Literature DB >> 35013028

Mannose-binding analysis and biological application of pradimicins.

Yu Nakagawa1,2, Yukishige Ito2,3.   

Abstract

Pradimicins (PRMs) are an exceptional family of natural products that specifically bind d-mannose (Man). In the past decade, their scientific significance has increased greatly, with the emergence of biological roles of Man-containing glycans. However, research into the use of PRMs has been severely limited by their inherent tendency to form water-insoluble aggregates. Recently, we have established a derivatization strategy to suppress PRM aggregation, providing an opportunity for practical application of PRMs in glycobiological research. This article first outlines the challenges in studying Man-binding mechanisms and structural modifications of PRMs, and then describes our approach to address them. We also present our recent attempts toward the development of PRM-based research tools.

Entities:  

Keywords:  antibiotic; carbohydrate recognition; lectin mimic; molecular interaction; natural product; solid-state NMR

Mesh:

Substances:

Year:  2022        PMID: 35013028      PMCID: PMC8795531          DOI: 10.2183/pjab.98.002

Source DB:  PubMed          Journal:  Proc Jpn Acad Ser B Phys Biol Sci        ISSN: 0386-2208            Impact factor:   3.493


  45 in total

1.  Investigation of different combinations of derivatization, separation methods and electrospray ionization mass spectrometry for standard oligosaccharides and glycans from ovalbumin.

Authors:  J A Saba; X Shen; J C Jamieson; H Perreault
Journal:  J Mass Spectrom       Date:  2001-05       Impact factor: 1.982

2.  Spectroscopic studies on the interaction of pradimicin BMY-28864 with mannose derivatives.

Authors:  K Fujikawa; Y Tsukamoto; T Oki; Y C Lee
Journal:  Glycobiology       Date:  1998-04       Impact factor: 4.313

Review 3.  Glycosylation in cellular mechanisms of health and disease.

Authors:  Kazuaki Ohtsubo; Jamey D Marth
Journal:  Cell       Date:  2006-09-08       Impact factor: 41.582

4.  Water-soluble pradimicin derivatives, synthesis and antifungal evaluation of N,N-dimethyl pradimicins.

Authors:  T Oki; M Kakushima; M Nishio; H Kamei; M Hirano; Y Sawada; M Konishi
Journal:  J Antibiot (Tokyo)       Date:  1990-10       Impact factor: 2.649

5.  Pradimicins M, N, O and P, new dihydrobenzo[a]naphthacenequinones produced by blocked mutants of Actinomadura hibisca P157-2.

Authors:  Y Sawada; T Tsuno; H Yamamoto; M Nishio; M Konishi; T Oki
Journal:  J Antibiot (Tokyo)       Date:  1990-11       Impact factor: 2.649

Review 6.  Synthetic lectins.

Authors:  Anthony P Davis
Journal:  Org Biomol Chem       Date:  2009-08-05       Impact factor: 3.876

7.  Pradimicin-IRD from Amycolatopsis sp. IRD-009 and its antimicrobial and cytotoxic activities.

Authors:  Anelize Bauermeister; Felipe A Calil; Francisco das C L Pinto; Talita C T Medeiros; Larissa C Almeida; Leonardo J Silva; Itamar S de Melo; Tiago D Zucchi; Letícia V Costa-Lotufo; Luiz A B Moraes
Journal:  Nat Prod Res       Date:  2018-02-16       Impact factor: 2.861

8.  In-depth analyses of native N-linked glycans facilitated by high-performance anion exchange chromatography-pulsed amperometric detection coupled to mass spectrometry.

Authors:  Zoltan Szabo; James R Thayer; Yury Agroskin; Shanhua Lin; Yan Liu; Kannan Srinivasan; Julian Saba; Rosa Viner; Andreas Huhmer; Jeff Rohrer; Dietmar Reusch; Rania Harfouche; Shaheer H Khan; Christopher Pohl
Journal:  Anal Bioanal Chem       Date:  2017-03-09       Impact factor: 4.142

9.  Synthesis and antifungal activities of pradimicin derivatives, modification at C4'-position.

Authors:  H Kamachi; S Iimura; S Okuyama; H Hoshi; S Tamura; M Shinoda; K Saitoh; M Konishi; T Oki
Journal:  J Antibiot (Tokyo)       Date:  1992-09       Impact factor: 2.649

10.  Existence of branched side chains in the cell wall mannan of pathogenic yeast, Candida albicans. Structure-antigenicity relationship between the cell wall mannans of Candida albicans and Candida parapsilosis.

Authors:  N Shibata; K Ikuta; T Imai; Y Satoh; R Satoh; A Suzuki; C Kojima; H Kobayashi; K Hisamichi; S Suzuki
Journal:  J Biol Chem       Date:  1995-01-20       Impact factor: 5.157

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