Yihang Fang1,2, Fangfu Zhang1, Gabriela A Farfan2, Huifang Xu1. 1. NASA Astrobiology Institute, Department of Geoscience, University of Wisconsin-Madison, 1215 W Dayton Street, Madison, Wisconsin 53706, United States. 2. Department of Mineral Sciences, National Museum of Natural History, Smithsonian Institution, 10th St. & Constitution Ave. NW, Washington, District of Columbia 20560, United States.
Abstract
How dolomite [CaMg(CO3)2] forms is still underdetermined, despite over a century of efforts. Challenges to synthesizing dolomite at low temperatures have hindered our understanding of sedimentary dolomite formation. Unlike calcium, magnesium's high affinity toward water results in kinetic barriers from hydration shells that prevent anhydrous Ca-Mg carbonate growth. Previous synthesis studies show that adding low-dielectric-constant materials, such as dioxane, dissolved sulfide, and dissolved silica, can catalyze the formation of disordered dolomite. Also, polar hydrophilic amino acids and polysaccharides, which are very common in biomineralizing organisms, could have a positive role in stimulating Mg-rich carbonate precipitation. Here, we show that disordered dolomite and high-magnesium calcite can be precipitated at room temperature by partially replacing water with ethanol (which has a lower dielectric constant) and bypassing the hydration barrier. Increasing the ethanol volume percentage of ethanol results in higher Mg incorporation into the calcite structure. When the ethanol volume percentage increases to 75 vol %, disordered dolomite (>60 mol % MgCO3) can rapidly precipitate from a solution with [Mg2+] and [Ca2+] mimicking seawater. Thus, our results suggest that the hydration barrier is the critical kinetic inhibitor to primary dolomite precipitation. Ethanol synthesis experiments may provide insights into other materials that share similar properties to promote high-Mg calcite precipitation in sedimentary and biomineral environments.
How dolomite [CaMg(CO3)2] forms is still underdetermined, despite over a century of efforts. Challenges to synthesizing dolomite at low temperatures have hindered our understanding of sedimentary dolomite formation. Unlike calcium, magnesium's high affinity toward water results in kinetic barriers from hydration shells that prevent anhydrous Ca-Mg carbonate growth. Previous synthesis studies show that adding low-dielectric-constant materials, such as dioxane, dissolved sulfide, and dissolved silica, can catalyze the formation of disordered dolomite. Also, polar hydrophilic amino acids and polysaccharides, which are very common in biomineralizing organisms, could have a positive role in stimulating Mg-rich carbonate precipitation. Here, we show that disordered dolomite and high-magnesium calcite can be precipitated at room temperature by partially replacing water with ethanol (which has a lower dielectric constant) and bypassing the hydration barrier. Increasing the ethanol volume percentage of ethanol results in higher Mg incorporation into the calcite structure. When the ethanol volume percentage increases to 75 vol %, disordered dolomite (>60 mol % MgCO3) can rapidly precipitate from a solution with [Mg2+] and [Ca2+] mimicking seawater. Thus, our results suggest that the hydration barrier is the critical kinetic inhibitor to primary dolomite precipitation. Ethanol synthesis experiments may provide insights into other materials that share similar properties to promote high-Mg calcite precipitation in sedimentary and biomineral environments.
Dolomite [CaMg(CO3)2] is one of the most
abundant carbonates in sedimentary rocks. Although modern seawater
is supersaturated with respect to dolomite, contemporaneous precipitation
of carbonate in seawater is dominated by aragonite with only rare
dolomite occurrences. This creates a discrepancy with observations
in the geologic record where massive sedimentary dolomite deposits
have been found. This contradiction in dolomite prevalence combined
with difficulties in synthesizing dolomite or its precursor phases
(high Mg-calcite, protodolomite, and disordered dolomite) at room
temperature in the past defines the long-standing “dolomite
problem”.[1−6] In modern settings, primary dolomite is mainly reported in extreme
or uncommon environments such as alkaline lakes,[7−9] deep marine
carbonate pavements associated with methane seeps,[10−13] and shallow marine environments
with microbial mats.[14−17]Low-temperature synthesis of dolomite has been unsuccessful
for
decades, even with oversaturated solutions and prolonged experiments.[4] Although dolomite has been recognized as thermodynamically
stable in modern seawater,[18−20] low-temperature synthesis attempts
of dolomite close to seawater composition have only produced aragonite
and calcite. One of the main issues in synthesizing dolomite in aqueous
solutions is magnesium’s strong affinity for water with higher
enthalpy[21−23] and slower exchange rate[24] compared to other divalent ions. Water molecules strongly bond with
free Mg2+ in solution and inhibit Mg2+ from
incorporating into the crystal[21,25−28] or it bonds with crystal-surface Mg2+, preventing Mg2+ from bonding with CO32- and
hindering the crystal growth.[29] Consequently,
magnesium usually incorporates into hydrate mineral phases, such as
nesquehonite (MgCO3·3H2O), lansfordite
(MgCO3·5H2O), hydromagnesite [Mg5(CO3)4(OH)2·4H2O],
and dypingite [Mg5(CO3)4(OH)2·5H2O] in a Mg-bearing solution at room temperature.[30,31] Therefore, the dehydration of the Mg–water complex is considered
