Aniruddha Adhikari1, Uttam Pal2, Sayan Bayan3, Susmita Mondal1, Ria Ghosh2, Soumendra Darbar4, Tanusri Saha-Dasgupta2,3, Samit Kumar Ray3,5, Samir Kumar Pal1,2. 1. Department of Chemical, Biological and Macromolecular Sciences, S. N. Bose National Centre for Basic Sciences, Block JD, Sector 3, Salt Lake, Kolkata 700106, India. 2. Technical Research Centre, S. N. Bose National Centre for Basic Sciences, Block JD, Sector 3, Salt Lake, Kolkata 700106, India. 3. Department of Condensed Matter Physics and Material Sciences, S. N. Bose National Centre for Basic Sciences, Block JD, Sector 3, Salt Lake, Kolkata 700106, India. 4. Research & Development Division, Dey's Medical Stores (Mfg.) Ltd., 62, Bondel Road, Ballygunge, Kolkata 700019, India. 5. Department of Physics, Indian Institute of Technology Kharagpur, Kharagpur 721302, India.
Abstract
Centers for Disease Control and Prevention (CDC) warns the use of one-way valves or vents in face masks for potential threat of spreading COVID-19 through expelled respiratory droplets. Here, we have developed a nanoceutical cotton fabric duly sensitized with non-toxic zinc oxide nanomaterial for potential use as a membrane filter in the one-way valve for the ease of breathing without the threat of COVID-19 spreading. A detailed computational study revealed that zinc oxide nanoflowers (ZnO NFs) with almost two-dimensional petals trap SARS-CoV-2 spike proteins, responsible to attach to ACE-2 receptors in human lung epithelial cells. The study also confirmed significant denaturation of the spike proteins on the ZnO surface, revealing removal of the virus upon efficient trapping. Following the computational study, we have synthesized ZnO NF on a cotton matrix using a hydrothermal-assisted strategy. Electron-microscopic, steady-state, and picosecond-resolved spectroscopic studies confirm attachment of ZnO NF to the cotton (i.e., cellulose) matrix at the atomic level to develop the nanoceutical fabric. A detailed antimicrobial assay using Pseudomonas aeruginosa bacteria (model SARS-CoV-2 mimic) reveals excellent antimicrobial efficiency of the developed nanoceutical fabric. To our understanding, the nanoceutical fabric used in the one-way valve of a face mask would be the choice to assure breathing comfort along with source control of COVID-19 infection. The developed nanosensitized cloth can also be used as an antibacterial/anti CoV-2 washable dress material in general.
Centers for Disease Control and Prevention (CDC) warns the use of one-way valves or vents in face masks for potential threat of spreading COVID-19 through expelled respiratory droplets. Here, we have developed a nanoceutical cotton fabric duly sensitized with non-toxic zinc oxide nanomaterial for potential use as a membrane filter in the one-way valve for the ease of breathing without the threat of COVID-19 spreading. A detailed computational study revealed that zinc oxide nanoflowers (ZnO NFs) with almost two-dimensional petals trap SARS-CoV-2 spike proteins, responsible to attach to ACE-2 receptors in human lung epithelial cells. The study also confirmed significant denaturation of the spike proteins on the ZnO surface, revealing removal of the virus upon efficient trapping. Following the computational study, we have synthesized ZnO NF on a cotton matrix using a hydrothermal-assisted strategy. Electron-microscopic, steady-state, and picosecond-resolved spectroscopic studies confirm attachment of ZnO NF to the cotton (i.e., cellulose) matrix at the atomic level to develop the nanoceutical fabric. A detailed antimicrobial assay using Pseudomonas aeruginosa bacteria (model SARS-CoV-2 mimic) reveals excellent antimicrobial efficiency of the developed nanoceutical fabric. To our understanding, the nanoceutical fabric used in the one-way valve of a face mask would be the choice to assure breathing comfort along with source control of COVID-19 infection. The developed nanosensitized cloth can also be used as an antibacterial/anti CoV-2 washable dress material in general.
The emerging coronavirus disease 2019 (COVID-19) pandemic, caused by severe acute
respiratory syndrome-related coronavirus 2 (SARS-CoV-2), has imposed a global socio-economic
burden, particularly to the public and private healthcare systems due to unprecedented
morbidity, mortality, and economic disruption.[1] At the time of writing,
over 81.27 million patients have been infected by SARS-CoV-2, with over 1.77 million deaths
worldwide.[2] Recently, some of the vaccine candidates have received
conditional approval from various authorities around the world despite suffering from
numerous issues like dose, interval between two shots, and so forth. Even after that, it
will take several months to reach the common people due to challenges like regulatory
issues, large-scale production, and mass distribution to the public.[3]
Therefore, the sole line of defence recommended by almost all the apex medical bodies
throughout the world is “non-pharmacological interventions” like the use of
personal protective equipment (PPE) (e.g., face mask, face shield, gloves, and so forth) and
personal hygiene (e.g., handwashing and cough and sneeze etiquette).[4−6] As the world is ready to reopen and most of the countries are waiting
for a second or third wave of virus outbreak, PPE, particularly face masks, has become an
integral part of day-to-day life. Although face masks are commonly used to provide
protection to the wearer (e.g., first responders), they were originally introduced to
protect surrounding persons.[7] Generally, the term “face
mask” covers a broad range of PPE that reduces the transmission of respiratory
particles or droplets.[7]Recently, Centers for Disease Control and Prevention (CDC) warned against the use of
one-way valves or vents in face masks for potential threat of spreading COVID-19 through
expelled respiratory droplets.[8] However, the face masks without valves or
vents can cause several health problems and severe discomfort to the
wearer.[9,10] Some
pieces of evidence suggest that commonly available N95 face masks can lead to changes in
blood oxygen (O2) and carbon dioxide (CO2) levels when used for long
periods, especially by people who are elderly or obese or have chronic obstructive pulmonary
disease.[9−11] Other adverse health
effects range from increased blood pressures, increased heart rates, chest pain, and
hypercapnia.[12,13] One
of the feasible solutions to this problem is by covering the valve or vent with a porous
filter that can either trap or kill the microorganisms including viruses, alongside allowing
the air to flow across. Unfortunately, no study has been performed up to date to design such
filters or to address the problem by other means. In this regard, filters made up of natural
fabrics (e.g., cotton) functionalized with antimicrobial agents could be an effective
solution.Although a vast diversity of organic compounds with recognized antimicrobial activity have
been incorporated into polymers in order to develop antimicrobial fibers, they exhibit
several drawbacks related to their thermal and chemical instability, which could lead to
difficulties throughout the functionalization process and also produce fibrous mats with
limited antimicrobial activity due to partial decomposition of the antimicrobial
agent.[14] Moreover, the massive use of antibiotics has led to another
global problem, the origination of antibiotic-resistant bacteria.[15,16] Thus, there is a growing need to
explore novel antimicrobial agents to functionalize the natural or synthetic fabrics not
