| Literature DB >> 35010785 |
Priscilla Gomes da Silva1,2,3, José Gonçalves4,5, Ariana Isabel Brito Lopes6, Nury Alves Esteves6, Gustavo Emanuel Enes Bamba6, Maria São José Nascimento7, Pedro T B S Branco3, Ruben R G Soares8, Sofia I V Sousa3, João R Mesquita1,2.
Abstract
As the third wave of the COVID-19 pandemic hit Portugal, it forced the country to reintroduce lockdown measures due to hospitals reaching their full capacities. Under these circumstances, environmental contamination by SARS-CoV-2 in different areas of one of Portugal's major Hospitals was assessed between 21 January and 11 February 2021. Air samples (n = 44) were collected from eleven different areas of the Hospital (four COVID-19 and seven non-COVID-19 areas) using Coriolis® μ and Coriolis® Compact cyclone air sampling devices. Surface sampling was also performed (n = 17) on four areas (one COVID-19 and three non-COVID-19 areas). RNA extraction followed by a one-step RT-qPCR adapted for quantitative purposes were performed. Of the 44 air samples, two were positive for SARS-CoV-2 RNA (6575 copies/m3 and 6662.5 copies/m3, respectively). Of the 17 surface samples, three were positive for SARS-CoV-2 RNA (200.6 copies/cm2, 179.2 copies/cm2, and 201.7 copies/cm2, respectively). SARS-CoV-2 environmental contamination was found both in air and on surfaces in both COVID-19 and non-COVID-19 areas. Moreover, our results suggest that longer collection sessions are needed to detect point contaminations. This reinforces the need to remain cautious at all times, not only when in close contact with infected individuals. Hand hygiene and other standard transmission-prevention guidelines should be continuously followed to avoid nosocomial COVID-19.Entities:
Keywords: SARS-CoV-2; air samples; environmental contamination; surface samples
Mesh:
Substances:
Year: 2022 PMID: 35010785 PMCID: PMC8744945 DOI: 10.3390/ijerph19010525
Source DB: PubMed Journal: Int J Environ Res Public Health ISSN: 1660-4601 Impact factor: 3.390
Air ventilation details about the sampling sites.
| Hospital Area | Type of Ventilation and Pressure | People with Access to This Area | |
|---|---|---|---|
| COVID-19 areas | COVID-19 ICU | Mechanic ventilation, negative pressure | Patients and Hospital staff |
| Intermediate COVID-19 ICU | Mechanic ventilation, negative pressure | Patients and Hospital staff | |
| COVID-19 nursing area | Mechanic ventilation, negative pressure | Patients and Hospital staff | |
| COVID-19 testing room | Mechanic ventilation, negative pressure | Patients and Hospital staff | |
| Non-COVID-19 areas | Respiratory diseases observation room | Natural ventilation, neutral pressure | Patients and Hospital staff |
| Respiratory diseases waiting room | Natural ventilation, neutral pressure | Patients, Hospital staff and patients’ companions | |
| Non-respiratory diseases waiting room | Natural ventilation, neutral pressure | Patients, Hospital staff and patients’ companions | |
| Clinical decision unit | Natural ventilation, neutral pressure | Patients and Hospital staff | |
| Urgency care (recovery area) | Natural ventilation, neutral pressure | Patients and Hospital staff | |
| Hospital’s outside entrance atrium | Natural ventilation, neutral pressure | Open to the general public | |
| Hospital staff’s cafeteria | Natural ventilation, neutral pressure | Hospital staff |
Details of the air samples’ collections for SARS-CoV-2 RNA detection in the Hospital.