the most critical barrier for dolomite nucleation and growth.[21,27,32]Many successful attempts
at low-temperature disordered dolomite
precipitation have been demonstrated in the past years with the presence
of catalysts.[33−38] These catalysts, including dioxane, polysaccharides, exopolymeric
substances (EPSs), and aqueous Si(OH)4, either have low
dipole moments (silica and dioxane) or have −OH groups that
will form a hydrogen bond with CO32– on
carbonate surfaces (polysaccharide and EPS). We recognize that the
hydration problem is not the only limiting factor in inhibiting dolomite
growth in a low-temperature environment. Other factors are lattice
limitation,[32] difference in cation properties,[39] and reduced surface energy from cation disordering.[40] However, the hydration barrier is a first step
to consider prior to Mg2+ incorporation into the calcite
structure and CO32– bonding with surface
Mg2+ during (disordered) dolomite precipitation. Many previous
works have investigated the effects of ethanol–water mixtures
on the precipitation of calcite in Mg-free solutions to demonstrate
that different ethanol concentrations could change the polymorph of
CaCO3 to calcite, aragonite, or vaterite.[41,42] Seo et al.[41] suggested that increasing
ethanol volume percent over 50 vol % leads to preferential precipitation
of aragonite and vaterite, whereas lower ethanol volume percent experiments
are dominated by calcite structures. Sand et al.[42] also demonstrated a similar effect: with increasing ethanol
or propanol in solution, the amount of aragonite also increases. Yet,
few attempts have been made to synthesize carbonates in a water–alcohol
mixture with magnesium. Liu et al.,[43] using
10× seawater Mg and Ca concentrations, observed that lower ethanol
concentrations (≤33 vol %) result in a mixture of aragonite
and calcite, while higher ethanol concentrations are dominated by
pure aragonite. On the other hand, Falini et al.[44] revealed Mg-calcite with up to ∼14 mol. MgCO3 can be precipitated in different water–alcohol mixtures,
that is, methanol, ethanol, and propanol. Therefore, this study is
designed to bypass the hydration barrier of Mg2+ cations,
test the validity of water inhibition on dolomite formation, and investigate
other factors that impact dolomite nucleation.
Methods
Carbonate Terminology
To identify and characterize
the dolomite and dolomite precursor phases in our experiments, we
follow these definitions: Gregg et al.[45] describe high-magnesium calcite (HMC) as a compound containing 4–36
mol % MgCO3, Fang and Xu[46] describe
disordered dolomite as >36 mol % MgCO3 with no cation
ordering,
and protodolomite as >36 mol % MgCO3 with the evidence
of partial cation ordering (Figure ). Disordered dolomite and HMC are considered to be
precursor phases for sedimentary dolomite, where both phases have
no cation ordering and R3̅c symmetry, compared to R3̅ for stoichiometric
dolomite.[5,35,45,47] The reduced symmetry of stoichiometric dolomite results
in an extra set of reflections or “b”-reflections,
such as (105̅), (101), and (003).
Figure 1
Ca–Mg carbonate
terminology used in this work. The classification
of disordered dolomite, protodolomite, and HMC is based on previous
works.[45,46] The color scale on the left side indicates
cation ordering states.
Ca–Mg carbonate
terminology used in this work. The classification
of disordered dolomite, protodolomite, and HMC is based on previous
works.[45,46] The color scale on the left side indicates
cation ordering states.
Synthesis Experiments
We conducted closed-system free-drift
synthesis experiments in sealed polyethylene bottles. Experiments
testing the impact of ethanol content and temperature on dolomite
precipitation were conducted at 50–75 vol % ethanol and at
25, 40, and 50 °C (outlined in Table ). 50 or 100 mM MgCl2·6H2O was added to 10 mM CaCl2·H2O
and 50 mM NaHCO3 (Fisher Chemical) with distilled deionized
(DI) water. After constantly mixing for 30 min, solutions were divided
into either 5 or 10 50 mL sized bottles and kept in a Thermo Scientific
Heratherm General Protocol oven for time series analysis (24–289
h). Calcite-seeded solutions followed protocols established by previous
studies with 1 g/L of calcite seeds, which have a surface area per
calcite seed mass of 9.8 m2/g.[38] Solutions were then filtered with filter papers (GE Whatman, 20–25
μm pore size) and air-dried for X-ray diffraction (XRD), energy-dispersive
spectrometry (EDS), and transmission electron microscopy (TEM) analyses.
Saturation indices for different phases were calculated using the
PHREEQC geochemical program.[48]
Table 1
Different Ethanol Percentage Conditions
for the Ethanol–Water Mixture to Precipitate Ca–Mg Carbonatesa
Filtered and
dried powders were
filled into Kapton or glass tubes with a 1 mm inner diameter for power
XRD analysis using a Rigaku Rapid II XRD system (Mo Kα radiation,
λ = 0.7093 Å). Diffraction patterns were collected by a
2-D image-plate detector, and patterns were converted into traditional
2θ versus intensity using Rigaku 2DP software. Mineral phases
were identified using the MDI Jade 9.5 software package with the American
Mineralogist Crystal Database (AMCSD) and the PDF-4+ database from
the International Centre for Diffraction Data (ICDD). Rietveld refinements
for unit cell parameters, crystal sizes, phase fractions, and crystallinity
were done using the Bruker TOPAS program and crystal structures from
the AMCSD. Pearson VII peak functions were used for all refinements.