only to prevent COVID-19 spread but also for other applications like clothing materials for
patients to stop hospital-acquired infections, which is also a global challenge.Consequently, nanoscale materials with unique and tuneable physicochemical properties
(i.e., higher chemical, mechanical, and thermal stability) are interesting elements for
preparation of hygienic surfaces. For example, silver ions and silver-based nanocompounds
are highly toxic to microorganisms, showing strong biocidal effects on various species of
bacteria.[17−19] Gold
nanoparticles,[20,21]
bimetallic nanomaterials (e.g., Ag/Au, Ag/Pt, and so forth),[22,23] graphene-based materials,[24] and metal oxide nanoparticles [e.g., titanium dioxide (TiO2),
copper oxide (CuO), silica (SiO2), and so forth][25−27] are other examples. However, they all suffer from the problem of
inherent toxicity of the nanomaterials, limiting their human use.[28−32] Recently, several ultrasmall metal nanoclusters
particularly of gold (Au) and silver (Ag) have shown wide-spectrum antimicrobial
activity.[33−36] Even these ultrasmall metal nanoclusters have been
impregnated into biocompatible hydrogels to eradicate bacterial biofilms.[34] The nanoclusters induce metabolic imbalance in the microorganism, leading to enhanced
reactive oxygen species generation, which in turn kills the microbe.[33]
One of the advantages of these nanoclusters is the possibility of atomic-level control of
the size, structure, composition, and surface functionalization leading to a more
personalized treatment strategy.[37] Moreover, they do not pose the problem
of antibiotic resistance. However, biocompatibility and cytotoxicity of these materials
remain a key concern. Therefore, it is of considerable interest to design a
nanoparticle-functionalized fabric (i.e., nanoceutical fabric) that can efficiently kill or
trap microorganisms without any harmful side effect to the user.In this study, we have rationally designed a nanoceutical cotton fabric duly sensitized
with the non-toxic zinc oxide (ZnO) nanomaterial for potential use as a membrane filter in
the one-way valve or vent of the face mask for the ease of breathing without the risk of
COVID-19 spread. A comprehensive computer-assisted simulation study revealed the unique
potential of ZnO nanoflowers (ZnO NFs) having nearly two-dimensional nanopetals in
entrapment and denaturation of coronavirus spike protein (resulting into eradication of the
virus), which mediates the viral pathogenesis through attachment to angiotensin converting
enzyme-2 (ACE-2) receptors in the human respiratory tract. Subsequently, we have synthesized
ZnO NF on a natural cotton fiber matrix using a one-pot hydrothermal-assisted approach.
In-depth electron-microscopic, steady-state, and picosecond-resolved spectroscopic studies
confirm the attachment of ZnO NF to the cellulose matrix of cotton at the atomic level to
develop the nanoceutical fabric filter. An exhaustive antimicrobial study using a capsule
containing virulent Pseudomonas aeruginosa as a mimic of coronavirus (as
the lectins in P. aeruginosa share similar homology to coronavirus spike
protein) reveals excellent antimicrobial (bactericidal) efficiency of the developed
nanoceutical fabric filter. To our understanding, the novel nanoceutical fabric used in the
one-way valve of a face mask would be the choice to assure breathing comfort along with
source control of COVID-19 infection. The developed nanosensitized cloth can further be used
as an antibacterial (as well as anti SARS CoV-2) dress material in general to stop
hospital-acquired infections.
Results and Discussion
Prediction of the Potential Antiviral Nanostructure and Model Experimental
Organism
SARS-CoV-2 (Figure a,b), generally initiates
its infection process by binding to functional receptors on the membrane of a host
cell.[38] In the case of humans, membrane-bound ACE-2 (the functional
host receptor) plays a crucial role in pathogenesis of COVID-19 providing viral entry to
human cells (Figure c,d).[39,40] The spike (S) protein present in
the outer surface of SARS-CoV-2 binds to human ACE-2 with a very strong affinity and
subsequently mediates membrane fusion leading to host cell entry of the virus (Figure c,d).[39,41,42] The computed binding
energy for human ACE-2 and SARS-CoV-2 S-protein from the crystal structure (PDB ID:
6LZG; Figure
d) of the complex was found to be −20.28 kcal
mol–1. Following minimization of the complex under the optimized
potentials for liquid simulations[43] (OPLS) force field, the binding
energy drops to −29.83 kcal mol–1. This strong binding energy can
be attributed to the large surface area at the protein–protein interface and
several favorable intermolecular interactions including hydrogen bonding, ionic, and
hydrophobic interactions. Hence, it is difficult to develop small-molecule competitive
inhibitors that can disrupt such an elaborate molecular recognition. Therefore, we looked
into the prospective nanomaterials having a similar magnitude to ACE-2 protein along with
the ability to compete for the viral S-protein binding. In this regard, our primary choice
was ZnO considering its biocompatibility and known antimicrobial and antiviral
effect.[44−46] In a computer
simulation, a spherical ZnO nanoparticle (∼30 nm diameter, similar dimensions of
ACE-2) was constructed and its interaction with the viral S-protein was studied (Figure e). The spherical nanoparticle provided a
convex surface for interactions similar to the ACE-2 receptor protein. Since the geometry
of the nanosurface at the binding region is known to affect the
protein–nanomaterial interaction,[47,48] we further simulated the interaction of S-protein with
the flat sheet-like ZnO surface having various exposed crystal facets
(⟨100⟩, ⟨101⟩, and ⟨002⟩) as observed in the
X-ray diffraction (XRD) pattern (vide infra).
Figure 1
Interaction of SARS-CoV-2 spike protein RBD with ZnO nanofacets leads to denaturation
of spike RBD. (a) Schematic representation of the SARS-CoV-2 structure. This is an
enveloped, positive sense RNA virus having spike proteins at the outer surface. (b)
Side view of the pre-fusion structure of the SARS-CoV-2 spike protein with a single
RBD in the upconformation. (c) SARS-CoV-2 infection through the human respiratory
tract. (d) Internalization of SARS-CoV-2 by membrane fusion. The spike protein binds
to ACE-2 of the host cell via RBD and further releases its RNA to exert pathogenesis.
(e) Crystal facets of the wurtzite zinc oxide (ZnO) nanostructure used in
computational studies. (f–i) Binding of spike RBD (molecular docking) with
different facets of the ZnO nanostructure as well as the spherical ZnO nanoparticle.
The spike protein strongly binds to the ZnO crystal facets and denatures upon
interaction. The native structure of the protein is represented by the light color,
while the dark color represents the denatured structure after interaction. (j) rmsd
values of each amino acid after energy minimization under OPLS show the degree of
denaturation.
Interaction of SARS-CoV-2 spike protein RBD with ZnO nanofacets leads to denaturation
of spike RBD. (a) Schematic representation of the SARS-CoV-2 structure. This is an
enveloped, positive sense RNA virus having spike proteins at the outer surface. (b)
Side view of the pre-fusion structure of the SARS-CoV-2 spike protein with a single
RBD in the upconformation. (c) SARS-CoV-2 infection through the human respiratory
tract. (d) Internalization of SARS-CoV-2 by membrane fusion. The spike protein binds
to ACE-2 of the host cell via RBD and further releases its RNA to exert pathogenesis.
