| Literature DB >> 35011279 |
Ana R R P Almeida1, Bruno D A Pinheiro1, Ana I M C Lobo Ferreira1, Manuel J S Monte1.
Abstract
The present work reports an experimental thermodynamic study of two nitrogen heterocyclic organic compounds, fenclorim and clopyralid, that have been used as herbicides. The sublimation vapor pressures of fenclorim (4,6-dichloro-2-phenylpyrimidine) and of clopyralid (3,6-dichloro-2-pyridinecarboxylic acid) were measured, at different temperatures, using a Knudsen mass-loss effusion technique. The vapor pressures of both crystalline and liquid (including supercooled liquid) phases of fenclorim were also determined using a static method based on capacitance diaphragm manometers. The experimental results enabled accurate determination of the standard molar enthalpies, entropies and Gibbs energies of sublimation for both compounds and of vaporization for fenclorim, allowing a phase diagram representation of the (p,T) results, in the neighborhood of the triple point of this compound. The temperatures and molar enthalpies of fusion of the two compounds studied were determined using differential scanning calorimetry. The standard isobaric molar heat capacities of the two crystalline compounds were determined at 298.15 K, using drop calorimetry. The gas phase thermodynamic properties of the two compounds were estimated through ab initio calculations, at the G3(MP2)//B3LYP level, and their thermodynamic stability was evaluated in the gaseous and crystalline phases, considering the calculated values of the standard Gibbs energies of formation, at 298.15 K. All these data, together with other physical and chemical properties, will be useful to predict the mobility and environmental distribution of these two compounds.Entities:
Keywords: clopyralid; fenclorim; heat capacities; phase transitions; thermodynamic stability; vapor pressures
Year: 2021 PMID: 35011279 PMCID: PMC8746602 DOI: 10.3390/molecules27010039
Source DB: PubMed Journal: Molecules ISSN: 1420-3049 Impact factor: 4.411
Figure 1Structural formulas of the compounds studied in this work. (a) Fenclorim (4,6-dichloro-2-phenylpyrimidine); (b) Clopyralid (3,6-dichloro-2-pyridinecarboxylic acid).
Source, purity and methods of purification and analysis of the two compounds studied.
| Compound | CASNR | Source | Minimum Initial Purity | Purification Method | Final Mass Fraction Purity | Analysis | Water Content b |
|---|---|---|---|---|---|---|---|
| Fenclorim | 3740-92-9 | TCI | 0.999 c | Sublimation d | 0.9993 | GC | 0.02 ± 0.01 |
| Clopyralid | 1702-17-6 | TCI | >0.98 e | 0.9989 | 0.04 ± 0.01 |
a Gas-liquid chromatography with flame ionization detector (FID). b Determined using Karl Fisher coulometric titration. c Analysis certified by the manufacturer. d Under reduced pressure. e Minimum purity degree announced by the supplier.
Vapor pressure results a.
| 100Δ | 100Δ | 100Δ | ||||||
|---|---|---|---|---|---|---|---|---|
| Fenclorim | ||||||||
| Crystalline phase (Knudsen effusion method) c | ||||||||
| 311.11 | 0.106 | 0.2 | 319.31 | 0.279 | 0.0 | 327.25 | 0.677 | −0.5 |
| 313.29 | 0.136 | −1.2 | 321.27 | 0.355 | 1.6 | 329.11 | 0.833 | 0.0 |
| 315.23 | 0.172 | −0.8 | 323.10 | 0.430 | 0.1 | 331.27 | 1.051 | 0.0 |
| 317.10 | 0.220 | 1.8 | 325.28 | 0.538 | −1.8 | 333.23 | 1.301 | 0.6 |
| Crystalline phase (Static method) | ||||||||
| 326.01 | 0.58 | −1.1 | 339.81 | 2.54 | 0.8 | 353.58 | 9.67 | 0.8 |
| 327.95 | 0.72 | −0.7 | 341.81 | 3.09 | 0.3 | 355.57 | 11.51 | −0.2 |
| 329.90 | 0.89 | −0.7 | 343.77 | 3.75 | 0.2 | 357.55 | 13.79 | −0.3 |
| 331.91 | 1.11 | −0.1 | 345.72 | 4.57 | 0.8 | 359.49 | 16.35 | −0.8 |
| 333.91 | 1.37 | −0.1 | 347.70 | 5.52 | 0.5 | 361.50 | 19.64 | −0.4 |
| 335.88 | 1.69 | 0.3 | 349.70 | 6.69 | 0.5 | 363.49 | 23.32 | −0.9 |
| 337.86 | 2.09 | 1.1 | 351.65 | 8.02 | 0.2 | 365.53 | 28.05 | 0.2 |
| Liquid phase (Static method) | ||||||||