We used the d104 values of calcite and
dolomite structures to estimate MgCO3 percentages in Ca–Mg
carbonates based on an empirical curve.[46,49]Scanning
electron microscopy (SEM) and EDS were performed using a Hitachi S3400
instrument at the Geoscience Department of University of Wisconsin–Madison.
EDS results were calibrated using a dolomite standard (Delight dolomite)
with 50.48 mol % MgCO3.[34,38,46] Samples were coated using 10 nm thick carbon. TEM
measurements were carried out using a Philips CM200UT TEM instrument
operating at 200 kV acceleration voltage with a 0.5 mm spherical aberration
(Cs) and a point resolution of 0.19 nm in the Material Science and
Engineering Department at the University of Wisconsin–Madison.
Results
Ethanol–Water Mixtures without Calcite Seeds
Solutions changed from transparent to opaque in all experiments within
20 min after mixing, indicating rapid precipitation. Significant increases
in pH, from 7.4–7.7 to 8.3–8.7, were observed in all
experiments, presumably from the precipitation of carbonates equilibrating
with CO2 in the bottle headspace (Table ). XRD patterns of synthesis experiments
confirmed that ethanol can induce precipitation of HMC and disordered
dolomite (Figure and Table ). XRD patterns of
typical samples displayed no obvious ordering reflection, or “b”-reflection, in the synthesized samples which would
indicate the presence of an ordered dolomite phase. The systematic
shifts of peaks in the XRD patterns toward higher angles resulted
from decreasing lattice parameters of the precipitated Ca–Mg
carbonate from increasing Mg incorporation (Figure ). With an initial Mg/Ca ratio of 5:1 solution
with 50 vol % ethanol and no calcite seeds at 50 °C, the d104 value of disordered dolomite was 2.9395
Å, corresponding to 45.3 mol % MgCO3 based on the
empirical curve for disordered dolomite.[46,49] On the other hand, control experiments containing no ethanol only
produced HMC with 2–6 mol % of MgCO3 (Table ). With the increasing ethanol
percentage, the MgCO3 content in disordered dolomite increased
from 45.3 mol.% to 51.7, 56.6, and 57.2 mol % MgCO3 precipitated
from solutions with 50, 60, and 70 vol.% to 75 vol % ethanol with
50 mM [Mg2+] at 50 °C, respectively (Figure and Table ). However, the Mg percentage in carbonate
precipitates from ethanol solutions with 100 mM [Mg2+]
appeared to be independent to increasing ethanol concentrations, with
mol % MgCO3 ranging from 50.39 to 55.31 mol % (Table ).
Figure 2
XRD patterns (Mo K-alpha
radiation) of typical samples from solutions
without calcite seeds in different volume percentages of ethanol at
50 °C and 50 mM [Mg2+]. A systematic shift in the
disordered dolomite (104) peak toward a higher angle as a function
of higher ethanol percentages reflects decreasing unit cell parameters
due to the increased incorporation of magnesium in these carbonates.
50 vol % = S5, 60 vol % = S15, 70 vol % = S25, and 75 vol % = S35.
Blue dashed line = calcite reference (104) peak position. Red dashed
line = stoichiometric dolomite reference (104) peak position. Bottom
are dolomite, calcite, and aragonite reference peaks.
Table 2
Solution Conditions for the Ethanol–Water
Mixture with Different Alkalinities to Precipitate Ca–Mg Carbonatese
sample #
volume ratioa
Mg/Ca ratio
T (°C)
calcite seeds
mineral
phases present
d104 (Å) of Ca–Mg carbonates
MgCO3 content
based on XRD (mol %)b
S56
3:3
5:1
25
N
Dol, Arg
2.9529
41.1 ± 2
S57
3:4
5:1
25
N
Dol, Arg
2.9451
43.5 ± 2
S58
3:5
5:1
25
N
Dol, Arg, Mhc
2.9367
46.1 ± 2
S59
3:4
5:1
25
Y
Dol, Cal, Arg*
2.9326
47.4 ± 2
S60
3:5
5:1
25
Y
Dol, Cal
2.9241
49.9 ± 2
S61
3:6
5:1
25
Y
Dol, Cal
2.9157
52.5 ± 2
S62
3:4
5:1
50
Y
Dol, Cal
2.8871
60.8 ± 2
S63
3:5
5:1
50
Y
Dol, Cal
2.8830
62.0 ± 2
S64
3:6
5:1
50
Y
Dol, Cal
2.8750
64.3 ± 2
S65
3:4
10:1
25
N
Dol
2.9307
47.9 ± 2
S66
3:5
10:1
25
N
Dol
2.9280
48.8 ± 2
S67
3:4
10:1
25
Y
Dol, Cal, Arg*
2.9282
48.7 ± 2
S68
3:5
10:1
25
Y
Dol, Cal
2.9158
52.4 ± 2
S69
3:6
10:1
25
Y
Dol, Cal
2.9111
53.8 ± 2
S70
3:4
10:1
50
Y
Dol, Cal
2.8792
63.1 ± 2
S71
3:5
10:1
50
Y
Dol, Cal
2.8711
65.4 ± 2
66.6 ± 2
S72
3:6
10:1
50
Y
Dol, Cal
2.8667
69.6%c (64.4% ∼ 74.2%)d
Volume ratio of MgCl2 + CaCl2 + ethanol solution
to NaHCO3 + ethanol
solution.