(e) Crystal facets of the wurtzite zinc oxide (ZnO) nanostructure used in
computational studies. (f–i) Binding of spike RBD (molecular docking) with
different facets of the ZnO nanostructure as well as the spherical ZnO nanoparticle.
The spike protein strongly binds to the ZnO crystal facets and denatures upon
interaction. The native structure of the protein is represented by the light color,
while the dark color represents the denatured structure after interaction. (j) rmsd
values of each amino acid after energy minimization under OPLS show the degree of
denaturation.As evident from the molecular docking study, the SARS-CoV-2 S-protein can bind favorably
with both the ZnO nanosphere and the flat facets (⟨100⟩,
⟨101⟩, and ⟨002⟩) of the ZnO nanostructure with binding
energies of −17, −11, −21, and −16 kcal
mol–1, respectively. Binding on the ⟨101⟩ ZnO
nanosurface was very much comparable with that of ACE-2. After the energy minimization of
the docked complexes, the binding energies were found to be −21, −13,
−40, and −22 kcal mol–1, respectively. Figure e–i shows the bound conformations of spike
protein with the ZnO nanosphere and various facets on ZnO nanosurfaces. Interestingly,
when structural deviations (in terms of root-mean-square deviation, rmsd) were studied and
compared between the docked and energy-minimized conformations of the spike receptor
binding domain (RBD) (Figure j), large
structural perturbations become evident in the binding regions of SARS-CoV-2 S-protein due
to binding on ZnO nanofacets. Least change was observed in the case of the nanosphere,
whereas most change occurred on the ⟨101⟩ facet of ZnO. Since the structure
and function of proteins are highly correlated, infliction of a large structural
perturbation in the protein structure by an inhibitor or ligand is generally associated
with its loss of function.[43] The observed in silico
structural changes, therefore, indicate that the viral S-protein may lose its pathological
function if it comes in contact with the ZnO nanosurface.Bearing in mind the transmissibility and pathogenicity of SARS-CoV-2 as well as
unavailability of the SARS-CoV-2 strain and biosafety requirements for experimental
studies, we looked for similar organisms as an alternative model preferably of the
bacterial origin having adhesion proteins analogous to viral S-protein. Lectin-A (LecA)
protein of P. aeruginosa (Figure a) was found to show a high degree of similarity in the binding site residues
as evident from the amino acid sequence alignment depicted in Figure
a,b. In the largest 32 amino acid overlap region
(14–45:149–180), the two proteins showed 28.1% identity and 62.5% similarity
with a Waterman–Eggert score of 52. Detailed sequence alignments of the Spike RBD
and LecA protein are given in the Supporting Information. Apart from the structural similarity, LecA resembles
the function of viral S-protein and mediates bacterium-host cell recognition and adhesion,
which are the critical steps in initiating P. aeruginosa
pathogenesis.[49] Interestingly, for both SARS-CoV-2 and P.
aeruginosa, lungs are the primary target organs, and both of them cause similar
acute and chronic lung infection.[49−51] Therefore,
considering the structural and functional resemblances in a possible example of molecular
mimicry, P. aeruginosa LecA was chosen as an alternative to SARS-CoV-2
S-protein for subsequent computational and experimental binding studies with the ZnO
nanostructures.
Figure 2
Interaction of a mimic of SARS-CoV-2 spike RBD, lecA of P.
aeruginosa, with ZnO nanofacets leads to denaturation. (a) Tetrameric
crystal structure of P. aeruginosa lecA. (b) Computed structural
similarity between lecA and spike RBD. (c–f) Binding of lecA (molecular
docking) with spherical ZnO nanoparticles as well as different facets of the ZnO
nanostructure. LecA strongly binds to the ZnO crystal facets and denatures upon
interaction. The native structure of the protein is represented by the light color,
while the dark color represents the denatured structure after interaction. (g) rmsd
values of each amino acid after energy minimization under OPLS show the degree of
denaturation.
Interaction of a mimic of SARS-CoV-2 spike RBD, lecA of P.
aeruginosa, with ZnO nanofacets leads to denaturation. (a) Tetrameric
crystal structure of P. aeruginosa lecA. (b) Computed structural
similarity between lecA and spike RBD. (c–f) Binding of lecA (molecular
docking) with spherical ZnO nanoparticles as well as different facets of the ZnO
nanostructure. LecA strongly binds to the ZnO crystal facets and denatures upon
interaction. The native structure of the protein is represented by the light color,
while the dark color represents the denatured structure after interaction. (g) rmsd
values of each amino acid after energy minimization under OPLS show the degree of
denaturation.The molecular docking study illustrates that the P. aeruginosa LecA
protein can bind favorably with the ZnO ⟨100⟩, ⟨101⟩, and
⟨002⟩ nanofacets as well as on the ZnO nanosphere with comparable binding
energies of −9, −11, −12, and −11 kcal
mol–1, respectively. After the energy minimization of the docked
complexes, the binding energies were found to be −11, −14, −26, and
−17 kcal mol–1, respectively. Figure c–f shows the bound conformations of LecA protein with the
ZnO nanosphere and nanofacets, respectively. Structural deviations in terms of rmsds were
studied and compared between the docked and minimized complexes and graphically
represented in Figure g. It is evident from
Figure g that large structural perturbation,
similar to the viral S-protein, takes place in the binding regions of LecA protein on the
ZnO nanofacets.Thus, the computational binding study shows that the ZnO nanosurface can trap the
adhesion proteins of SARS-Cov-2 as well as that of P. aeruginosa. The
sheet-like flat ZnO nanostructures not only bind these adhesion proteins (i.e., viral
S-protein and LecA) but also impart large-scale structural perturbation in the bound
protein (i.e., denaturation), leading to functional impairment and disinfectant effects.
Therefore, based on the computational findings, P. aeruginosa (having
LecA) was chosen as a model SARS-CoV-2 mimic, and the ZnO sheet-like nanostructure was
selected as an antimicrobial agent for subsequent experimental validation.
Design of the Natural Cotton Fabric Functionalized with ZnO NF Featuring Flat
Sheet-like Petals
Encouraged by the in silico studies, we intended to decorate the natural
cotton fabric with flat ZnO sheet-like structures, which eventually self-assembled into
more complex rose-like ZnO NF during the hydrothermal-assisted low-temperature one-pot
synthesis process (detailed in the “Materials and
Methods” section). The scanning electron micrographs confirm the formation
of the flower-like morphology of ZnO on the surface of the cotton fiber (Figure a–d). Figure e–g shows the scanning electron micrographs of the bare cloth. The flat
sheet-like petals of the flower have a length of ∼600–850 nm and a diameter
of ∼150–300 nm with an aspect ratio of ∼3 (schematically represented
in Figure h). It should be noted that the
surface of the petals is not smooth, rather coated with small granules of nanoparticles.
