Literature DB >> 35000005

"Yaraviridae": a proposed new family of viruses infecting Acanthamoeba castellanii.

Paulo Victor de Miranda Boratto1, Graziele Pereira Oliveira1, Jônatas Santos Abrahão2.   

Abstract

Here, we propose the creation of the family "Yaraviridae", a new taxon to classify a virus infecting Acanthamoeba castellanii cells. Recently, we described the discovery of a new virus infecting free-living amoebae, yaravirus, which has features that strongly differ from those of all other viruses of amoebae described to date. Yaravirus particles are about 80 nm in diameter and have a dsDNA genome of ~45 kbp containing 74 ORFs, most of which (>90%) have no homologs in current databases. Together, these data support the creation of a new species ("Yaravirus brasiliense"), a new viral genus (here proposed as "Yaravirus"), and a new viral family (here proposed as "Yaraviridae") to classify yaravirus and other related viruses that may be described in the future. All of them are to be included into the existing realm Varidnaviria and the kingdom Bamfordvirae, due to the presence of a major capsid protein containing a double jelly-roll fold.
© 2021. The Author(s), under exclusive licence to Springer-Verlag GmbH Austria, part of Springer Nature.

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Year:  2022        PMID: 35000005     DOI: 10.1007/s00705-021-05326-1

Source DB:  PubMed          Journal:  Arch Virol        ISSN: 0304-8608            Impact factor:   2.574


  9 in total

1.  A giant virus in amoebae.

Authors:  Bernard La Scola; Stéphane Audic; Catherine Robert; Liang Jungang; Xavier de Lamballerie; Michel Drancourt; Richard Birtles; Jean-Michel Claverie; Didier Raoult
Journal:  Science       Date:  2003-03-28       Impact factor: 47.728

2.  Pandoraviruses: amoeba viruses with genomes up to 2.5 Mb reaching that of parasitic eukaryotes.

Authors:  Nadège Philippe; Matthieu Legendre; Gabriel Doutre; Yohann Couté; Olivier Poirot; Magali Lescot; Defne Arslan; Virginie Seltzer; Lionel Bertaux; Christophe Bruley; Jérome Garin; Jean-Michel Claverie; Chantal Abergel
Journal:  Science       Date:  2013-07-19       Impact factor: 47.728

3.  Giant Marseillevirus highlights the role of amoebae as a melting pot in emergence of chimeric microorganisms.

Authors:  Mickaël Boyer; Natalya Yutin; Isabelle Pagnier; Lina Barrassi; Ghislain Fournous; Leon Espinosa; Catherine Robert; Saïd Azza; Siyang Sun; Michael G Rossmann; Marie Suzan-Monti; Bernard La Scola; Eugene V Koonin; Didier Raoult
Journal:  Proc Natl Acad Sci U S A       Date:  2009-12-09       Impact factor: 11.205

4.  Yaravirus: A novel 80-nm virus infecting Acanthamoeba castellanii.

Authors:  Paulo V M Boratto; Graziele P Oliveira; Talita B Machado; Ana Cláudia S P Andrade; Jean-Pierre Baudoin; Thomas Klose; Frederik Schulz; Saïd Azza; Philippe Decloquement; Eric Chabrière; Philippe Colson; Anthony Levasseur; Bernard La Scola; Jônatas S Abrahão
Journal:  Proc Natl Acad Sci U S A       Date:  2020-06-29       Impact factor: 11.205

5.  Thirty-thousand-year-old distant relative of giant icosahedral DNA viruses with a pandoravirus morphology.

Authors:  Matthieu Legendre; Julia Bartoli; Lyubov Shmakova; Sandra Jeudy; Karine Labadie; Annie Adrait; Magali Lescot; Olivier Poirot; Lionel Bertaux; Christophe Bruley; Yohann Couté; Elizaveta Rivkina; Chantal Abergel; Jean-Michel Claverie
Journal:  Proc Natl Acad Sci U S A       Date:  2014-03-03       Impact factor: 11.205

6.  MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms.

Authors:  Sudhir Kumar; Glen Stecher; Michael Li; Christina Knyaz; Koichiro Tamura
Journal:  Mol Biol Evol       Date:  2018-06-01       Impact factor: 16.240

7.  UFBoot2: Improving the Ultrafast Bootstrap Approximation.

Authors:  Diep Thi Hoang; Olga Chernomor; Arndt von Haeseler; Bui Quang Minh; Le Sy Vinh
Journal:  Mol Biol Evol       Date:  2018-02-01       Impact factor: 16.240

8.  ModelFinder: fast model selection for accurate phylogenetic estimates.

Authors:  Subha Kalyaanamoorthy; Bui Quang Minh; Thomas K F Wong; Arndt von Haeseler; Lars S Jermiin
Journal:  Nat Methods       Date:  2017-05-08       Impact factor: 28.547

9.  Tailed giant Tupanvirus possesses the most complete translational apparatus of the known virosphere.

Authors:  Jônatas Abrahão; Lorena Silva; Ludmila Santos Silva; Jacques Yaacoub Bou Khalil; Rodrigo Rodrigues; Thalita Arantes; Felipe Assis; Paulo Boratto; Miguel Andrade; Erna Geessien Kroon; Bergmann Ribeiro; Ivan Bergier; Herve Seligmann; Eric Ghigo; Philippe Colson; Anthony Levasseur; Guido Kroemer; Didier Raoult; Bernard La Scola
Journal:  Nat Commun       Date:  2018-02-27       Impact factor: 14.919

  9 in total

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