | 18 | 39 | 0 | 1 | 8 | 3 | 0 | 82.00 |
|
| 0.32 | 0.43 | 0.94 | 1.1 | 0.45 | 0 | 0.88 | 0.49 | 0.92 | 0 | 0.55 | |
|
|
|
|
|
| 67% | N.A. |
|
|
| N.A. | 91.75% | |
|
| 0.32 | 0.43 |
|
| 0.3 | 0 |
| 0.43 |
| 0 | 0.44 | |
|
|
| 0 | 2 | 12 | 11 | 53 | 1 | 0 | 12 | 3 | 0 | 94.00 |
|
| 0 | 0.43 |
| 0.69 | 0.62 |
| 0 | 0.74 | 0.93 | 0 | 0.63 | |
|
| N.A. |
|
|
| 68% | 100% | 0% |
|
| N.A. | 94.67% | |
|
| 0 | 0.43 |
| 0.69 | 0.42 |
| 0 | 0.74 |
| 0 | 0.52 | |
|
|
| 2 | 1 | 6 | 10 | 31 | 0 | 0 | 5 | 1 | 0 | 56.00 |
|
| 0.33 | 0.22 | 0 | 0.63 | 0.27 | 0 | 0 | 0.06 | 0.31 | 0 | 0.38 | |
|
|
|
|
| 50% | 52% | N.A. | 0% | 60% |
| N.A. | 80.29% | |
|
| 0.33 | 0.22 | 0 | 0.32 | 0.14 | 0 | 0 | 0.04 | 0.31 | 0 | 0.23 |
* Annualized rate per 100,000 children under the age of 15. Bold = meeting WHO target of 1.0. ** Two stool specimens collected at least 24 h apart within 14 days of onset of paralysis and adequately shipped to the laboratory. Bold = meeting WHO target of 80%. *** Surveillance Index = non-polio AFP rate (not to exceed the target) × percent adequate stool collection. Bold = 0.8.
Figure 1Percentage of AFP cases by age.
Figure 2Three doses of polio vaccination coverage from 2015 to 2019 among children aged 12–23 months. Reference value of 95% coverage is shown by red line. Montenegro and North Macedonia lack data from 2019.
Number of samples analyzed by supplementary surveillance activities per country, 2015–2020.
| Year | Italy | Albania | Greece | Malta | Serbia | |
|---|---|---|---|---|---|---|
| Environmental | Enterovirus | Enterovirus | Environmental | Environmental | Enterovirus | |
| 2015 | 206 | 95 | 17 | |||
| 2016 | 194 | 119 | 44 | |||
| 2017 | 231 | 104 | 88 | 8 | 3 | 17 |
| 2018 | 359 | 102 | 151 | 15 | 30 | |
| 2019 | 198 | 135 | 3 | 22 | 3 | 75 |
| 2020 | 198 | 3 | 2 | |||
| Total | 1386 | 555 | 242 | 45 | 9 | 185 |
Figure 3Number and relative percentage of NPEVs identified by type of surveillance and country, 2015–2020.
Number and percentage of typed NPEVs by surveillance and countries.
| Surveillance (Number of NPEVs Typed) | Genotypes by Countries | Number of Genotypes | Percentage of Genotypes by Countries |
|---|---|---|---|
| AFP (N = 22) | BGR | 2 | |
| Human_echovirus_30 | 2 | 100.00% | |
| GRC | 8 | ||
| Human_coxsackievirus_A16 | 2 | 25.00% | |
| Human_echovirus_18 | 2 | 25.00% | |
| Human_enterovirus_71 | 4 | 50.00% | |
| ITA | 10 | ||
| Human_coxsackievirus_B4 | 2 | 20.00% | |
| Human_echovirus_11 | 2 | 20.00% | |
| Human_echovirus_25 | 2 | 20.00% | |
| Human_echovirus_6 | 4 | 40.00% | |
| SRB | 2 | ||
| Human_coxsackievirus_B1-6 | 1 | 50.00% | |
| Human_echovirus_21 | 1 | 50.00% | |
| Enterovirus (N = 72) | GRC | 63 | |
| Human_coxsackievirus_A1 | 1 | 1.59% | |
| Human_coxsackievirus_A8 | 2 | 3.17% | |
| Human_coxsackievirus_A11 | 8 | 12.70% | |
| Human_coxsackievirus_A16 | 5 | 7.94% | |
| Human_coxsackievirus_A17 | 2 | 3.17% | |
| Human_coxsackievirus_A19 | 4 | 6.35% | |
| Human_coxsackievirus_A20 | 5 | 7.94% | |
| Human_coxsackievirus_A24 | 21 | 33.33% | |
| Human_coxsackievirus_B5 | 2 | 3.17% | |
| Human_echovirus_21 | 2 | 3.17% | |
| Human_echovirus_25 | 2 | 3.17% | |
| Human_echovirus_29 | 2 | 3.17% | |
| Human_echovirus_30 | 2 | 3.17% | |
| Human_enterovirus_A76 | 1 | 1.59% | |
| Human_enterovirus_B81 | 1 | 1.59% | |
| Human_enterovirus_C | 3 | 4.76% | |
| SRB | 9 | ||
| Human_echovirus_11 | 9 | 100.00% | |
| Environmental (N = 149) | GRC | 17 | |
| Human_coxsackievirus_A11 | 2 | 11.76% | |
| Human_coxsackievirus_A13 | 4 | 23.53% | |
| Human_coxsackievirus_A24 | 4 | 23.53% | |
| Human_echovirus_11 | 3 | 17.65% | |
| Human_echovirus_30 | 3 | 17.65% | |
| Human_echovirus_9 | 1 | 5.88% | |
| ITA | 132 | ||
| Human_coxsackievirus_A4 | 1 | 0.76% | |
| Human_coxsackievirus_A5 | 2 | 1.52% | |
| Human_coxsackievirus_B2 | 1 | 0.76% | |
| Human_coxsackievirus_B3 | 5 | 3.79% | |
| Human_coxsackievirus_B4 | 17 | 12.88% | |
| Human_coxsackievirus_B5 | 32 | 24.24% | |
| Human_echovirus_1 | 6 | 4.55% | |
| Human_echovirus_11 | 9 | 6.82% | |
| Human_echovirus_12 | 1 | 0.76% | |
| Human_echovirus_13 | 1 | 0.76% | |
| Human_echovirus_14 | 3 | 2.27% | |
| Human_echovirus_18 | 1 | 0.76% | |
| Human_echovirus_19 | 1 | 0.76% | |
| Human_echovirus_3 | 3 | 2.27% | |
| Human_echovirus_30 | 2 | 1.52% | |
| Human_echovirus_6 | 11 | 8.33% | |
| Human_echovirus_7 | 36 | 27.27% | |
| TOTAL | 243 |