Energy-dispersive X-ray analysis confirms the presence of ZnO in the nanostructure
(Figure S1). Elemental mapping confirmed the uniform distribution of ZnO NF
on the surface of the cotton matrix (Figure S2). Thermal gravimetric (TG)–differential thermal analysis
shows ∼9% (w/w) loading of ZnO NF to cellulose fibers (Figure S3).
Figure 3
of the developed ZnO NF-decorated cotton cloth at different magnifications.
(a–c) Low-magnification scanning electron micrograph of the ZnO NF-decorated
cotton cloth. (d) High-magnification SEM shows the self-assembled petal-like
structures of a single NF. (e–g) Scanning electron micrograph of the bare
cotton cloth showing the constituent cellulose fibers. (h) Schematic representation of
ZnO NF as observed under SEM.
of the developed ZnO NF-decorated cotton cloth at different magnifications.
(a–c) Low-magnification scanning electron micrograph of the ZnO NF-decorated
cotton cloth. (d) High-magnification SEM shows the self-assembled petal-like
structures of a single NF. (e–g) Scanning electron micrograph of the bare
cotton cloth showing the constituent cellulose fibers. (h) Schematic representation of
ZnO NF as observed under SEM.At the outset, we investigated the growth of the ZnO phase on the cotton clothes using
the XRD technique. With 5 h of intermediate growth time, the ZnO phase is not
distinguishable properly as the prominent XRD peaks are suppressed by the broad hump of
cellulose within the Bragg angle (2θ) range between 31 and 38° in Figure a. Nevertheless, the signature of the
⟨101⟩ plane of ZnO at ∼36.2° can be traced from the XRD pattern.
The growth of ZnO becomes quite dominant when the growth time is increased to 15 h. In
this case, the diffraction peaks appearing at 2θ of 31.8, 34.4, 36.1, 47.4, 56.6,
63.0, 68.0, and 69.2° represent the ⟨100⟩, ⟨002⟩,
⟨101⟩, ⟨102⟩, ⟨110⟩, ⟨103⟩,
⟨112⟩, and ⟨201⟩ planes of ZnO nanocrystals, respectively. The
observed peaks are in good agreement with those for hexagonal closed-packed ZnO having the
wurtzite structure [lattice constants a = 3.249, c =
5.206 Å; space group P63mc (186)] as
reported earlier (JCPDS 36-1451).[52] Sharp diffraction peaks indicate
good crystalline quality of the synthesized NFs, and the absence of any additional peak
directs toward the high purity of the material. The highly intensified peak at 36.1°
indicates the dominance of the ⟨101⟩ plane in the material.
Figure 4
Characterization of the ZnO NF-decorated cotton cloth. (a) XRD pattern of the ZnO
NF-decorated cotton cloth at different synthesis phases. (b) Transmission electron
micrograph of a single fully grown petal. The inset shows an SAED pattern of the ZnO
petal. (c) HRTEM image of a part of the petal indicated as a white box in (b). (d)
Corresponding FFT image. The (101) plane is indicated. (e) Reconstructed lattice image
from FFT. (f) Interplanar spacing plot shows a d-spacing of
∼0.25 nm.
Characterization of the ZnO NF-decorated cotton cloth. (a) XRD pattern of the ZnO
NF-decorated cotton cloth at different synthesis phases. (b) Transmission electron
micrograph of a single fully grown petal. The inset shows an SAED pattern of the ZnO
petal. (c) HRTEM image of a part of the petal indicated as a white box in (b). (d)
Corresponding FFT image. The (101) plane is indicated. (e) Reconstructed lattice image
from FFT. (f) Interplanar spacing plot shows a d-spacing of
∼0.25 nm.The transmission electron microscopy (TEM) image (Figure b) shows the size of a single ZnO NF petal to be ∼600 ×
300 nm. The high-resolution TEM (HRTEM) image taken at the center of the petal indicates
the presence of the ⟨101⟩ plane (Figure c). The presence of distinct bright spots in the selected area electron
diffraction (SAED) pattern (Figure d)
corresponds to the crystalline nature of the petals. Fast Fourier transformation (FFT)
shows that the crystallite is dominated by the ⟨101⟩ plane of ZnO, with a
lattice fringe spacing of 0.25 nm (Figure e,f).
Further, as shown in Figure a, the formation of
the nanorod-like morphology can be observed when the reaction time is reduced (i.e., 5 h).
The surface of the nanorods appears to be rough and can be originated from the presence of
a large number of crystallites. The SAED pattern shows small spots within the diffused
ring and reveals the polycrystallinity of the nanorods as each spot arises from the Bragg
reflection from individual crystallites (Figure a inset). The rings can be indexed as ⟨101⟩, ⟨102⟩,
and ⟨200⟩ of the wurtzite phase of ZnO, which exactly correlates with the
XRD pattern (Figure a). Next, a close look of
the nanorod at different locations (marked as c,d in Figure b) reveals the presence of the ⟨101⟩ and
⟨002⟩ planes of ZnO with interplanar spacings of ∼0.25 and 0.26 nm,
respectively (Figure c–g). The exhibition
of polycrystalline nature of the nanorods with various crystallites is different from
nanorods grown on crystalline surfaces (e.g., Si). Thus, it can be anticipated that the
use of the cotton substrate in the synthesis process plays a big role in forming nanorods
with exposed crystallites on the surface (Figure ). In fact, the functional groups present in the cellulose fibers act as
nucleation sites for the growth of nanorods (step 1 in Figure ). It can be noted that in HMT-based hydrothermal synthesis,
Zn(OH)2 acts as the nucleation agent according to the following
equations:[53]or
Figure 5
TEM image of the ZnO NF petal at an intermediate growth time (5 h). (a) TEM of a
single growing petal. The inset shows the SAED pattern of the growing petal. (b) HRTEM
of the petal. (c,d) Corresponding FFT image from different areas indicated as a white
box in (b). The (101) and (002) planes are indicated. (e–g) Reconstructed
lattice image from FFT shows the fringe pattern and d-spacing.
Figure 6
Schematic representation of the different phases of ZnO nanoflower growth on the
cotton cloth constituted with cellulose fibers. The numbers (1–5) indicate
different steps of the growth. See the text for details.