Molar content
of MgCO3 based on the Zhang et al. (2010) and Fang and
Xu (2019) curve.
Average
MgCO3 content
based on TEM EDS data.
MgCO3 content variation
based on TEM EDS data.
Dol
= Disordered dolomite, Cal =
Calcite, Arg = aragonite, Mhc = monohydrocalcite, and * = trace amount.
XRD patterns (Mo K-alpha
radiation) of typical samples from solutions
without calcite seeds in different volume percentages of ethanol at
50 °C and 50 mM [Mg2+]. A systematic shift in the
disordered dolomite (104) peak toward a higher angle as a function
of higher ethanol percentages reflects decreasing unit cell parameters
due to the increased incorporation of magnesium in these carbonates.
50 vol % = S5, 60 vol % = S15, 70 vol % = S25, and 75 vol % = S35.
Blue dashed line = calcite reference (104) peak position. Red dashed
line = stoichiometric dolomite reference (104) peak position. Bottom
are dolomite, calcite, and aragonite reference peaks.Volume ratio of MgCl2 + CaCl2 + ethanol solution
to NaHCO3 + ethanol
solution.Molar content
of MgCO3 based on the Zhang et al. (2010) and Fang and
Xu (2019) curve.Average
MgCO3 content
based on TEM EDS data.MgCO3 content variation
based on TEM EDS data.Dol
= Disordered dolomite, Cal =
Calcite, Arg = aragonite, Mhc = monohydrocalcite, and * = trace amount.Moreover, the MgCO3 content in precipitates consistently
shifted toward higher values with increasing temperature (25 vs 50
°C) for precipitates formed with 50 vol % ethanol and 50 mM [Mg2+] (Table ). The temperature effect is even more pronounced in the precipitates
from higher-ethanol-percentage solutions (Table ).
Ethanol–Water Mixtures with Calcite
Seeds
The
seeded effect, where seed crystals provide a crystal template allowing
for faster crystal growth, is clear in all seeded synthesis experiments.
Experiments with calcite seeds showed decreasing mol % MgCO3 with increasing ethanol percentage (Figure ). For example, precipitates from 50 vol
% ethanol with 50 mM [Mg2+] at 25 °C had a 53.7–54.8
mol % MgCO3 compared to 50.7–52.4 mol % MgCO3 from 75 vol % ethanol with 50 mM [Mg2+] (Figure ). This trend is
also observed at 50 °C, such that carbonates precipitated at
50 vol % ethanol with 50 mM [Mg2+] have 64.3–66.6
mol % MgCO3 content versus 53.8 mol % MgCO3 content
from solution with 75 vol % ethanol with 50 mM [Mg2+] (Figure ).
Figure 3
XRD patterns of typical
samples from solutions with calcite seeds
under different conditions. Experiments performed at (a) 50 °C
and 100 mM [Mg2+] with 50 vol % ethanol; (b) 50 °C
and 50 mM [Mg2+] with 50 vol % ethanol; (c) 75 °C
and 50 mM [Mg2+] with 75 vol % ethanol; (d) 25 °C
and 100 mM [Mg2+] with 50 vol % ethanol; and (e) 25 °C
and 50 mM [Mg2+] with 50 vol % ethanol. a = S72, b = S64,
c = S63, d = S69, and e = S61. Blue dashed line = calcite reference
(104) peak position. Red dashed line = stoichiometric dolomite reference
(104) peak position. Bottom are dolomite, calcite, and aragonite reference
peaks.
Figure 4
XRD Rietveld refinement results for experiments
with 50 mM [Mg2+] at 25 °C as (A) d104 values
and (B) MgCO3 mol % as a function of ethanol vol %. Red
circles correspond to seedless experiments, and blue squares correspond
to seeded experiments. Errors associated with the y-axes are ±0.004 Å (A) and ±2 mol % (B).
Figure 5
XRD Rietveld refinement results for experiments with 50 mM [Mg2+] at 50 °C as (A) d104 value
and (B) MgCO3 mol % as a function of ethanol vol %. Red
circles correspond to seedless experiments, and blue squares correspond
to seeded experiments. Errors associated with the y-axes are ±0.004 Å (A) and ±2 mol % (B).
