Literature DB >> 32658781

Fully automated quantitative assessment of hepatic steatosis in liver transplants.

Massimo Salvi1, Luca Molinaro2, Jasna Metovic3, Damiano Patrono4, Renato Romagnoli4, Mauro Papotti3, Filippo Molinari5.   

Abstract

BACKGROUND: The presence of macro- and microvesicular steatosis is one of the major risk factors for liver transplantation. An accurate assessment of the steatosis percentage is crucial for determining liver graft transplantability, which is currently based on the pathologists' visual evaluations on liver histology specimens.
METHOD: The aim of this study was to develop and validate a fully automated algorithm, called HEPASS (HEPatic Adaptive Steatosis Segmentation), for both micro- and macro-steatosis detection in digital liver histological images. The proposed method employs a hybrid deep learning framework, combining the accuracy of an adaptive threshold with the semantic segmentation of a deep convolutional neural network. Starting from all white regions, the HEPASS algorithm was able to detect lipid droplets and classify them into micro- or macrosteatosis.
RESULTS: The proposed method was developed and tested on 385 hematoxylin and eosin (H&E) stained images coming from 77 liver donors. Automated results were compared with manual annotations and nine state-of-the-art techniques designed for steatosis segmentation. In the TEST set, the algorithm was characterized by 97.27% accuracy in steatosis quantification (average error 1.07%, maximum average error 5.62%) and outperformed all the compared methods.
CONCLUSIONS: To the best of our knowledge, the proposed algorithm is the first fully automated algorithm for the assessment of both micro- and macrosteatosis in H&E stained liver tissue images. Being very fast (average computational time 0.72 s), this algorithm paves the way for automated, quantitative and real-time liver graft assessments.
Copyright © 2020 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  Automatic segmentation; Computer-aided image analysis; Digital pathology; Liver biopsy; Steatosis assessment

Mesh:

Year:  2020        PMID: 32658781     DOI: 10.1016/j.compbiomed.2020.103836

Source DB:  PubMed          Journal:  Comput Biol Med        ISSN: 0010-4825            Impact factor:   4.589


  5 in total

1.  Integration of Deep Learning and Active Shape Models for More Accurate Prostate Segmentation in 3D MR Images.

Authors:  Massimo Salvi; Bruno De Santi; Bianca Pop; Martino Bosco; Valentina Giannini; Daniele Regge; Filippo Molinari; Kristen M Meiburger
Journal:  J Imaging       Date:  2022-05-11

2.  Liver segmentation in CT imaging with enhanced mask region-based convolutional neural networks.

Authors:  Xiaowen Chen; Xiaoqin Wei; Mingyue Tang; Aimin Liu; Ce Lai; Yuanzhong Zhu; Wenjing He
Journal:  Ann Transl Med       Date:  2021-12

3.  Accurate and generalizable quantitative scoring of liver steatosis from ultrasound images via scalable deep learning.

Authors:  Bowen Li; Dar-In Tai; Ke Yan; Yi-Cheng Chen; Cheng-Jen Chen; Shiu-Feng Huang; Tse-Hwa Hsu; Wan-Ting Yu; Jing Xiao; Lu Le; Adam P Harrison
Journal:  World J Gastroenterol       Date:  2022-06-14       Impact factor: 5.374

Review 4.  State of machine and deep learning in histopathological applications in digestive diseases.

Authors:  Soma Kobayashi; Joel H Saltz; Vincent W Yang
Journal:  World J Gastroenterol       Date:  2021-05-28       Impact factor: 5.742

5.  Automatic Liver Segmentation in CT Images with Enhanced GAN and Mask Region-Based CNN Architectures.

Authors:  Xiaoqin Wei; Xiaowen Chen; Ce Lai; Yuanzhong Zhu; Hanfeng Yang; Yong Du
Journal:  Biomed Res Int       Date:  2021-12-16       Impact factor: 3.411

  5 in total

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