| Device | Sample ID | Date of Collection | Hospital Area | Sampler Location | Sampling Parameters |
|---|---|---|---|---|---|
| Coriolis® Compact | C1 | 21 January 2021 | ICU COVID-19 | Air sampler placed approximately 1.3 m above the floor and 2 m from a patient bed, in the center of the room | 50 L/min, 60 min |
| C2 | 21 January 2021 | ICU intermediate COVID-19 | Air sampler placed approximately 1.3 m above the floor and 2 m from a patient bed, in the center of the room | 50 L/min, 60 min | |
| C3 | 21 January 2021 | Nursing area COVID-19 | Air sampler placed approximately 1.3 m above the floor and 2 m from a patient bed, in the center of the room | 50 L/min, 60 min | |
| C4 | 27 January 2021 | Respiratory diseases observation room | Air sampler placed approximately 1.3 m above the floor and 2 m from a patient bed, in the center of the room | 50 L/min, 60 min | |
| C5 | 27 January 2021 | Respiratory diseases waiting room | Air sampler placed approximately 1.3 m above the floor in the center of the room | 50 L/min, 60 min | |
| C6 | 27 January 2021 | Clinical decision unit | Air sampler placed approximately 1.3 m above the floor and 2 m from a patient bed, in the center of the room | 50 L/min, 60 min | |
| C7 | 2 February 2021 | COVID-19 testing room | Air sampler placed approximately 1.3 m above the floor in the center of the room | 50 L/min, 60 min | |
| C8 | 2 February 2021 | Non-respiratory diseases waiting room | Air sampler placed approximately 1.3 m above the floor in the center of the room | 50 L/min, 60 min | |
| C9 | 2 February 2021 | Urgency Care (Recovery area) | Air sampler placed approximately 1.3 m above the floor and 2 m from a patient bed, in the center of the room | 50 L/min, 60 min | |
| C10 | 11 February 2021 | Hospital’s outside entrance atrium | Air sampler placed approximately 1.3 m above the floor in the center of the room | 50 L/min, 60 min | |
| C11 | 11 February 2021 | Hospital employe’s cafeteria | Air sampler placed approximately 1.3 m above the floor in the center of the room | 50 L/min, 60 min | |
| Coriolis® μ | M1 | 21 January 2021 | ICU COVID-19 | Air sampler placed approximately 1.3 m above the floor and 2 m from a patient bed, in the center of the room | 100 L/min, 10 min |
| M2 | 21 January 2021 | ICU COVID-19 | Air sampler placed approximately 1.3 m above the floor and 2 m from a patient bed, in the center of the room | 200 L/min, 10 min | |
| M3 | 21 January 2021 | ICU COVID-19 | Air sampler placed approximately 1.3 m above the floor and 2 m from a patient bed, in the center of the room | 300 L/min, 10 min | |
| M4 | 21 January 2021 | ICU intermediate COVID-19 | Air sampler placed approximately 1.3 m above the floor and 2 m from a patient bed, in the center of the room | 100 L/min, 10 min | |
| M5 | 21 January 2021 | ICU intermediate COVID-19 | Air sampler placed approximately 1.3 m above the floor and 2 m from a patient bed, in the center of the room | 200 L/min, 10 min | |
| M6 | 21 January 2021 | ICU intermediate COVID-19 | Air sampler placed approximately 1.3 m above the floor and 2 m from a patient bed, in the center of the room | 300 L/min, 10 min | |
| M7 | 21 January 2021 | Nursing area COVID-19 | Air sampler placed approximately 1.3 m above the floor and 2 m from a patient bed, in the center of the room | 100 L/min, 10 min | |
| M8 | 21 January 2021 | Nursing area COVID-19 | Air sampler placed approximately 1.3 m above the floor and 2 m from a patient bed, in the center of the room | 200 L/min, 10 min | |
| M9 | 21 January 2021 | Nursing area COVID-19 | Air sampler placed approximately 1.3 m above the floor and 2 m from a patient bed, in the center of the room | 300 L/min, 10 min | |
| M10 | 27 January 2021 | Respiratory diseases observation room | Air sampler placed approximately 1.3 m above the floor and 2 m from a patient bed, in the center of the room | 100 L/min, 10 min | |
| M11 | 27 January 2021 | Respiratory diseases observation room | Air sampler placed approximately 1.3 m above the floor and 2 m from a patient bed, in the center of the room | 200 L/min, 10 min | |
| M12 | 27 January 2021 | Respiratory diseases observation room | Air sampler placed approximately 1.3 m above the floor and 2 m from a patient bed, in the center of the room | 300 L/min, 10 min | |
| M13 | 27 January 2021 | Respiratory diseases waiting room | Air sampler placed approximately 1.3 m above the floor in the center of the room | 100 L/min, 10 min | |
| M14 | 27 January 2021 | Respiratory diseases waiting room | Air sampler placed approximately 1.3 m above the floor in the center of the room | 200 L/min, 10 min | |
| M15 | 27 January 2021 | Respiratory diseases waiting room | Air sampler placed approximately 1.3 m above the floor in the center of the room | 300 L/min, 10 min | |