XRD patterns of typical
samples from solutions with calcite seeds
under different conditions. Experiments performed at (a) 50 °C
and 100 mM [Mg2+] with 50 vol % ethanol; (b) 50 °C
and 50 mM [Mg2+] with 50 vol % ethanol; (c) 75 °C
and 50 mM [Mg2+] with 75 vol % ethanol; (d) 25 °C
and 100 mM [Mg2+] with 50 vol % ethanol; and (e) 25 °C
and 50 mM [Mg2+] with 50 vol % ethanol. a = S72, b = S64,
c = S63, d = S69, and e = S61. Blue dashed line = calcite reference
(104) peak position. Red dashed line = stoichiometric dolomite reference
(104) peak position. Bottom are dolomite, calcite, and aragonite reference
peaks.XRD Rietveld refinement results for experiments
with 50 mM [Mg2+] at 25 °C as (A) d104 values
and (B) MgCO3 mol % as a function of ethanol vol %. Red
circles correspond to seedless experiments, and blue squares correspond
to seeded experiments. Errors associated with the y-axes are ±0.004 Å (A) and ±2 mol % (B).XRD Rietveld refinement results for experiments with 50 mM [Mg2+] at 50 °C as (A) d104 value
and (B) MgCO3 mol % as a function of ethanol vol %. Red
circles correspond to seedless experiments, and blue squares correspond
to seeded experiments. Errors associated with the y-axes are ±0.004 Å (A) and ±2 mol % (B).The MgCO3 content in seeded experiments was significantly
higher compared to that in seedless experiments (Figures and 5 and Tables and 2). This effect is most pronounced in the 50 mM Mg
solutions. For example, precipitates from seeded experiments with
a 5:1 Mg/Ca ratio, 25 °C, and 50 vol % ethanol have 47.4–49.9
mol % MgCO3 compared to 43.5–46.1 mol % MgCO3 in parallel unseeded experiments. The differences in Mg incorporation
between seedless and seeded experiments diminish at 50 °C, compared
to those at 25 °C.In contrast to our seedless ethanol
experiments, the dominant product
in our ethanol-free control experiments was aragonite rather than
Mg-rich calcium carbonates (Table ). Aragonite is absent in all calcite-seeded experiments
with ethanol. In calcite-seeded experiments, aragonite is absent with
only calcite in the ethanol-free controls. In all synthesized samples,
diffraction patterns show humps at low angles, indicating the presence
of nanosized particles. No obvious amorphous calcium carbonate (ACC)
and amorphous calcium magnesium carbonate (ACMC) have been observed
in XRD patterns around 3.1 Å based on the results from Xu et
al. The seeded experiments consistently show a lower final pH than
the seedless experiments under the same conditions.Other than
disordered dolomite and HMC, two metastable phases nesquehonite
[Mg(HCO3) (OH)·H2O] and hydromagnesite
[Mg5(CO3)4(OH)2·4H2O] may also form. Nesquehonite and hydromagnesite are found
in all 50 °C experiments but only in several cases at 25 °C.
At 50 °C, nesquehonite will dehydrate and transform into hydromagnesite
after ∼60 h. A recent study has shown that solution with a
high concentration of Ca, Mg, and carbonate and high pH can result
in the formation of ACMC which later transforms into nesquehonite,
monohydrocalcite, and disordered dolomite.[51] The cause of the dehydration of these hydrate Mg-carbonate phases
is not clear and is beyond the purpose of this study.
Scanning Electron
Microscopy
SEM images showed that
spherulite-shaped disordered dolomite overgrew Mg-calcite in ethanol
solutions with no calcite seeds (Figure A). However, disordered dolomite that precipitated
from ethanol solutions with calcite seeds grew into irregular shapes,
indicating that calcite seeds likely provide heterogeneous nucleation
sites for Mg-bearing carbonate growth (Figure B).
Figure 6
Backscattered electron (BSE; A&B) and secondary
electron (SE;
C&D) images of synthesized disordered dolomite from 50 vol % ethanol
solutions with [Mg2+] = 50 mM and [Ca2+] = 10
mM. Dolomite morphologies formed (A–C) as spherulites without
calcite seeds at 25 °C vs (D) as subhedral shapes overgrown on
calcite seeds at 50 °C. The inset in lower right in (D) is original
calcite chalk (seeds). EDS spectrum from (D) is from disordered dolomite
and calcite seed.
Backscattered electron (BSE; A&B) and secondary
electron (SE;
C&D) images of synthesized disordered dolomite from 50 vol % ethanol
solutions with [Mg2+] = 50 mM and [Ca2+] = 10
mM. Dolomite morphologies formed (A–C) as spherulites without
calcite seeds at 25 °C vs (D) as subhedral shapes overgrown on
calcite seeds at 50 °C. The inset in lower right in (D) is original
calcite chalk (seeds). EDS spectrum from (D) is from disordered dolomite
and calcite seed.
Transmission Electron Microscopy
TEM analyses showed
that disordered dolomite overgrew and surrounded calcite in seeded
experiments (Figure ). TEM also revealed that dolomite formed in ethanol solutions as
nanocrystals (∼10 nm) with well-developed crystal {104} faces
(Figure ). We note
that these nanocrystals were not randomly oriented but followed a
similar orientation with low-angle boundaries (Figure C). Low-angle boundaries were also observed
in selected-area electron diffraction (SAED) as diffraction arcs of
about ∼10°, instead of distinctive spots seen from a single-crystal
region or complete rings as seen from random crystal orientations
(Figure D). The absence
of super-lattice “b”-reflections [e.g.,
(105̅), (101), and (003)] in both SAED and fast Fourier transform
from high-resolution TEM (HRTEM) images indicates that these precipitated
Ca–Mg carbonates have a calcite structure with a completed
disordered cation or s* = 0 following the notation
for the cation ordering state from Fang and Xu.[46]
Figure 7
TEM images of synthetic disordered dolomite from 50 vol % ethanol
with calcite seeds at 25 °C (A&B) and 50 °C (C). (B)
HRTEM image and fast Fourier transform show only the “a”-reflection. (D) SAED of disordered dolomite on
calcite seed in (C). Red miller indices for calcite seed and yellow
for disordered dolomite. Dol = disordered dolomite and Cal = calcite.