TEM image of the ZnO NF petal at an intermediate growth time (5 h). (a) TEM of a
single growing petal. The inset shows the SAED pattern of the growing petal. (b) HRTEM
of the petal. (c,d) Corresponding FFT image from different areas indicated as a white
box in (b). The (101) and (002) planes are indicated. (e–g) Reconstructed
lattice image from FFT shows the fringe pattern and d-spacing.Schematic representation of the different phases of ZnO nanoflower growth on the
cotton cloth constituted with cellulose fibers. The numbers (1–5) indicate
different steps of the growth. See the text for details.In the present investigation, the abundant and random distribution of these functional
groups based nucleation sites on the cellulose fiber surface provides a continuous
platform for ZnO growth along the direction of fibers (step 1 in Figure
). As the nucleation and the subsequent growth process occur
on the outer circumference of the cellulose fibers, the fiber plays the role of a template
to form a nanorod-like one-dimensional structure (step 2 in Figure ). Now, the random distribution of the functional groups leads to
the randomly oriented nucleation sites, and consequently, the growth is evident to be
different in different directions. The observation of the rough surface with different
crystallites of the ⟨101⟩ and ⟨002⟩ planes is the consequence
of such a growth process.It is worth mentioning here that the method used to functionalize the cotton fibers is
widely applicable to other substrates. Similar strategies were used to functionalize glass
and nylon fishing nets previously.[54,55] However, in both the cases, distinct nanorods were formed instead of
NF, which may be due to the more oriented distribution of the surface functional groups.
Also, from our understanding, the size of the cotton fibers will not impact the
fabrication results. However, the type of functional groups may have an impact on the
fabrication process, which needs to be explored in future with greater detail.Now, it is well established that in ZnO crystals, the surface energy (per mole) varies
with the direction as γ[0001] < γ[11-20] <
γ[10-10].[56] Hence, the growth of the
⟨002⟩ plane along the [0001] direction is highly favorable from a
thermodynamic point of view. Thus, the nanorods with exposed ⟨002⟩ planes
offer chances for further growth. As a result, with increased reaction time, the nanorods
suffer two-dimensional growth, that is, along horizontal as well as vertical directions to
the surface of the fiber, leading to the development of petal-like features (step 4 in
Figure ). To ensure this fact, TEM analysis
has been performed on four different edges of the fully grown petal. In none of these
areas, any signature of the ⟨002⟩ plane has been found. It is well known
that a plane with a higher growth rate disappears quickly.[57] Thus, the
disappearance of the ⟨002⟩ plane confirms the speculated lateral growth of
the nanorods to form the petals. Subsequent self-assembly of such petal-like features
leads to the formation of a flower-like morphology of ZnO at a higher reaction time (step
5 in Figure ).Figure a shows the absorbance spectrum recorded
from bare cotton cloths and ZnO NF decorated cotton cloths. As the constituent of the
cotton fiber is cellulose, the observed absorption bands at 200–220 and
270–290 nm could be assigned to oxidized xylans and monocarboxyl celluloses due to
the presence of carboxyl and carbonyl groups, respectively.[58]
Furthermore, the absorption bands at 230–250 and 290–320 nm could be
assigned to heteroaromatics of the furan and pyron types, respectively, and the
low-intensity absorption shoulder above 300 nm to conjugated heteroaromatics.[58] Functionalization with ZnO NF leads to the appearance of the
characteristic ZnO absorption edge at 365 nm which is blue-shifted by 8 nm relative to the
bulk exciton absorption (373 nm).[59] Correspondingly, ZnO NF exhibited a
slightly higher optical energy gap (Eg) of 3.44 eV with
respect to bulk ZnO (3.37 eV) (Figure a inset).
The slight change in the absorption edge and Eg can be well
explained by the oriented attachment of multiple ZnO nanorods in the flower-like
morphology.[59,60]
Figure 7
Spectroscopic characterization of the ZnO NF-decorated cotton cloth. (a)
UV–vis absorbance spectra of the ZnO NF-decorated cotton cloth and the bare
cotton cloth. The inset shows Tauc’s plots for determination of the band gap
energy. (b) Steady-state fluorescence emission spectra show quenching of cotton cloth
fluorescence (originating from the constituent cellulose) upon ZnO NF decoration. The
inset shows the corresponding change in fluorescence excitation spectra. (c,d)
Picosecond-resolved transients show quenching of fluorescence lifetime of the
constituent cellulose by ZnO NF at longer wavelengths.
Spectroscopic characterization of the ZnO NF-decorated cotton cloth. (a)
UV–vis absorbance spectra of the ZnO NF-decorated cotton cloth and the bare
cotton cloth. The inset shows Tauc’s plots for determination of the band gap
energy. (b) Steady-state fluorescence emission spectra show quenching of cotton cloth
fluorescence (originating from the constituent cellulose) upon ZnO NF decoration. The
inset shows the corresponding change in fluorescence excitation spectra. (c,d)
Picosecond-resolved transients show quenching of fluorescence lifetime of the
constituent cellulose by ZnO NF at longer wavelengths.The fluorescence emission spectra of the cotton cloth in the solid state (Figure b) show an intense peak around 430 nm and a
broad shoulder ranging from 470 to 560 nm when excited at 375 nm. The observed emission
pattern of the cotton cloth exactly matches to the previously reported photoluminescence
characteristics of cellulose fibers.[58,61] Gavrilov and Ermolenko (1966),[62] who
studied photoluminescence of cellulose in great detail, have suggested that the broad
emission band of cellulose originates from three different types of excitation centers.
The presence of multiple excitation maxima (i.e., 265, 350, and 390 nm) in the excitation
spectra of the bare cotton cloth (Figure b
inset) further supports their findings. Functionalization with ZnO NF significantly
quenched the emission of the cellulose constituent (Figure b), which indicates possible interactions between ZnO NF and
cellulose fibers. The observed increase in the λem 410
nm/λem 450 nm ratio could be due to a possible interaction between the
Zn-vacancy state of ZnO NF and the OH groups of cellulose fibers
(O=C–O–Zn) as previous studies suggest that the presence of
carboxylic groups in the anhydroglucose units shifts the emission maxima of cellulose to
shorter wavelengths (blue shift).[58,61,63] A detailed computational study (i.e.,
molecular docking) further supports the strong binding of ZnO NF with the cellulose fiber,
mostly through hydrogen bonding. The calculated binding energies per unit area of the
cellulose fiber with different facets of the ZnO nanostructure were found to be −21
kcal mol–1 nm–2 (sphere), −43 kcal
mol–1 nm–2 [⟨002⟩ facet], −41
kcal mol–1 nm–2 [⟨100⟩ and
⟨110⟩ facets], and −39 kcal mol–1
nm–2 [⟨101⟩ facet] (Figure S4). The highly negative binding energies indicate stronger
attachment between the cellulose fiber and ZnO NF.To get further insight into the quenching mechanism, we studied the excited-state
fluorescence lifetime of cellulose (i.e., cotton cloth) and ZnO NF-decorated cellulose.
Interestingly, the fluorescence lifetime of both the samples remained unchanged at 450 nm
(λex 375 nm) (Figure c),
while a decrease was observed at 550 nm (λex 375 nm) upon ZnO NF
decoration (Figure d). This could well be
interpreted by the existence of several luminescent centers (originating from the presence
of conjugated chromophores of various origins) in the cellulose.[62] One
possible mechanism behind the observed decrease in the fluorescence lifetime of ZnO
NF-decorated cellulose could be due to the photoinduced electron transfer from the lowest
unoccupied molecular orbital level of the low-energy excitation centers (near the red end)
of cellulose to the conduction band of ZnO, resulting in the luminescence quenching of
cellulose.[64] The presence of a very fast component (i.e., 25 ps) in
the excited-state lifetime decay of ZnO NF-decorated cellulose further supports our
conjecture. In contrast, due to the mismatch in the energy levels, the high-energy
excitation centers (near the blue end) of cellulose cannot undergo such electron or energy
transfers. The quenching in this region is static in nature and may be originated due to
ground-state interactions between ZnO NF and cellulose which we explained in the earlier
section. In summary, the results of our optical studies confirm the attachment of ZnO NF
to the cellulose fibers of the cotton cloth.
