| Literature DB >> 35058699 |
Tong Zhao1, Dongdong Zhang1, Yiming Liu1, Mingming Feng1, Ze Xu1, Haoyue Huang1, Luoya Zhang1, Wenjie Li1, Xing Li1.
Abstract
BACKGROUND: GC (group-specific component globulin) encoding VDBP (Vitamin D binding protein) polymorphisms have been associated with susceptibility to some diseases such as diabetes, obesity, osteoporosis, and polycystic ovary syndrome, but the evidence for metabolic syndrome (MetS) in the Chinese rural population is inconclusive. Therefore, we investigated the relationship between GC variants (rs7041, rs4588, rs2282679, and rs705117) and MetS risk as well as VDBP levels in the Chinese rural population. PATIENTS AND METHODS: The participants (range of age: 20-90 years) of this case-control study were recruited from the northern Chinese Han rural population. We matched 445 MetS cases with non-MetS controls in a 1:1 ratio by sex, age (within 5 years). Real-time PCR technology was carried out by TaqMan assays to examine the four variants of rs7041, rs4588, rs2282679, and rs705117 within the GC gene. To identify the association of GC gene polymorphisms with MetS, we calculated ORs using a conditional logistic regression model adjusted for potential confounding factors.Entities:
Keywords: GC; metabolic syndrome; polymorphism; rural population
Year: 2022 PMID: 35058699 PMCID: PMC8765441 DOI: 10.2147/DMSO.S346528
Source DB: PubMed Journal: Diabetes Metab Syndr Obes ISSN: 1178-7007 Impact factor: 3.168
Information on the Selected SNPs in GC Gene
| SNPs | Allele | Position | Location | MAFa |
|---|---|---|---|---|
| rs7041 | T>G | 4:71752617 | Exon | 0.382 |
| rs4588 | C>A | 4:71752606 | Exon | 0.208 |
| rs2282679 | A>C | 4:71742666 | Intron | 0.202 |
| rs705117 | G>A | 4:71742398 | Intron | 0.422 |
Note: All SNP information from NCBI database GRCh38. p7.
Abbreviation: SNP, Single nucleotide polymorphism; aMAF, minor allele frequencies based on 1000 Genomes Project.
Anthropometric and Clinical Characteristics of Study Participants
| Characteristics | MetS (n=445) | Control (n=445) | |
|---|---|---|---|
| Male | 194(43.60%) | 194(43.60%) | 1 |
| Age (years) | 56.00(46.00–66.00) | 55.00(46.00–65.00) | 0.963 |
| Smoking | 98(22.02%) | 113(25.39%) | 0.237 |
| Drinking | 60(13.48%) | 60(13.48%) | 1 |
| Family history of diabetes | 99(22.25%) | 84(18.88%) | 0.426 |
| Family history of hyperlipidemia | 39(8.76%) | 26(5.84%) | 0.214 |
| Family history of obesity | 16(%)3.60 | 9(2.02%) | 0.306 |
| Family history of hypertension | 177(39.78%) | 156(35.06%) | 0.194 |
| BMI (kg/m2) | 27.63(25.93–29.79) | 24.30(22.09–26.59) | <0.01 |
| WC (cm) | 95.00(90.00–100.00) | 84.00(77.00–90.00) | <0.01 |
| FPG (mg/dl) | 5.44(4.57–7.17) | 4.64(4.07–5.17) | <0.01 |
| TC (mg/dl) | 4.51(3.95–5.28) | 4.43(3.90–5.13) | 0.015 |
| TG (mg/dl) | 1.97(1.36–2.68) | 1.06(0.71–1.46) | <0.01 |
| HDL-C (mg/dl) | 1.21(1.03–1.39) | 1.46(1.28–1.65) | <0.01 |
| LDL-C (mg/dl) | 2.33(1.90–3.03) | 2.49(2.04–2.99) | 0.080 |
| SBP (mm Hg) | 133.00(123.00–148.00) | 123(115.00–137.00) | <0.01 |
| DBP (mm Hg) | 85.00(80.00–92.00) | 80.00(75.00–88.00) | <0.01 |
| VDBP (μg/mL) | 136.40(103.99–284.79) | 145.97(100.88–336.99) | 0.735 |
Note: Data are displayed as medians (interquartile range) or numbers (%).
Abbreviations: BMI, body mass index; WC, waist circumference; FPG, fasting plasma glucose; TC, total cholesterol; TG, triglyceride; HDL-C, high-density lipoprotein cholesterol; LDL-C, low-density lipoprotein cholesterol; SBP, systolic blood pressure; DBP, diastolic blood pressure; VDBP, vitamin D binding protein.