TEM images of synthetic disordered dolomite from 50 vol % ethanol
with calcite seeds at 25 °C (A&B) and 50 °C (C). (B)
HRTEM image and fast Fourier transform show only the “a”-reflection. (D) SAED of disordered dolomite on
calcite seed in (C). Red miller indices for calcite seed and yellow
for disordered dolomite. Dol = disordered dolomite and Cal = calcite.TEM confirmed that smaller crystals in seeded experiments
are about
∼100 nm in size, which is consistent with Rietveld refinement
results (Figure ).
TEM images did not show convincing evidence of the presence of oriented
attachment. HRTEM images and SAED revealed the presence of heterogeneous
nucleation of disordered dolomite on calcite (Figure ). Based on SAED, overgrown disordered dolomite
showed a 60° rotation parallel to a-axis intergrowth
with the underlain calcite seed (Figures and 8).
Figure 8
Atomic model
of disordered dolomite intergrowth with calcite parallel
to the a-axis with a 60° rotation. (A) Ball
and stick model with calcite on the bottom and disordered dolomite
on top. Blue = calcium, orange = magnesium, brown = carbon, and red
= oxygen. (B) {104} forms of disordered dolomite and calcite with
the same orientation as (A).
Atomic model
of disordered dolomite intergrowth with calcite parallel
to the a-axis with a 60° rotation. (A) Ball
and stick model with calcite on the bottom and disordered dolomite
on top. Blue = calcium, orange = magnesium, brown = carbon, and red
= oxygen. (B) {104} forms of disordered dolomite and calcite with
the same orientation as (A).
Discussion
Homogeneous Nucleation in Seedless Experiments from Solutions
with Lower Dielectric Constants
We were able to successfully
precipitate dolomite precursor phases (HMC and disordered dolomite)
in the laboratory at low temperatures using ethanol to remove the
hydration barrier around Mg2+ that historically has inhibited
dolomite precipitation in otherwise dolomite-saturated and thermodynamically
favorable conditions.[21,23,25−28] XRD results confirmed the precipitation of disordered dolomite and
HMC in our ethanol-added experiments without calcite seeds. Rather
than producing perfect dolomite crystals, Ca–Mg carbonates
from low-temperature precipitation formed disordered dolomite,[40] likely due to insufficient thermal energy needed
to rearrange cations within the crystals. This was evidenced by the
absence of b-reflections or ordering in cations consistent
with other low-temperature Ca–Mg carbonate syntheses[33−38] and computational simulations.[40] For
lower-ethanol-concentration experiments, disordered dolomite possessed
larger d104 values, up to 2.9360 Å,
than stoichiometric dolomite (∼2.8978 Å), indicating excess
Ca incorporation and disorder in cation sites still partially inhibited
by the hydration barrier. In contrast, higher-ethanol experiments
showed values close to ideal d104 values
(∼2.8978 Å) corresponding to MgCO3 mol % of
44 to ∼63%. This indicated that with a much dampened hydration
barrier, disordered dolomite could be synthesized from 50 °C
to room temperature. Previous work shows a significantly lower Mg
incorporation[44] compared to our results
which might be the effect of the slow diffusion of ammonium carbonate
in their study compared to the predissolved sodium bicarbonate used
in this study.Our data suggest that the ability to promote
dehydration, homogeneous nucleation, and Mg incorporation into carbonates
from increasing the ethanol content in solutions may stem from the
lower dielectric constant of ethanol compared to that of water. Homogeneous
nucleation in this study follows the classical nucleation theory that
precipitates nucleate in bulk solution and not on substrate surfaces,
which did not exclude the formation of amorphous and transient crystalline
phases.[52] Using the Born equation (eq ),[53] we see a clear relationship between the dielectric constant, solvation
energy (hydrogen bond and van der Waals bond energies), dehydration
(or hydration energy defined as the solvation energy of a solute bonding
with water), and Gibbs free energy.where NA is the
Avogadro’s constant, z is the charge of the
ion, e is the elementary charge, ε0 is the permittivity of free space, r0 is the effective radius of the ion, and ε is the relative permittivity or dielectric constant. Since
our synthesis experiments were conducted under similar conditions
and the only variable that changed was ε, we can simplify eq toThis implies
that a larger dielectric constant corresponds to a
larger solvation energy or dehydration energy. Also solvation energies
of cations () can be calculated based on the Born equation[54]where ωM is the Born solvation coefficient. In the context for
this study, the equation will becomeWater has a significantly larger dielectric constant (80.10
at
20 °C) than ethanol[55] (25.10 at 20
°C), and this difference has been used in the past to create
experiments with linearly increasing dielectric constants via water–ethanol
mixtures.[56] In our case, dielectric constants
of 50 to 75 vol % ethanol solutions decreased from 52.60 to 38.85
at 25 °C. In the meantime, the solvation energy of Mg2+ changes from −145.84 (kcal/mol) in pure water to −144.87
(kcal/mol) in 50 vol % ethanol solutions to −143.88 (kcal/mol)
in 75 vol % ethanol solutions. The decrease in the dielectric constant