| 338.80 | 4.40 d | −0.1 | 360.41 | 20.97 d | 0.8 | 382.19 | 80.91 | −0.4 |
| 340.84 | 5.13 d | −0.3 | 362.38 | 23.91 d | 0.8 | 384.18 | 90.85 | −0.4 |
| 342.76 | 5.95 d | 0.0 | 364.43 | 27.33 d | 0.7 | 386.23 | 102.8 | 0.2 |
| 344.71 | 6.92 d | 0.5 | 366.43 | 30.85 d | −0.1 | 388.06 | 114.7 | 0.8 |
| 346.72 | 8.00 d | 0.2 | 368.43 | 35.37 | 0.7 | 390.07 | 126.6 | −0.6 |
| 348.67 | 9.21 d | 0.1 | 370.36 | 39.54 | −0.3 | 392.06 | 143.2 | 0.7 |
| 350.60 | 10.55 d | −0.1 | 372.36 | 45.07 | 0.3 | 393.98 | 157.7 | −0.1 |
| 352.60 | 12.18 d | 0.1 | 374.42 | 50.47 | −1.1 | 396.07 | 177.0 | 0.1 |
| 354.43 | 13.72 d | −0.8 | 376.30 | 57.21 | 0.0 | 397.94 | 194.6 | −0.4 |
| 356.55 | 15.91 d | −0.7 | 378.37 | 64.37 | −0.7 | 399.88 | 217.0 | 0.2 |
| 358.53 | 18.29 d | −0.2 | 380.22 | 72.49 | 0.2 | |||
| Clopyralid | ||||||||
| Crystalline phase (Knudsen effusion method) c | ||||||||
| 334.11 | 0.107 | 1.9 | 342.36 | 0.266 | −1.3 | 350.40 | 0.640 | −0.4 |
| 336.38 | 0.137 | 0.1 | 344.36 | 0.330 | −1.6 | 352.13 | 0.783 | 1.4 |
| 338.46 | 0.172 | −1.0 | 346.12 | 0.410 | 0.8 | 354.41 | 0.985 | 0.7 |
| 340.12 | 0.211 | 0.5 | 348.34 | 0.508 | −1.6 | 356.38 | 1.203 | 0.4 |
a The standard uncertainty of the temperature is u(T/K) = 0.01 and the expanded uncertainties (0.95 confidence level, k = 2) of the vapor pressures are U(p/Pa) = 0.01 + 0.0050 (p/Pa) for static pressures; u(p/Pa) = 0.02 for the effusion pressures. b Δp = p − pcalc, where pcalc is calculated from the Clarke and Glew, Equation (2), with parameters given in Table 3. c The reported effusion pressures are the mean of the values obtained using the small, medium, and large effusion orifices. d Vapor pressures of the supercooled liquid.
Standard (po = 105 Pa) thermodynamic properties of sublimation and of vaporization of the compounds studied.
| Δ |
|
|
|
|
|
|
|
|
|---|---|---|---|---|---|---|---|---|
| K | K | kJ.mol−1 | Pa | kJ.mol−1 | J.K−1.mol−1 | J.K−1.mol−1 | ||
| Fenclorim | ||||||||
| Crystalline phase (Knudsen effusion method) | ||||||||
| 311.1 to 333.2 | 298.15 | 38.19 ± 0.06 | 2.04 × 10−2 | 98.1 ± 0.8 | 200.9 ± 2.7 | 0.9998 | 23.5 ± 5.8 e | 0.0110 |
| 322.17 f | 33.38 ± 0.02 | 3.87 × 10−1 | 97.6 ± 0.8 | |||||
| Crystalline phase (static method) | ||||||||
| 326.0 to 365.5 | 298.15 | 38.22 ± 0.03 | 2.01 × 10−2 | 98.1 ± 0.2 | 200.8 ± 0.7 | 1.0000 | 23.5 ± 5.8 e | 0.0064 |
| 345.77 f | 28.74 ± 0.02 | 4.55 | 97.0 ± 0.2 | |||||
| Crystalline phase (Knudsen effusion + static methods) | ||||||||
| 311.1 to 365.5 | 298.15 | 38.18 ± 0.06 | 2.05 × 10−2 | 98.0 ± 1.1 | 200.6 ± 3.7 | 1.0000 | 26.4 ± 13.3 g | 0.0092 |
| 338.32 f | 30.20 ± 0.01 | 2.17 | 96.9 ± 0.2 | |||||
| 367.39 h | 24.50 ± 0.03 | 32.9 | 96.1 ± 0.2 | |||||
| Liquid phase (static method) i | ||||||||
| 338.8 to 399.9 | 298.15 | 33.85 ± 0.10 | 1.17 × 10−1 | 76.1 ± 1.0 | 141.7 ± 3.4 | 1.0000 | 61.5 ± 7.1 g | 0.0053 |
| 369.34 f | 24.25 ± 0.01 | 37.2 | 71.7 ± 0.1 | |||||
| 367.39 h | 24.50 ± 0.01 | 32.9 | 71.9 ± 0.1 | |||||
| Clopyralid | ||||||||
| Crystalline phase (Knudsen effusion method) | ||||||||
| 334.1 to 356.4 | 298.15 | 45.82 ± 0.14 | 9.39 × 10−4 | 109.1 ± 1.0 | 212.2 ± 3.4 | 0.9998 | 21.5 ± 4.8 e | 0.0124 |
| 345.24 f | 35.91 ± 0.02 | 3.69 × 10−1 | 108.1 ± 1.0 | |||||
a Uncertainties are expressed as the expanded uncertainty (0.95 level of confidence, k = 2). b Calculated from Equation (2) for three different temperatures (θ = 298.15 K, θ = mean temperature of the experiments and θ = temperature of the triple point). c Calculated using Equation (3); uncertainties calculated through the RSS method. d σr is the relative standard deviation of the fit, defined as . e Calculated as . f Mean temperature. g Adjustable parameter derived from the fittings of Equation (2) to the (p,T) data. Uncertainties are standard deviations of the least-squares regressions. h Temperature of the triple point. i Including supercooled liquid.