Figure 1Genotypic distributions of single nucleotide polymorphisms in the GC gene among MetS patients and controls. The total number in each group is not equal to 445 because of failed genotyping for some samples. Data are presented as count numbers and percentages. (A) Frequencies of rs7041, (B) frequencies of rs4588, (C) frequencies of rs2282679, and (D) frequencies of rs705117. The P-values were generated by Pearson’s χ2 tests.
Associations of Genotypes of GC Gene and Risk of Metabolic Syndrome in Han Chinese
| SNPs | Genotypes | Adjusted ORsa | 95% CI | |
|---|---|---|---|---|
| rs7041 | TT | 1 | ||
| TG | 1.103 | 0.830–1.465 | 0.501 | |
| GG | 1.367 | 0.807–2.313 | 0.245 | |
| TG+GG/TT | 1.142 | 0.870–1.479 | 0.339 | |
| GG/TT+TG | 1.310 | 0.785–2.186 | 0.301 | |
| rs4588 | CC | 1 | ||
| CA | 0.678 | 0.505–0.910 | 0.010 | |
| AA | 0.603 | 0.373–0.973 | 0.039 | |
| CA+AA/CC | 0.663 | 0.503–0.875 | 0.004 | |
| AA/CC+CA | 0.751 | 0.478–1.178 | 0.212 | |
| rs2282679 | AA | 1 | ||
| AC | 0.683 | 0.509–0.917 | 0.011 | |
| CC | 0.668 | 0.416–1.073 | 0.095 | |
| AC+CC/AA | 0.683 | 0.519–0.897 | 0.006 | |
| CC/AA+AC | 0.774 | 0.494–1.214 | 0.264 | |
| rs705117 | GG | 1 | ||
| GA | 0.821 | 0.580–1.162 | 0.265 | |
| AA | 0.689 | 0.470–1.008 | 0.055 | |
| GA+AA/GG | 0.769 | 0.560–1.005 | 0.103 | |
| AA/GG+GA | 0.781 | 0.571–1.068 | 0.122 |
Note: aAdjusted for smoking status, drinking status, family history of diabetes, family history of hypertension, family history of hyperlipidemia, and family history of obesity.
Abbreviations: OR, odds ratio; SNP, single nucleotide polymorphism.
Figure 2Association of genotypes of SNPs (rs7041, rs4588, rs2282679, and rs705117) of GC gene and risk of metabolic syndrome components in the rural population in Henan, China. (A) The associations between GC variants and high level of TG (triglycerides); (B) The associations between GC variants and low level of HDL-C (high-density lipoprotein-cholesterol); (C) The associations between GC variants and high level of SBP (systolic blood pressure); (D) The associations between GC variants and high level of DBP (diastolic blood pressure); (E) The associations between GC variants and high level of FPG (fasting plasma glucose); (F) The associations between GC variants and high level of WC (waist circumference).
Associations Between GC Gene and Level of VDBP
| SNP | Level of VDBPa | |
|---|---|---|
| rs7041 | 0.133 | |
| TT | 140.37(101.33–345.43) | |
| TG | 134.28(100.29–268.26) | |
| GG | 158.10(109.42–378.46) | |
| rs4588 | 0.052 | |
| CC | 149.75(103.40–361.81) | |
| CA | 129.86(100.05–276.37) | |
| AA | 153.52(106.18–336.58) | |
| rs2282679 | 0.042 | |
| AA | 150.91(103.92–397.11) | |
| AC | 129.47(100.18–276.73) | |
| CC | 137.08(101.33–282.53) | |
| rs705117 | 0.145 | |
| GG | 151.50(103.94–423.85) | |
| GA | 132.14(98.81–283.09) | |
| AA | 143.09(105.56–282.53) |
Note: aThe level of VDBP was expressed as medians with a corresponding interquartile range.
Association and Risk Between the Level of VDBP and MetS
| Level of VDBPa | Control | MetS | OR (95% CI) | |||
|---|---|---|---|---|---|---|
| VDBP-L | 325(73.03%) | 338(75.96%) | 2.078 | 0.354 | 1 | |
| VDBP-M | 61(13.71%) | 47(10.56%) | 0.735(0.505–1.122) | 0.163 | ||
| VDBP-H | 59(13.26%) | 60(13.48%) | 0.983(0.661–1.464) | 0.934 |
Note: aRange for levels of VDBP were defined as follows: VDBP-L (<300μg/mL); VDBP-M (300–600μg/mL); VDBP-H (>600μg/mL).