Antimicrobial Activity of the ZnO NF-Functionalized Cotton Fabric
The antimicrobial activity of the ZnO NF-decorated cotton fabric was evaluated against
the SARS-CoV-2 mimic pathogenic capsule containing (having LecA, the mimic of viral spike
protein; vide computational studies in the earlier section) Gram-negative
model bacteria P. aeruginosa. To directly assess the antimicrobial
effect, after 1 h of incubation (in the dark, 37 °C) over the ZnO NF-decorated cotton
cloth and bare cotton cloth, P. aeruginosa was transferred and cultured
on a Luria–Bertani (LB) agar medium (i.e., the plate count assay) for 12 h (at 37
°C). The original bacterial inoculum, which was employed over the fabrics for initial
incubation, served as a control. As shown in the photographs of the agar plates after 12 h
(Figure a), a clear killing activity was
observed in the case of the ZnO NF-functionalized cotton fabric resulting into very few
colonies. Colony count shows (Figure b) that in
the ZnO NF-functionalized cotton fabric, the bacterial growth was ∼79% lower
compared to the control [P < 0.0001; F(2,15) = 303.2,
one-way analysis of variance (ANOVA)] and ∼54% lower compared to the bare cotton
fabric [P < 0.0001; F(2,15) = 303.2, one-way
ANOVA].
Figure 8
Antimicrobial activity of the ZnO NF-decorated cotton fabric on P.
aeruginosa, a mimic of SARS-CoV-2. (a) Digital photographs of P.
aeruginosa colonies on the agar plate after treatment with the ZnO
NF-decorated cotton cloth and the bare cotton cloth. (b) Bacterial cell count after 12
h of incubation. (c) Growth pattern of P. aeruginosa treated with the
ZnO NF-decorated and bare cotton cloths. The inset shows relative growth rates.
(d–f) Micrographs of bacteria after DAPI-PI differential staining. (g)
Corresponding ratio of live vs dead cells.
Antimicrobial activity of the ZnO NF-decorated cotton fabric on P.
aeruginosa, a mimic of SARS-CoV-2. (a) Digital photographs of P.
aeruginosa colonies on the agar plate after treatment with the ZnO
NF-decorated cotton cloth and the bare cotton cloth. (b) Bacterial cell count after 12
h of incubation. (c) Growth pattern of P. aeruginosa treated with the
ZnO NF-decorated and bare cotton cloths. The inset shows relative growth rates.
(d–f) Micrographs of bacteria after DAPI-PI differential staining. (g)
Corresponding ratio of live vs dead cells.Further, the antibacterial effect of the ZnO NF-decorated cotton cloth on the P.
aeruginosa growth kinetics was evaluated in liquid LB media. The bacterial
growth was monitored by the measurement of the optical density at 600 nm
(OD600) as a reflection of the bacterial concentration in the culture. After 1
h of incubation over the respective fabrics (inoculation at 1 × 106
CFU/mL), we started monitoring the growth kinetics. The original bacterial inoculum, which
was employed over the fabrics for initial incubation, served as a control. Figure c clearly indicates that the ZnO NF-decorated
cotton cloth caused complete inhibition of growth and this was even continued for 14 h.
The bare cotton cloth also showed a weaker growth inhibition. The growth rate was
∼10 times lower in the case of the ZnO NF-functionalized cotton fabric compared to
both the control [P < 0.0001; F(2,15) = 1062, one-way
ANOVA] and bare cotton fabric [P < 0.0001; F(2,15) =
1062, one-way ANOVA] (Figure c inset).Our computational studies have suggested that ZnO NF can simultaneously bind and denature
P. aeruginosa LecA (SARS-CoV-2 spike protein mimic), resulting into
disruption of the bacterial cell membrane, which eventually is responsible for the
observed antimicrobial activity. In order to confirm that ZnO NF disrupts the bacterial
membrane, P. aeruginosa cells were treated with PI after incubation with
the ZnO NF-decorated cotton fabric. It is worth mentioning here that PI is a
small-molecule dye that upon binding to double-stranded DNA fluoresces red upon
excitation, and it cannot cross an intact cytoplasmic membrane.[65,66] We expected that ZnO NF-induced
membrane disruption would lead to an increase in nucleic acid staining by PI compared to
that of the control or bare cotton cloth-treated ones. As shown in Figure
d,e, control bacteria as well as bacteria incubated with the
bare cotton fabric remained unstained to PI. In comparison, intracellular PI staining was
clearly visible in cultures exposed to the ZnO NF-decorated cotton fabric (Figure f). We further evaluated the number of viable
cells using differential staining with DAPI and PI. As discussed earlier, PI generally
stains the membrane-disrupted cells, whereas DAPI stains all nuclear materials
irrespective of their viability. The differentially stained images of control and cotton
fabric-inoculated bacteria show more number of viable cells than dead cells (ratio
∼ 1.2) (Figure g). In contrast, the
number of living cells was significantly reduced in the case of the ZnO NF-functionalized
cotton fabric (∼0.45) (Figure g).Next, we investigated the antimicrobial ability of the ZnO NF-decorated cotton fabric
toward Gram-positive bacteria Staphylococcus aureus. The results of the
plate count assay showed the antimicrobial activity to be significant but lower compared
to P. aeruginosa (Figure S5), which may be due to the absence of the S-protein mimic in
S. aureus.In one of the recent studies, it was observed that the nanoparticles having an anionic
surface showed lower antialgal and antiyeast activity compared to those having a cationic
surface.[67] The probable explanation could be the poor adhesion of
anionic particles to the microbial cell membranes (anionic in nature) due to electrostatic
repulsion.[67] However, the particle–cell membrane electrostatic
adhesion in the case of cationic nanoparticles leads to enhanced antiyeast and antialgal
action.[67] As hydrothermally produced ZnO has a positive surface
charge and P. aeruginosa has a negative surface charge, there is a
possibility that the bacteria bind to NF predominantly through electrostatic interactions
between bacterial glycolipids and NF. Therefore, in order to understand the role of
charge–charge interactions in the antimicrobial activity, we have decorated the
cellulose fiber of the cloth with positively charged poly-l-lysine and repeated
the antimicrobial experiment (i.e., the plate count assay). The results show a marginal
decrease (∼12%) in the bacterial count in the poly-l-lysine coated cloth
compared to the control (Figure S6). Thus, although the charge–charge interaction may play a
role in the binding of P. aeruginosa to ZnO nanocrystals, the
antimicrobial activity is predominantly due to the binding and subsequent denaturation of
SARS-CoV-2 spike protein-mimicking protein of P. aeruginosa.Next, we performed a computer simulation study to understand whether the filtration
effect is due to the RBD mimic adsorbing to the ZnO crystals or due to some other blockade
by the protrusions of the fibers and their new ZnO decoration. Particle (i.e., the
microbe) flow through the cellulose fiber mesh was simulated using laminar flow and
particle tracing algorithms as implemented in COMSOL multiphysics software. A simplified
two-dimensional model of the cellulose fiber mesh (with ∼10 μm pores) was
built as depicted in Figure S7a, and the particle flow was studied through this mesh under normal
exhalation conditions (videMaterials and Methods section for details of the parameters used;
Figure S7b). ZnO deposition on the cellulose fiber slightly increased the
diameters of such fibers (Figure a,b,e,f), which
was ignored in the simulation. In this regard, it has to be noted that the sizes of the
microbes are much smaller (∼0.05–0.5 μm) compared to the pores.
