Literature DB >> 35042788

Minimal Information about MHC Multimers (MIAMM).

Randi Vita1, Apurva Mody2, James A Overton3, Soren Buus4, Stephen T Haley5, Alessandro Sette2,6, Vamsee Mallajosyula7, Mark M Davis7,8, Dale L Long9, Richard A Willis9, Bjoern Peters2,6, John D Altman9,10.   

Abstract

With the goal of improving the reproducibility and annotatability of MHC multimer reagent data, we present the establishment of a new data standard: Minimal Information about MHC Multimers (https://miamm.lji.org/). Multimers are engineered reagents composed of a ligand and a MHC, which can be represented in a standardized format using ontology terminology. We provide an online Web site to host the details of the standard, as well as a validation tool to assist with the adoption of the standard. We hope that this publication will bring increased awareness of Minimal Information about MHC Multimers and drive acceptance, ultimately improving the quality and documentation of multimer data in the scientific literature.
Copyright © 2022 by The American Association of Immunologists, Inc.

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Year:  2022        PMID: 35042788      PMCID: PMC8830768          DOI: 10.4049/jimmunol.2100961

Source DB:  PubMed          Journal:  J Immunol        ISSN: 0022-1767            Impact factor:   5.426


  28 in total

1.  Minimum information about a microarray experiment (MIAME)-toward standards for microarray data.

Authors:  A Brazma; P Hingamp; J Quackenbush; G Sherlock; P Spellman; C Stoeckert; J Aach; W Ansorge; C A Ball; H C Causton; T Gaasterland; P Glenisson; F C Holstege; I F Kim; V Markowitz; J C Matese; H Parkinson; A Robinson; U Sarkans; S Schulze-Kremer; J Stewart; R Taylor; J Vilo; M Vingron
Journal:  Nat Genet       Date:  2001-12       Impact factor: 38.330

2.  MaHCO: an ontology of the major histocompatibility complex for immunoinformatic applications and text mining.

Authors:  David S DeLuca; Elena Beisswanger; Joachim Wermter; Peter A Horn; Udo Hahn; Rainer Blasczyk
Journal:  Bioinformatics       Date:  2009-05-07       Impact factor: 6.937

3.  The PSI-MOD community standard for representation of protein modification data.

Authors:  Luisa Montecchi-Palazzi; Ron Beavis; Pierre-Alain Binz; Robert J Chalkley; John Cottrell; David Creasy; Jim Shofstahl; Sean L Seymour; John S Garavelli
Journal:  Nat Biotechnol       Date:  2008-08       Impact factor: 54.908

4.  T cell assays and MIATA: the essential minimum for maximum impact.

Authors:  C M Britten; S Janetzki; L H Butterfield; G Ferrari; C Gouttefangeas; C Huber; M Kalos; H I Levitsky; H T Maecker; C J M Melief; J O'Donnell-Tormey; K Odunsi; L J Old; T H M Ottenhoff; C Ottensmeier; G Pawelec; M Roederer; B O Roep; P Romero; S H van der Burg; S Walter; A Hoos; M M Davis
Journal:  Immunity       Date:  2012-07-27       Impact factor: 31.745

5.  Production of soluble MHC class II proteins with covalently bound single peptides.

Authors:  H Kozono; J White; J Clements; P Marrack; J Kappler
Journal:  Nature       Date:  1994-05-12       Impact factor: 49.962

6.  The interaction of beta 2-microglobulin (beta 2m) with mouse class I major histocompatibility antigens and its ability to support peptide binding. A comparison of human and mouse beta 2m.

Authors:  L O Pedersen; A Stryhn; T L Holter; M Etzerodt; J Gerwien; M H Nissen; H C Thøgersen; S Buus
Journal:  Eur J Immunol       Date:  1995-06       Impact factor: 5.532

7.  Phenotypic analysis of antigen-specific T lymphocytes.

Authors:  J D Altman; P A Moss; P J Goulder; D H Barouch; M G McHeyzer-Williams; J I Bell; A J McMichael; M M Davis
Journal:  Science       Date:  1996-10-04       Impact factor: 47.728

8.  "MIATA"-minimal information about T cell assays.

Authors:  Sylvia Janetzki; Cedrik M Britten; Michael Kalos; Hyam I Levitsky; Holden T Maecker; Cornelius J M Melief; Lloyd J Old; Pedro Romero; Axel Hoos; Mark M Davis
Journal:  Immunity       Date:  2009-10-16       Impact factor: 31.745

9.  The Resource Identification Initiative: A Cultural Shift in Publishing.

Authors:  Anita Bandrowski; Matthew Brush; Jeffery S Grethe; Melissa A Haendel; David N Kennedy; Sean Hill; Patrick R Hof; Maryann E Martone; Maaike Pols; Serena C Tan; Nicole Washington; Elena Zudilova-Seinstra; Nicole Vasilevsky
Journal:  J Comp Neurol       Date:  2016-01-01       Impact factor: 3.215

10.  The Immune Epitope Database (IEDB): 2018 update.

Authors:  Randi Vita; Swapnil Mahajan; James A Overton; Sandeep Kumar Dhanda; Sheridan Martini; Jason R Cantrell; Daniel K Wheeler; Alessandro Sette; Bjoern Peters
Journal:  Nucleic Acids Res       Date:  2019-01-08       Impact factor: 16.971

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