and solvation energy displayed a linear correlation with mol % MgCO3 in the carbonate precipitates (Figure ). This strong linear relationship suggests
that Mg incorporation in carbonates may be partially controlled by
the dielectric constant of the bulk solution and a lower dehydration
energy barrier. Previous molecular dynamic (MD) calculation on the
catalytic effect of polysaccharides on promoting the Mg–water
complex dehydration and disordered dolomite growth demonstrated that
a 0.7–1.1 kcal/mol reduction in energy barrier solvation energy
is sufficient (Shen et al., 2015). Therefore, the ∼1–2
kcal/mol decrease in solvation energy between ethanol-free solution
and 50 vol % ethanol–water mixture and 75 vol % ethanol–water
mixture from the decreasing dielectric constant in this study is adequate
for disordered dolomite formation. The dehydration energy of calcium
will also be affected by the decreased dielectric constant in the
solvent. On the other hand, a significantly slower water-exchange
rate of Mg2+ compared to that of Ca2+ resulted
in a more stable hydration shell around Mg2+.[32] Increasing ethanol percentage in the solvent
might also enhance the Mg2+–solvent exchange and
thereafter reduce the stability of the Mg–water complex. Future
MD calculations will be needed to understand the exact water change
rate increase with increased ethanol and other solvents. The disruption
of the Mg–water complex from ethanol also resulted in the decreasing
amount of hydromagnesite with increasing ethanol percentage. Nevertheless,
Ca is likely to be coordinated more with anions than the solvent as
a dissociated ion pair in a lower dielectric constant system based
on calcium oxalate experiments.[57] These
cation–anion ion pairs in the low-dielectric-constant solvent
suggest another potential mechanism for the disruption of the Mg hydration
shell in the ethanol solution. It is to be recognized that ethanol
has a lower solubility for calcium and magnesium compared to solvents
such as water. By replacing a significant portion of water with ethanol,
the relative saturation state will increase. Gomaa[58] shows that the calcite solubility product decreases by
1 log unit with every ∼25 mol % increase of ethanol solution.
However, increases in the saturation state along could not drive the
formation of Ca–Mg carbonate, which has been demonstrated by
Land.[4] A recent work demonstrated that
magnesite could precipitate under low water activity but not in the
bulk solution.[59] Theoretical calculation
using MD and metadynamics (MetaD) revealed that certain anions and
solvent molecules could facilitate the dehydration of the Mg2+–water complex and foster precipitation of high Mg–carbonate
phases.[60] Our experimental data support
this calculation result with ethanol affecting the Mg hydration shell
and enhance the dehydration of the Mg2+–water complex.
Previous studies observed a precipitation shift toward aragonite at
a higher ethanol percentage[41,42] which could be a result
of faster precipitation as the dehydration energy of calcium decreased.
Future studies should investigate this relationship in more detail.
Figure 9
Dielectric
constant of the water–ethanol mixture (left)
and solvation energy of Mg (right) vs mol % MgCO3 in the
precipitated carbonates from seedless experiments. Linear fit for
the dielectric constant: y = −0.56x + 76.34 and R2 = 0.99.
Dielectric
constant of the water–ethanol mixture (left)
and solvation energy of Mg (right) vs mol % MgCO3 in the
precipitated carbonates from seedless experiments. Linear fit for
the dielectric constant: y = −0.56x + 76.34 and R2 = 0.99.
Heterogeneous Nucleation in Calcite-Seeded
Experiments Enhanced
by Adsorbed Ethanol Layers
Calcite-seeded experiments show
a different pattern for Mg-rich calcium carbonate formation controlled
by heterogeneous nucleation. Heterogeneous nucleation of Ca–Mg
carbonate on calcite surfaces minimizes the overall energy by reducing
the energy-unfavorable solution–crystal interface.[61] The MgCO3 content in precipitated
carbonate shows a decreasing trend with increasing ethanol volume
percentage, opposite to unseeded experiments (Figures and 5). We suggest
that this is because the calcite seeds take up Mg2+ at
the early stages of dolomite formation, reducing the available Mg
in the solution for the new dolomite precipitates to incorporate as
they grow. Thus, d104 values for the calcite
seeds and the precipitated dolomite become more similar over time
as the dolomite becomes less Mg-rich (Figure ).Calcite surfaces provide heterogeneous
nucleation sites in these ethanol–water mixtures that are different
compared to simple calcite–water interfaces. Atomic force microscopy
and MD simulation studies showed that ethanol layers will preferentially
adsorb onto calcite {104} surfaces.[62−65] The adsorbed ethanol will form
a ∼6 Å ordered layer and a thicker disordered layer with
a gap separating the two ethanol layers.[64] This adsorbed layer creates a hydrophobic layer with −CH3 ends pointing away from the crystal surface.[65−67] These surface-adsorbed layers of alcohol (ethanol, methanol, isopropanol,
pentanol, or octanoic acid) bond more strongly with the calcite surface
than with water[62,63,68] and inhibit the cation-exchange rate at crystal surfaces to reduce
precipitation and dissolution rates for calcite.[65] Inhibition effects from ethanol layers may also lead to