Particle penetration ability up to 100 μm of the cellulose fiber mesh was studied
varying the sticking probability (i.e., the affinity) from 0.1 to 1 (per collision), and
it was found that penetration ability decreases exponentially with the increase in
sticking probability (Figure S7e). As evident from our microbial experiments, the sticking
probability of the bare cotton cloth is very low (∼10% or ∼0.1). The
simulation results show that with a sticking probability of 0.1, 20 layers of the fabric
are required to trap ∼98% of the particles. However, Figure shows the alterations are of only 1–2 layers. On the
contrary, molecular docking showed that binding free energy of SARS-CoV-2 RBD on the
⟨101⟩ facet of ZnO is −29 kcal/mol, indicating a very high binding
affinity with a large equilibrium constant [1.82 × 1021 as obtained from
ΔG = −R × T ×
ln(keq) equation]. Such a large
keq suggests that almost all the particles remain bound and
the sticking probability is close to 1. The simulation results demonstrate that even with
a 90% sticking probability, all the particles got trapped within the first few layers of
the cellulose fiber mesh (Figure S7e,f; Videos S1 and S2). Thus, the bare fibers or fiber protrusions alone cannot stop the spread
of the microbe, while the ZnO-covered regions can instantly trap them due to their high
binding affinity. Moreover, the bare fibers have not shown significant antimicrobial
activity in our experiments. Therefore, the antimicrobial activity as depicted by the ZnO
NF-fabricated cotton cloths is predominantly due to the attachment and subsequent
denaturation of the spike-protein mimic by the ZnO surface.Thus, our antimicrobial studies experimentally provide evidence that ZnO NF can induce
membrane damage, resulting into a loss of membrane potential leading to inhibition of PI
staining. It further depicts that ZnO NF is an effective antimicrobial agent particularly
against SARS-CoV-2-mimicking microorganisms.
Washability and Reusability of the ZnO NF-Functionalized Cotton Fabric
For regular use as an antimicrobial hospital dress material (or PPE), washability and
reusability of the fabric are the two major factors. To address this issue, we have washed
the fabric material with a mild detergent as well as with a harsh detergent in tap water.
Even after 50 washes with the mild detergent and 10 washes with the harsh detergent, the
ZnO NF coating of the cotton fibers remained almost intact as observed under SEM
(Figure S8). The antibacterial activity was also sustained in both the cases
as compared to the original ZnO NF-functionalized fabric (Figure S9). Therefore, the ZnO NF-functionalized cotton fabric was found to
be highly reusable with sufficient washability.
Conclusions
In conclusion, we successfully functionalized the commonly available cotton fabrics with
ZnO NFs. The ZnO NF-functionalized cotton fabrics showed significant antimicrobial
activities against the SARS-Cov-2 mimic model pathogenic microorganism as depicted in our
detailed antimicrobial assays. The ZnO NFs were able to destroy the microbial membrane
leading to inhibition of infection. A detailed computational study along with in
vitro studies using viral spike protein-mimicking protein and bacteria showed the
trapping ability of the fabric. As a proof of concept, we designed a laboratory-grade
prototype respirator for using in common N95 masks using the ZnO NF-functionalized cotton
fabrics. The porous respirator helped to solve the problem of CO2 rebreathing and
prevented spread of microbes through the pores. The ZnO NF-functionalized cotton fabrics can
further be used to design comfortable, washable antimicrobial PPE, which is an urgent need
of today.
Materials and Methods
Synthesis of the ZnO NF-Functionalized Cotton Cloth (Patent Ref. No.
202031038152)
Zinc nitrate hexahydrate [Zn(NO3)2, 6H2O; Sigma-Aldrich]
and hexamethylenetetramine (C6H12N4; Aldrich) were used
as the starting materials for a low-temperature hydrothermal synthesis of ZnO NFs on the
cotton fiber matrix.For the synthesis of the ZnO-functionalized cotton cloth, at first, seed layer ZnO
nanoparticles of ∼5 nm in size were prepared in ethanol. In a typical synthesis
process, to a 2 mM zinc acetate [Zn(CH3COO)2·2H2O;
20 mL in ethanol] solution heated at 55 °C, 4 mM sodium hydroxide (NaOH) solution (20
mL of ethanol) was dropwise added under continuous stirring conditions. The glass beaker
was then covered tightly with aluminum foil and heated at 65 °C for 2 h with
continuous stirring. After 2 h, the resultant transparent ZnO nanoparticle colloidal
solution (seeding material) was allowed to cool down to room temperature and stored in a
refrigerator for further use.For seeding of the 5 nm ZnO particles on the cotton cloth, the cloths (3 cm × 3 cm)
were dipped into the seeding solution for 10 min and then dried into a hot oven operating
at 95 °C for 10 min. The procedure was repeated 11 times. Then, the cloth was
transferred to an autoclave vessel. An aqueous solution of zinc nitrate (20 mM) and
hexamethylenetetramine (20 mM) was used as the precursor solution for the ZnO NF growth,
which was carried out at 102 °C for 15 h. This led to the growth of ZnO NFs with a
length of ∼600–850 nm and a diameter of ∼150–300 nm. To
maintain a constant growth rate of the ZnO NFs during the hydrothermal process, the old
precursor solution was replaced with a fresh solution every 5 h. The as-obtained ZnO NF
samples were then taken out of the reaction vessel and rinsed thoroughly with DI water to
remove unreacted residues. Finally, the samples were annealed in air at ∼110
°C for 3 h prior to the study.
