Literature DB >> 35003829

Engineering P450 TamI as an Iterative Biocatalyst for Selective Late-Stage C-H Functionalization and Epoxidation of Tirandamycin Antibiotics.

Rosa V Espinoza1, Kersti Caddell Haatveit2, S Wald Grossman3, Jin Yi Tan3, Caylie A McGlade3, Yogan Khatri3, Sean A Newmister3, Jennifer J Schmidt3, Marc Garcia-Borràs2, John Montgomery4, K N Houk2, David H Sherman5.   

Abstract

Iterative P450 enzymes are powerful biocatalysts for selective late-stage C-H oxidation of complex natural product scaffolds. These enzymes represent useful tools for selectivity and cascade reactions, facilitating direct access to core structure diversification. Recently, we reported the structure of the multifunctional bacterial P450 TamI and elucidated the molecular basis of its substrate binding and strict reaction sequence at distinct carbon atoms of the substrate. Here, we report the design and characterization of a toolbox of TamI biocatalysts, generated by mutations at Leu101, Leu244, and/or Leu295, that alter the native selectivity, step sequence, and number of reactions catalyzed, including the engineering of a variant capable of catalyzing a four-step oxidative cascade without the assistance of the flavoprotein and oxidative partner TamL. The tuned enzymes override inherent substrate reactivity, enabling catalyst-controlled C-H functionalization and alkene epoxidation of the tetramic acid-containing natural product tirandamycin. Five bioactive tirandamycin derivatives (6-10) were generated through TamI-mediated enzymatic synthesis. Quantum mechanics calculations and MD simulations provide important insights into the basis of altered selectivity and underlying biocatalytic mechanisms for enhanced continuous oxidation of the iterative P450 TamI.

Entities:  

Keywords:  C–H functionalization; antibiotics; biocatalysis; cytochrome P450; enzyme engineering; natural products

Year:  2021        PMID: 35003829      PMCID: PMC8739753          DOI: 10.1021/acscatal.1c01460

Source DB:  PubMed          Journal:  ACS Catal            Impact factor:   13.084


  34 in total

1.  Functional analysis of MycCI and MycG, cytochrome P450 enzymes involved in biosynthesis of mycinamicin macrolide antibiotics.

Authors:  Yojiro Anzai; Shengying Li; Mani Raj Chaulagain; Kenji Kinoshita; Fumio Kato; John Montgomery; David H Sherman
Journal:  Chem Biol       Date:  2008-09-22

2.  Tirandamycin, a new antibiotic isolation and characterization.

Authors:  C E Meyer
Journal:  J Antibiot (Tokyo)       Date:  1971-08       Impact factor: 2.649

3.  Substrate Recognition by a Dual-Function P450 Monooxygenase GfsF Involved in FD-891 Biosynthesis.

Authors:  Akimasa Miyanaga; Ryuichi Takayanagi; Takashi Furuya; Ayano Kawamata; Tomohiro Itagaki; Yoshiharu Iwabuchi; Naoki Kanoh; Fumitaka Kudo; Tadashi Eguchi
Journal:  Chembiochem       Date:  2017-09-18       Impact factor: 3.164

Review 4.  Diversity of P450 enzymes in the biosynthesis of natural products.

Authors:  Larissa M Podust; David H Sherman
Journal:  Nat Prod Rep       Date:  2012-07-23       Impact factor: 13.423

5.  Chemoenzymatic Total Synthesis and Structural Diversification of Tylactone-Based Macrolide Antibiotics through Late-Stage Polyketide Assembly, Tailoring, and C-H Functionalization.

Authors:  Andrew N Lowell; Matthew D DeMars; Samuel T Slocum; Fengan Yu; Krithika Anand; Joseph A Chemler; Nisha Korakavi; Jennifer K Priessnitz; Sung Ryeol Park; Aaron A Koch; Pamela J Schultz; David H Sherman
Journal:  J Am Chem Soc       Date:  2017-06-05       Impact factor: 15.419

Review 6.  If C-H bonds could talk: selective C-H bond oxidation.

Authors:  Timothy Newhouse; Phil S Baran
Journal:  Angew Chem Int Ed Engl       Date:  2011-03-16       Impact factor: 15.336

7.  Isolation and characterization of tirandamycins from a marine-derived Streptomyces sp.

Authors:  Jacob C Carlson; Shengying Li; Douglas A Burr; David H Sherman
Journal:  J Nat Prod       Date:  2009-11       Impact factor: 4.050

Review 8.  Hydrocarbon hydroxylation by cytochrome P450 enzymes.

Authors:  Paul R Ortiz de Montellano
Journal:  Chem Rev       Date:  2010-02-10       Impact factor: 60.622

9.  Unified synthesis of tirandamycins and streptolydigins.

Authors:  Hikaru Yoshimura; Keisuke Takahashi; Jun Ishihara; Susumi Hatakeyama
Journal:  Chem Commun (Camb)       Date:  2015-12-11       Impact factor: 6.222

10.  Asparaginyl-tRNA Synthetase, a Novel Component of Hippo Signaling, Binds to Salvador and Enhances Yorkie-Mediated Tumorigenesis.

Authors:  Eunbyul Yeom; Dae-Woo Kwon; Jaemin Lee; Seok-Ho Kim; Ji-Hyeon Lee; Kyung-Jin Min; Kyu-Sun Lee; Kweon Yu
Journal:  Front Cell Dev Biol       Date:  2020-02-05
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  3 in total

Review 1.  Recent Advances in Biocatalysis for Drug Synthesis.

Authors:  Alina Kinner; Philipp Nerke; Regine Siedentop; Till Steinmetz; Thomas Classen; Katrin Rosenthal; Markus Nett; Jörg Pietruszka; Stephan Lütz
Journal:  Biomedicines       Date:  2022-04-21

2.  Co-Crystal Structure-Guided Optimization of Dual-Functional Small Molecules for Improving the Peroxygenase Activity of Cytochrome P450BM3.

Authors:  Xiangquan Qin; Yiping Jiang; Jie Chen; Fuquan Yao; Panxia Zhao; Longyi Jin; Zhiqi Cong
Journal:  Int J Mol Sci       Date:  2022-07-18       Impact factor: 6.208

Review 3.  Oxygenating Biocatalysts for Hydroxyl Functionalisation in Drug Discovery and Development.

Authors:  Sacha N Charlton; Martin A Hayes
Journal:  ChemMedChem       Date:  2022-05-02       Impact factor: 3.540

  3 in total

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