Experimental and estimated crystalline standard molar heat capacities , specific heat capacities, , densities and volumetric heat capacities, /Vm, at T = 298.15 K of fenclorim and clopyralid.
| Compound |
| Molar Mass |
| Density |
|
|
|---|---|---|---|---|---|---|
| J.K−1.mol−1 | g·mol−1 | J·K–1·g–1 | g.cm−3 | J·K–1·cm–3 | J·K–1·mol–1 | |
| Fenclorim | 214.3 ± 1.2 | 225.074 | 0.952 ± 0.005 | 1.541 d | 1.467 ± 0.008 | 221.8 ± 17.0 |
| Clopyralid | 175.3 ± 1.2 | 191.999 | 0.913 ± 0.006 | 1.64 ± 0.05 e | 1.497 ± 0.050 | 181.4 ± 17.0 |
a The reported experimental uncertainties are twice the standard deviation of the mean and includes the calibration uncertainty. b Calculated considering the specific heat capacities, , and the experimental density values. c Estimated using the group contribution values proposed by Acree Jr. and Chickos [37]. d Ref. [38]. e Average of three measurements of the volume and mass of three pellets.
Fusion properties: temperature, molar enthalpy and entropy of the compounds studied.
| Method/Ref. | ||||
|---|---|---|---|---|
| Fenclorim | ||||
| 368.61 ± 0.35 | 23.08 ± 0.69 a | 62.6 ± 1.9 | DSC/this work | |
| 367.39 | 24.2 ± 0.2 | VP/this work | ||
| Clopyralid | ||||
| 422.63 ± 0.38 | 27.59 ± 0.67 a | 65.3 ± 1.6 | DSC/this work | |
a Standard uncertainty calculated through the RSS method combining the expanded uncertainties of the four experimental runs (0.95 level of confidence, k = 3.18) with the standard uncertainties of the DSC calibration. b T represents the temperature of fusion or the temperature of the triple point (Ttp). c Uncertainties calculated through the RSS method.
Figure 2Phase diagram of fenclorim. ○, vaporization; ●, vaporization (supercooled liquid); Δ, sublimation (static method); x, sublimation (mean values of Knudsen effusion vapor pressures). Triple point data determined in this work: T = 367.4 K; p = 32.9 Pa.
Figure 3Plot of lnp against 1/T for clopyralid. ○, small effusion orifices; Δ, medium effusion orifices and □, large effusion orifices.
Standard (po = 105 Pa) molar absolute entropies and standard molar enthalpies, entropies and Gibbs energies of formation and sublimation, at T = 298.15 K, of fenclorim and clopyralid.
| Fenclorim | Clopyralid | ||
|---|---|---|---|
| Gas phase | 201.4 ± 2.9 | −280.3 ± 1.7 | |
| 447.6 | 407.7 | ||
| −416.5 | −346.8 | ||
| −124.2 | −103.4 | ||
| 325.6 ± 2.9 | −176.9 ± 1.7 | ||
| Thermodynamic Properties of Sublimation d | 98.0 ± 1.1 | 109.1 ± 1.0 | |
| 200.6 ± 3.7 | 212.2 ± 3.4 | ||
| 38.2 ± 0.1 | 45.8 ± 0.1 | ||
| Crystalline phase | 103.4 ± 3.1 | −389.4 ± 2.0 | |
| 247.0 ± 3.7 | 195.5 ± 3.4 | ||
| −617.1 ± 3.7 | −559.0 ± 3.4 | ||
| −184.0 ± 1.1 | −166.7 ± 1.0 | ||
| 287.4 ± 2.9 | −222.7 ± 1.7 |
a The uncertainty assigned correspond to the expanded uncertainty determined from the estimated standard deviation of the mean (0.95 level of confidence) for the working reactions reported in SI (Tables S7 and S8), using k = 2.20 for fenclorim and k = 2.02 for clopyralid, respectively. b Obtained from G3(MP2)//B3LYP method for a frequency factor scale of 1.0029 [45]. c Calculated using Equation (4). d Derived through vapor pressure measurements. e Calculated from . f Calculated from .
Figure 4Relation between , and for fenclorim and clopyralid in both gaseous and crystalline phases. E =; E =; E =.
Figure 5Schematic representation of the crystalline packing arrangement of 2-pyridinecarboxylic acid (adapted from ref. [42]).