Characterization Methods
Field emission SEM (QUANTA FEG 250) was used to investigate the surface morphology of the
samples. TEM was carried out using an FEI (Technai S-Twin) instrument with an acceleration
voltage of 200 kV. A drop of the sample (obtained by scratching the ZnO NF-decorated
cotton cloth) was placed on a carbon-coated copper grid, and particle sizes were
determined from micrographs recorded at a high magnification of 100,000×. XRD was
used to characterize the crystal phase using a PANalytical X’Pert Pro
diffractometer equipped with Cu Kα radiation (at 40 mA and 40 kV) at a scanning rate
of 0.02° S–1 in the 2θ range from 20 to 80°. TG analysis
(TGA) of PDPB, PDPB–ZnO, and ZnO solid powder was performed under a nitrogen
atmosphere with a heating rate of 10 °C-min from 30 to 600 °C by using a
PerkinElmer TGA-50H. For optical experiments, the steady-state absorption and emission
were recorded with a JASCO V-750 spectrophotometer and a JASCO FP-8200 fluorimeter,
respectively. Picosecond-resolved spectroscopic studies were carried out using a
commercial time correlated single-photon counting setup from Edinburgh Instruments
(instrument response function, IRF = 82 ps, excitation at 375 nm). The details of the
experimental setup and methodology were described in our earlier report.[68] The average lifetime (amplitude-weighted) of a multiexponential decay is
expressed
as
Computational Study
Binding Study
The optimized orthorhombic ZnO wurtzite unit cell (a = 5.63,
b = 3.25, and c = 5.21) with eight atoms was taken
to build a large supercell. For binding calculations on the ⟨002⟩,
⟨100⟩, and ⟨101⟩ facets, slabs of atoms with the exposed
⟨002⟩, ⟨100⟩, and ⟨101⟩ phases, respectively,
were cut out of the bulk (supercell). For the calculation with a nanosphere, a sphere of
a radius of 15 Å was cut out from the bulk and then appropriate surface atoms were
removed to make it stoichiometrically neutral. The ACE2-bound SARS-CoV-2 spike protein
structure (PDB ID: 6LZG) was
obtained from the Protein Data Bank (PDB). ACE2 protein was removed before docking with
the nanostructures. The structure of the lectin protein (PDB ID: 4YWA) of P. aeruginosa
was also obtained from PDB. Molecular docking was performed using AutoDock Vina[39] following a previously published protocol.[40] The
docked structures were energy-minimized under OPLS using the Desmond molecular dynamics
program[41] as implemented in Schrodinger Maestro (academic release
2018-4), followed by rescoring with AutoDock Vina. Changes in the atomic positions of
the protein backbone after minimization were computed in terms of rmsd.
Sequence Analysis
The sequence of the cell surface adhesion lectin protein lecA of P.
aeruginosa was obtained from the PDB (PDB ID: 4YWA). The structure and sequence of the RBD of SARS-CoV-2
were also obtained from the PDB (ID: 6LZG). Sequence alignment was performed using Clustal Omega[69] with no end gap penalty. Local alignments were performed with
LALIGN.[70] Similar amino acids in the binding sites of the two
proteins are mapped using PyMOL molecular graphics software.
Multiphysics Simulation
Particle (i.e., microbe) flow through the cotton mesh was simulated using laminar flow
and particle tracing modules of COMSOL. A two-dimensional periodic model of the mesh was
constructed as depicted in Figure S7a. The fiber diameter in the model is 10 μm, and the
separation between fibers is also kept at 10 μm (videFigure e–g). The velocity of exhaled
air for laminar flow was 5.66 m s–1. Considering the size of bacteria,
viruses, and respiratory droplets (e.g., the SARS-CoV-2 diameter was 0.05–0.2
μm, the bacterium diameter was typically 0.5–5.0 μm; the respiratory
droplet size during normal breathing was ∼1 μm), the particle size and
density used were 1 μm and 1.1 g cm3, respectively.[71] Particles move in the air velocity field (Figure S7b). On collision with a fiber, a particle either sticks to it or
gets scattered. The probability of the particle sticking to the fibrils was set
according to the binding energies with ZnO facets and cellulose fibrils. The simulation
time was 0.1 s. The increase in the thickness of cellulose fibers due to ZnO deposition
as seen in Figure a,b was ignored in the
simulation.
Antibacterial Tests
The bacterial strains of Gram-negative P. aeruginosa and Gram-positive
S. aureus as used in this study were obtained from Dey’s Medical
Stores Mfg. Ltd., Kolkata, India. The glassware, suction nozzles, and culture medium were
sterilized in an autoclave at a high pressure of 0.1 MPa and a temperature of 120 °C
for 30 min before experiments. Bacteria cultures were cultivated in a sterilized LB broth
(Himedia, India), and incubation was done at 37 °C with a shaking incubator for 24
h.The colony count method was used to estimate antibacterial properties through the
concentration of the survival colony bacteria in co-cultured solution. First, original
bacterial suspensions were washed three times with phosphate-buffered saline (PBS; pH 7.4)
solution to a concentration of 108 CFU/mL. Then, they were poured onto the ZnO
NF-functionalized cotton fabric and incubated for 1 h. Third, the incubated bacterial
solution was diluted five times to a certain concentration. The resulting bacterial PBS
suspensions (100 μL) were spread on gelatinous LB agar plates, culturing at 37
°C for 24 h. The number of survival colonies was counted manually. For growth curve
analysis, the bacterial solution which was diluted five times was added to LB and kept at
37 °C. 600 nm absorbance (or optical density; OD600) was monitored at
regular intervals (1 h) to assess the growth kinetics.The bacteria cells after proper incubation with the ZnO NF-functionalized cotton fabric
were stained with DAPI and PI. The DAPI stains all cells, while PI only stains the
membrane-disrupted cells. The ratio was obtained to assess the survivality of P.
aeruginosa. Non-functionalized cotton cloths and untreated bacterial cultures
were used as controls in all the tests. All tests were repeated at least six times.To rule out the role of charge–charge interactions in the antimicrobial effect, we
coated the cotton fabric with positively charged poly-l-lysine and performed the
plate count experiment with P. aeruginosa, following the procedure
described above.
Statistics
Data are represented as the mean ± standard deviation unless otherwise stated.
One-way ANOVA, followed by Tukey’s post hoc test, was used to calculate differences
between groups. P < 0.05 was considered significant. For all
statistical tests, GraphPad Prism (v8.0) software was used.
Authors: R K Dutta; Bhavani P Nenavathu; Mahesh K Gangishetty; A V R Reddy Journal: Colloids Surf B Biointerfaces Date: 2012-02-07 Impact factor: 5.268
Authors: Markus Hoffmann; Hannah Kleine-Weber; Simon Schroeder; Nadine Krüger; Tanja Herrler; Sandra Erichsen; Tobias S Schiergens; Georg Herrler; Nai-Huei Wu; Andreas Nitsche; Marcel A Müller; Christian Drosten; Stefan Pöhlmann Journal: Cell Date: 2020-03-05 Impact factor: 41.582
Authors: Arno R Bourgonje; Amaal E Abdulle; Wim Timens; Jan-Luuk Hillebrands; Gerjan J Navis; Sanne J Gordijn; Marieke C Bolling; Gerard Dijkstra; Adriaan A Voors; Albert Dme Osterhaus; Peter Hj van der Voort; Douwe J Mulder; Harry van Goor Journal: J Pathol Date: 2020-06-10 Impact factor: 9.883