decreasing particle sizes with increasing ethanol volume percent.[41] In contrast, ordered surface ethanol layers
disrupted at calcite surface steps allow for faster cation exchange,
resulting in faster crystal precipitation and dissolution.[65] Because disordered dolomite and HMC precipitated
in this study are in the nanometer scale with a high density of step
edges, the inhibition effect from surface ethanol layers is likely
reduced in our synthesis.We propose that hydrophobic ethanol
layers adsorbed on carbonate
surfaces further assisted the dehydration of the Mg–water complex
and promoted Mg incorporation. Although previous works have suggested
that surface-stable ethanol layers would decelerate calcite growth,[65,68] the hydrophobic ends of the ethanol layer could replace surface
water, which would increase the chance for carbonate groups to bond
with surface Mg. The calcite seeds in the ethanol–water mixture
experiments also further inhibited the formation of aragonite in a
Mg-rich solution. This shift in mineralogy compared to the control
experiments and seedless experiments points to the surface hydrophobic
layer enhancing heterogeneous nucleation on calcite surfaces, supplementing
the homogeneous nucleation from the reduced dielectric constant of
ethanol.Increased alkalinity in the solutions also had a pronounced
effect
on promoting Mg incorporation into the calcite structure (Table ). A higher alkalinity
offers higher likelihood for CO32- groups
to bond with crystal-surface Mg2+. Previous works have
also noted an increasing dolomitization rate with higher alkalinity
in all experiments.[69−71]Lattice mismatches with the calcite seeds from
a 60° overgrowth
rotation, compositional variations, and disordering in cations may
have caused thermodynamic instability and inhibited the disordered
dolomite crystals from growing into larger crystals. The small size
of disordered dolomite crystals was similar to other successful room-temperature
synthesis attempts,[34−38,72] and our spherulitic- or irregular-shaped
crystal morphologies were similar to other high-ethanol volume % calcite
synthesis studies.[41,42] To explain the subhedral dolomite
crystals formed in lower-ethanol solutions (30–50 vol %), we
propose that the increased availability of water to bond with Mg in
low-ethanol solutions could have further inhibited the crystal growth
size and led to subhedral crystal shapes. This effect is most noticeable
in calcite-seeded experiments (Figure ). The lower pH in seeded experiments compared to that
in seedless experiments is likely due to the increased amount of carbonate
from heterogeneous nucleation and changing equilibrium with the additional
calcite.
Implication for Ca–Mg Carbonates in Biomineral Systems
Here, we use ethanol as a low-dielectric-constant compound to pave
the way for Mg2+ to bond with carbonate. Although ethanol
is hydrophilic, its polarity and amphipathic nature resulted in a
water-repelling hydrophobic layer on the carbonate surface, promoting
Mg incorporation. We suggest that this relationship may be an analogue
for biomineralization by protein and polysaccharide catalysts that
similarly are polar hydrophilic and more importantly amphipathic can
create a hydrophobic layer on carbonate surfaces. For example, scleractinian
coral CARP3 proteins and soft-bodied coral sclerite-forming proteins,
known to help induce Mg-rich calcite formation, are composed of approximately
50% “very hydrophilic” amino acids and less than 10%
“very hydrophobic” amino acids.[73−75] HMC is also
formed on the exoskeletons of leaf-cutter ants, which are also abundant
in chitin and polar hydrophilic and amphipathic amino acids.[76] HMC and disordered dolomite precipitated by
crustose coralline algae are likely induced by polysaccharides which
are polar, hydrophilic, and amphipathic such as carrageenan.[77−80]
Conclusions
Disordered dolomite and high Mg-calcite
can directly precipitate
through homogeneous nucleation at room temperature by lowering the
dielectric constant of the solution, with a linear relationship between
a decreasing solution dielectric constant and increasing Mg incorporation.
In scenarios of heterogeneous nucleation on calcite seeds, adsorbed
hydrophobic surface layers help to further promote Mg incorporation
in Mg-rich calcium carbonate precipitates. Although high-ethanol-percentage
solutions do not exist in natural environments, this work provides
a detailed understanding of the formation of Ca–Mg carbonates
and Mg incorporation into carbonates by testing the chemical properties
at play (ex: dielectric constant, alkalinity, polarity, and hydrophobicity).
The hydrophobic effect of surface ethanol layers and the polarity
of ethanol also provide a possible mechanism for Ca–Mg carbonate
precipitation in biomineralizing organisms. For instance, polysaccharides
such as carrageenans and amino acids such as aspartic acids and glutamic
acids could be responsible for precipitating Mg-rich carbonates.
Authors: I S Pasarín; M Yang; N Bovet; M Glyvradal; M M Nielsen; J Bohr; R Feidenhans'l; S L S Stipp Journal: Langmuir Date: 2012-01-19 Impact factor: 3.882
Authors: Jie Xu; Chao Yan; Fangfu Zhang; Hiromi Konishi; Huifang Xu; H Henry Teng Journal: Proc Natl Acad Sci U S A Date: 2013-10-14 Impact factor: 11.205