| Literature DB >> 34957310 |
Xiaoqin Wei1, Xiaowen Chen1, Ce Lai1, Yuanzhong Zhu1, Hanfeng Yang1,2, Yong Du1,2.
Abstract
Liver image segmentation has been increasingly employed for key medical purposes, including liver functional assessment, disease diagnosis, and treatment. In this work, we introduce a liver image segmentation method based on generative adversarial networks (GANs) and mask region-based convolutional neural networks (Mask R-CNN). Firstly, since most resulting images have noisy features, we further explored the combination of Mask R-CNN and GANs in order to enhance the pixel-wise classification. Secondly, k-means clustering was used to lock the image aspect ratio, in order to get more essential anchors which can help boost the segmentation performance. Finally, we proposed a GAN Mask R-CNN algorithm which achieved superior performance in comparison with the conventional Mask R-CNN, Mask-CNN, and k-means algorithms in terms of the Dice similarity coefficient (DSC) and the MICCAI metrics. The proposed algorithm also achieved superior performance in comparison with ten state-of-the-art algorithms in terms of six Boolean indicators. We hope that our work can be effectively used to optimize the segmentation and classification of liver anomalies.Entities:
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Year: 2021 PMID: 34957310 PMCID: PMC8702320 DOI: 10.1155/2021/9956983
Source DB: PubMed Journal: Biomed Res Int Impact factor: 3.411
Figure 1Framework of Mask R-CNN.
Figure 2Framework of RoIAlign with k-means clustering.
Figure 3Framework of GAN Mask R-CNN.
Box 1GAN training with the minibatch stochastic gradient descent.
Figure 4A comparison of the segmentation results between the improved and conventional Mask R-CNN algorithms.
Comparison of segmentation algorithms before and after enhancements.
| Algorithm type | Accuracy (%) | Recall (%) | Specificity (%) | Precision (%) | FOR (%) | FDR (%) |
|---|---|---|---|---|---|---|
| Original Mask R-CNN | 85.2 | 88.3 | 89.0 | 87.4 | 20.1 | 12.6 |
| Mask R − CNN + | 86.4 | 88.2 | 89.1 | 87.5 | 19.2 | 12.5 |
| GAN Mask R-CNN | 91.3 | 92.2 | 92.4 | 92.3 | 13.1 | 7.7 |
Comparison of segmentation algorithms before and after enhancements.
| Algorithm type | DSC (%) | VOE (%) | RVD (%) | ASSD (mm) | RMSD (mm) | MSSD (mm) |
|---|---|---|---|---|---|---|
| Original Mask R-CNN | 92.4 | 9.32 | 0.53 | 3.32 | 5.42 | 20.67 |
| Mask R − CNN + | 93.3 | 9.11 | 0.54 | 2.23 | 3.32 | 21.32 |
| Improved Mask R-CNN | 95.3 | 9.34 | 0.44 | 2.23 | 2.32 | 21.58 |
Figure 5A comparison of the liver segmentation results between three algorithms: (1) FCN-8s, (2) U-Net, (3) 2D-FCN2, (4) 2D-FCN1, (5) 2D-dense-FCN, (6) 3D-FCN, (7) H-DenseUNet, (8) 3D U-Net, (9) IU-Net, (10) GIU-Net, and (11) GAN Mask R-CNN.
A comparison of four liver segmentation algorithms based on six metrics.
| No. | Algorithm type | Accuracy (%) | Recall (%) | Specificity (%) | Precision (%) | FOR (%) | FDR (%) |
|---|---|---|---|---|---|---|---|
| 1 | FCN-8s | 73.2 | 75.3 | 75.0 | 74.4 | 20.1 | 25.6 |
| 2 | U-Net | 71.3 | 73.2 | 74.1 | 75.5 | 19.2 | 24.5 |
| 3 | 2D-FCN2 | 75.4 | 77.2 | 78.4 | 76.3 | 13.1 | 23.7 |
| 4 | 2D-FCN1 | 72.3 | 73.4 | 73.6 | 74.5 | 14.5 | 25.5 |
| 5 | 2D-dense-FCN | 75.3 | 76.7 | 75.6 | 77.8 | 12.9 | 22.2 |
| 6 | 3D-FCN | 82.3 | 81.7 | 82.9 | 80.1 | 10.1 | 19.9 |
| 7 | H-DenseUNet | 83.3 | 83.4 | 83.0 | 80.9 | 10.0 | 19.1 |
| 8 | 3D U-Net | 86.3 | 87.7 | 88.3 | 87.3 | 11.5 | 12.7 |
| 9 | IU-Net | 88.3 | 89.3 | 90.2 | 92.9 | 16.3 | 7.1 |
| 10 | GIU-Net | 90.2 | 91.6 | 92.8 | 90.7 | 9.8 | 9.3 |
| 11 | GAN Mask R-CNN | 91.3 | 92.2 | 92.4 | 92.3 | 13.1 | 7.7 |