Literature DB >> 20007369

Giant Marseillevirus highlights the role of amoebae as a melting pot in emergence of chimeric microorganisms.

Mickaël Boyer1, Natalya Yutin, Isabelle Pagnier, Lina Barrassi, Ghislain Fournous, Leon Espinosa, Catherine Robert, Saïd Azza, Siyang Sun, Michael G Rossmann, Marie Suzan-Monti, Bernard La Scola, Eugene V Koonin, Didier Raoult.   

Abstract

Giant viruses such as Mimivirus isolated from amoeba found in aquatic habitats show biological sophistication comparable to that of simple cellular life forms and seem to evolve by similar mechanisms, including extensive gene duplication and horizontal gene transfer (HGT), possibly in part through a viral parasite, the virophage. We report here the isolation of "Marseille" virus, a previously uncharacterized giant virus of amoeba. The virions of Marseillevirus encompass a 368-kb genome, a minimum of 49 proteins, and some messenger RNAs. Phylogenetic analysis of core genes indicates that Marseillevirus is the prototype of a family of nucleocytoplasmic large DNA viruses (NCLDV) of eukaryotes. The genome repertoire of the virus is composed of typical NCLDV core genes and genes apparently obtained from eukaryotic hosts and their parasites or symbionts, both bacterial and viral. We propose that amoebae are "melting pots" of microbial evolution where diverse forms emerge, including giant viruses with complex gene repertoires of various origins.

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Year:  2009        PMID: 20007369      PMCID: PMC2799887          DOI: 10.1073/pnas.0911354106

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  30 in total

1.  Common origin of four diverse families of large eukaryotic DNA viruses.

Authors:  L M Iyer; L Aravind; E V Koonin
Journal:  J Virol       Date:  2001-12       Impact factor: 5.103

2.  A giant virus in amoebae.

Authors:  Bernard La Scola; Stéphane Audic; Catherine Robert; Liang Jungang; Xavier de Lamballerie; Michel Drancourt; Richard Birtles; Jean-Michel Claverie; Didier Raoult
Journal:  Science       Date:  2003-03-28       Impact factor: 47.728

3.  Analysis of the complete genome sequence of the Hz-1 virus suggests that it is related to members of the Baculoviridae.

Authors:  Chia-Hsiung Cheng; Su-Mei Liu; Teh-Yuan Chow; Yu-Yun Hsiao; Dan-Ping Wang; Jiann-Jang Huang; Hong-Hwa Chen
Journal:  J Virol       Date:  2002-09       Impact factor: 5.103

Review 4.  Genome trees and the tree of life.

Authors:  Yuri I Wolf; Igor B Rogozin; Nick V Grishin; Eugene V Koonin
Journal:  Trends Genet       Date:  2002-09       Impact factor: 11.639

5.  MUSCLE: multiple sequence alignment with high accuracy and high throughput.

Authors:  Robert C Edgar
Journal:  Nucleic Acids Res       Date:  2004-03-19       Impact factor: 16.971

Review 6.  Microorganisms resistant to free-living amoebae.

Authors:  Gilbert Greub; Didier Raoult
Journal:  Clin Microbiol Rev       Date:  2004-04       Impact factor: 26.132

7.  Mimivirus and Mimiviridae: giant viruses with an increasing number of potential hosts, including corals and sponges.

Authors:  Jean-Michel Claverie; Renata Grzela; Audrey Lartigue; Alain Bernadac; Serge Nitsche; Jean Vacelet; Hiroyuki Ogata; Chantal Abergel
Journal:  J Invertebr Pathol       Date:  2009-05-18       Impact factor: 2.841

Review 8.  Giant viruses infecting algae.

Authors:  J L Van Etten; R H Meints
Journal:  Annu Rev Microbiol       Date:  1999       Impact factor: 15.500

9.  SKP1 connects cell cycle regulators to the ubiquitin proteolysis machinery through a novel motif, the F-box.

Authors:  C Bai; P Sen; K Hofmann; L Ma; M Goebl; J W Harper; S J Elledge
Journal:  Cell       Date:  1996-07-26       Impact factor: 41.582

10.  TREEFINDER: a powerful graphical analysis environment for molecular phylogenetics.

Authors:  Gangolf Jobb; Arndt von Haeseler; Korbinian Strimmer
Journal:  BMC Evol Biol       Date:  2004-06-28       Impact factor: 3.260

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  157 in total

1.  Origin and evolution of eukaryotic large nucleo-cytoplasmic DNA viruses.

Authors:  Eugene V Koonin; Natalya Yutin
Journal:  Intervirology       Date:  2010-06-15       Impact factor: 1.763

2.  Giant virus with a remarkable complement of genes infects marine zooplankton.

Authors:  Matthias G Fischer; Michael J Allen; William H Wilson; Curtis A Suttle
Journal:  Proc Natl Acad Sci U S A       Date:  2010-10-25       Impact factor: 11.205

3.  Order to the viral universe.

Authors:  Mart Krupovič; Dennis H Bamford
Journal:  J Virol       Date:  2010-10-06       Impact factor: 5.103

Review 4.  Cell Walls and the Convergent Evolution of the Viral Envelope.

Authors:  Jan P Buchmann; Edward C Holmes
Journal:  Microbiol Mol Biol Rev       Date:  2015-12       Impact factor: 11.056

5.  Contributions of ancestral inter-species recombination to the genetic diversity of extant Streptomyces lineages.

Authors:  Cheryl P Andam; Mallory J Choudoir; Anh Vinh Nguyen; Han Sol Park; Daniel H Buckley
Journal:  ISME J       Date:  2016-02-05       Impact factor: 10.302

6.  Faustovirus, an asfarvirus-related new lineage of giant viruses infecting amoebae.

Authors:  Dorine Gaëlle Reteno; Samia Benamar; Jacques Bou Khalil; Julien Andreani; Nicholas Armstrong; Thomas Klose; Michael Rossmann; Philippe Colson; Didier Raoult; Bernard La Scola
Journal:  J Virol       Date:  2015-07       Impact factor: 5.103

7.  Origin and diversification of the L-amino oxidase family in innate immune defenses of animals.

Authors:  Austin L Hughes
Journal:  Immunogenetics       Date:  2010-09-28       Impact factor: 2.846

8.  Cell extract-containing medium for culture of intracellular fastidious bacteria.

Authors:  Sudhir Singh; Malgorzata Kowalczewska; Sophie Edouard; Carole Eldin; Céline Perreal; Pascal Weber; Said Azza; Didier Raoult
Journal:  J Clin Microbiol       Date:  2013-06-05       Impact factor: 5.948

9.  Complete genome sequence of Cannes 8 virus, a new member of the proposed family "Marseilleviridae".

Authors:  Sarah Aherfi; Isabelle Pagnier; Ghislain Fournous; Didier Raoult; Bernard La Scola; Philippe Colson
Journal:  Virus Genes       Date:  2013-08-04       Impact factor: 2.332

10.  Complete genome sequence of Courdo11 virus, a member of the family Mimiviridae.

Authors:  Niyaz Yoosuf; Isabelle Pagnier; Ghislain Fournous; Catherine Robert; Bernard La Scola; Didier Raoult; Philippe Colson
Journal:  Virus Genes       Date:  2013-12-01       Impact factor: 2.332

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