Literature DB >> 35016077

Head and neck tumor segmentation in PET/CT: The HECKTOR challenge.

Valentin Oreiller1, Vincent Andrearczyk2, Mario Jreige3, Sarah Boughdad3, Hesham Elhalawani4, Joel Castelli5, Martin Vallières6, Simeng Zhu7, Juanying Xie8, Ying Peng8, Andrei Iantsen9, Mathieu Hatt9, Yading Yuan10, Jun Ma11, Xiaoping Yang12, Chinmay Rao13, Suraj Pai13, Kanchan Ghimire14, Xue Feng15, Mohamed A Naser16, Clifton D Fuller16, Fereshteh Yousefirizi17, Arman Rahmim17, Huai Chen18, Lisheng Wang18, John O Prior3, Adrien Depeursinge19.   

Abstract

This paper relates the post-analysis of the first edition of the HEad and neCK TumOR (HECKTOR) challenge. This challenge was held as a satellite event of the 23rd International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI) 2020, and was the first of its kind focusing on lesion segmentation in combined FDG-PET and CT image modalities. The challenge's task is the automatic segmentation of the Gross Tumor Volume (GTV) of Head and Neck (H&N) oropharyngeal primary tumors in FDG-PET/CT images. To this end, the participants were given a training set of 201 cases from four different centers and their methods were tested on a held-out set of 53 cases from a fifth center. The methods were ranked according to the Dice Score Coefficient (DSC) averaged across all test cases. An additional inter-observer agreement study was organized to assess the difficulty of the task from a human perspective. 64 teams registered to the challenge, among which 10 provided a paper detailing their approach. The best method obtained an average DSC of 0.7591, showing a large improvement over our proposed baseline method and the inter-observer agreement, associated with DSCs of 0.6610 and 0.61, respectively. The automatic methods proved to successfully leverage the wealth of metabolic and structural properties of combined PET and CT modalities, significantly outperforming human inter-observer agreement level, semi-automatic thresholding based on PET images as well as other single modality-based methods. This promising performance is one step forward towards large-scale radiomics studies in H&N cancer, obviating the need for error-prone and time-consuming manual delineation of GTVs.
Copyright © 2021. Published by Elsevier B.V.

Entities:  

Keywords:  Automatic segmentation; Challenge; Head and neck cancer; Medical imaging; Oropharynx

Mesh:

Substances:

Year:  2021        PMID: 35016077     DOI: 10.1016/j.media.2021.102336

Source DB:  PubMed          Journal:  Med Image Anal        ISSN: 1361-8415            Impact factor:   8.545


  7 in total

Review 1.  Artificial Intelligence for Radiation Oncology Applications Using Public Datasets.

Authors:  Kareem A Wahid; Enrico Glerean; Jaakko Sahlsten; Joel Jaskari; Kimmo Kaski; Mohamed A Naser; Renjie He; Abdallah S R Mohamed; Clifton D Fuller
Journal:  Semin Radiat Oncol       Date:  2022-10       Impact factor: 5.421

2.  Head and Neck Cancer Primary Tumor Auto Segmentation Using Model Ensembling of Deep Learning in PET/CT Images.

Authors:  Mohamed A Naser; Kareem A Wahid; Lisanne V van Dijk; Renjie He; Moamen Abobakr Abdelaal; Cem Dede; Abdallah S R Mohamed; Clifton D Fuller
Journal:  Head Neck Tumor Segm Chall (2021)       Date:  2022-03-13

3.  Combining Tumor Segmentation Masks with PET/CT Images and Clinical Data in a Deep Learning Framework for Improved Prognostic Prediction in Head and Neck Squamous Cell Carcinoma.

Authors:  Kareem A Wahid; Renjie He; Cem Dede; Abdallah S R Mohamed; Moamen Abobakr Abdelaal; Lisanne V van Dijk; Clifton D Fuller; Mohamed A Naser
Journal:  Head Neck Tumor Segm Chall (2021)       Date:  2022-03-13

4.  Progression Free Survival Prediction for Head and Neck Cancer Using Deep Learning Based on Clinical and PET/CT Imaging Data.

Authors:  Mohamed A Naser; Kareem A Wahid; Abdallah S R Mohamed; Moamen Abobakr Abdelaal; Renjie He; Cem Dede; Lisanne V van Dijk; Clifton D Fuller
Journal:  Head Neck Tumor Segm Chall (2021)       Date:  2022-03-13

5.  Challenges and chances for deep-learning based target and organ at risk segmentation in radiotherapy of head and neck cancer.

Authors:  Jasper Nijkamp
Journal:  Phys Imaging Radiat Oncol       Date:  2022-08-11

6.  Strategies for tackling the class imbalance problem of oropharyngeal primary tumor segmentation on magnetic resonance imaging.

Authors:  Roque Rodríguez Outeiral; Paula Bos; Hedda J van der Hulst; Abrahim Al-Mamgani; Bas Jasperse; Rita Simões; Uulke A van der Heide
Journal:  Phys Imaging Radiat Oncol       Date:  2022-08-13

7.  A whole-body FDG-PET/CT Dataset with manually annotated Tumor Lesions.

Authors:  Sergios Gatidis; Tobias Hepp; Marcel Früh; Christian La Fougère; Konstantin Nikolaou; Christina Pfannenberg; Bernhard Schölkopf; Thomas Küstner; Clemens Cyran; Daniel Rubin
Journal:  Sci Data       Date:  2022-10-04       Impact factor: 8.501

  7 in total

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