| M16 | 27 January 2021 | Clinical decision unit | Air sampler placed approximately 1.3 m above the floor and 2 m from a patient bed, in the center of the room | 100 L/min, 10 min | |
| M17 | 27 January 2021 | Clinical decision unit | Air sampler placed approximately 1.3 m above the floor and 2 m from a patient bed, in the center of the room | 200 L/min, 10 min | |
| M18 | 27 January 2021 | Clinical decision unit | Air sampler placed approximately 1.3 m above the floor and 2 m from a patient bed, in the center of the room | 300 L/min, 10 min | |
| M19 | 2 February 2021 | COVID-19 testing room | Air sampler placed approximately 1.3 m above the floor in the center of the room | 100 L/min, 10 min | |
| M20 | 2 February 2021 | COVID-19 testing room | Air sampler placed approximately 1.3 m above the floor in the center of the room | 200 L/min, 10 min | |
| M21 | 2 February 2021 | COVID-19 testing room | Air sampler placed approximately 1.3 m above the floor in the center of the room | 300 L/min, 10 min | |
| M22 | 2 February 2021 | Non-respiratory diseases waiting room | Air sampler placed approximately 1.3 m above the floor in the center of the room | 100 L/min, 10 min | |
| M23 | 2 February 2021 | Non-respiratory diseases waiting room | Air sampler placed approximately 1.3 m above the floor in the center of the room | 200 L/min, 10 min | |
| M24 | 2 February 2021 | Non-respiratory diseases waiting room | Air sampler placed approximately 1.3 m above the floor in the center of the room | 300 L/min, 10 min | |
| M25 | 2 February 2021 | Urgency Care (Recovery area) | Air sampler placed approximately 1.3 m above the floor and 2 m from a patient bed, in the center of the room | 100 L/min, 10 min | |
| M26 | 2 February 2021 | Urgency Care (Recovery area) | Air sampler placed approximately 1.3 m above the floor and 2 m from a patient bed, in the center of the room | 200 L/min, 10 min | |
| M27 | 2 February 2021 | Urgency Care (Recovery area) | Air sampler placed approximately 1.3 m above the floor and 2 m from a patient bed, in the center of the room | 300 L/min, 10 min | |
| M28 | 11 February 2021 | Hospital’s outside entrance atrium | Air sampler placed approximately 1.3 m above the floor in the center of the room | 100 L/min, 10 min | |
| M29 | 11 February 2021 | Hospital’s outside entrance atrium | Air sampler placed approximately 1.3 m above the floor in the center of the room | 200 L/min, 10 min | |
| M30 | 11 February 2021 | Hospital’s outside entrance atrium | Air sampler placed approximately 1.3 m above the floor in the center of the room | 300 L/min, 10 min | |
| M31 | 11 February 2021 | Hospital staff’s cafeteria | Air sampler placed approximately 1.3 m above the floor in the center of the room | 100 L/min, 10 min | |
| M32 | 11 February 2021 | Hospital staff’s cafeteria | Air sampler placed approximately 1.3 m above the floor in the center of the room | 200 L/min, 10 min | |
| M33 | 11 February 2021 | Hospital staff’s cafeteria | Air sampler placed approximately 1.3 m above the floor in the center of the room | 300 L/min, 10 min |
Details of the surface samples’ collections for SARS-CoV-2 RNA detection in the Hospital.
| Sample ID | Hospital Area | Collection Date | Sample Location |
|---|---|---|---|
| S1 | COVID-19 testing room | 2 February 2021 | Hand sanitizer dispenser |
| S2 | Instruments’ counter | ||
| S3 | Glove box | ||
| S4 | Wall of a COVID-19 testing booth | ||
| S5 | Paper dispenser | ||
| S6 | Non-respiratory disease waiting room | 2 February 2021 | Faucet handle |
| S7 | Vending machine (buttons) | ||
| S8 | Bathroom: flush button | ||
| S9 | Bathroom: inside doorknob | ||
| S10 | Bathroom: outside doorknob | ||
| S11 | Hospital’s outside outside entrance atrium | 11 February 2021 | Statue (approx. 3 m away from outside entrance) |
| S12 | ATM (buttons) | ||
| S13 | Fire extinguisher (approx. 3 m away from outside entrance) | ||
| S14 | Hospital staff’s cafeteria | 11 February 2021 | Soap dispenser |
| S15 | Faucet handle | ||
| S16 | Paper dispenser | ||
| S17 | Table sign on a table * |
* Table sign: a sign with precautions to avoid contamination was placed on the table.
Details of Hospital area, sampling location and viral genome copy numbers of the positive air and surface samples.
| Sample ID | Hospital Area | Sample Location | Copy Number (N1 Gene) | Copy Number (N2 Gene) | |
|---|---|---|---|---|---|
| Air samples | C1 | COVID-19 ICU | Air sampler placed approximately 1.3 m above the floor and 2 m from intubated patients beds, in the center of the room | 6000 copies/m3 | 6575 copies/m3 |
| M1 | 6362.5 copies/m3 | 6662.5 copies/m3 | |||
| Surface samples | S4 | COVID-19 testing room | Wall of a COVID-19 testing booth | 200.6 copies/cm2 | No amplification detected |
| S6 | Non-respiratory disease patients’ waiting room | Faucet handle | 179.2 copies/cm2 | No amplification detected | |
| S8 | Bathroom: flush button | No amplification detected | 201.7 copies/cm2 |