| Literature DB >> 34956869 |
Chengzhou Zhang1, Qinglin Yang1, Fan Lin1,2, Heng Ma1, Haicheng Zhang1, Ran Zhang3, Ping Wang1, Ning Mao1.
Abstract
OBJECTIVES: This study aimed to distinguish preoperatively anterior mediastinal thymic cysts from thymic epithelial tumors via a computed tomography (CT)-based radiomics nomogram.Entities:
Keywords: computed tomography; cyst; nomogram; radiomics; thymic epithelial tumor
Year: 2021 PMID: 34956869 PMCID: PMC8702557 DOI: 10.3389/fonc.2021.744021
Source DB: PubMed Journal: Front Oncol ISSN: 2234-943X Impact factor: 6.244
Figure 1Flow chart of patients’ enrolment.
Figure 2Radiomics workflow of the study.
The patients’ characteristics and conventional CT findings of the two cohorts.
| Characteristics | Training cohort | Validation cohort | ||||
|---|---|---|---|---|---|---|
| Thymic cyst (n = 59) | Thymic epithelial tumor (n = 92) | p | Thymic cyst (n = 15) | Thymic epithelial tumor (n = 24) | p | |
| Gender (%) | ||||||
| Male | 24/59 | 34/92 | 0.646 | 6/15 | 7/24 | 0.508 |
| Female | 35/59 | 58/92 | 9/15 | 17/24 | ||
| Age (year) | 52.75 ± 10.87 | 54.75 ± 11.86 | 0.297 | 55.67 ± 9.27 | 54.46 ± 9.04 | 0.292 |
| Myasthenia gravis (%) | 4/59 | 17/92 | 0.043 | 0/15 | 6/24 | 0.065 |
| Location (%) | ||||||
| Right | 13/59 | 29/92 | 0.026 | 3/15 | 11/24 | 0.106 |
| Left | 18/59 | 39/92 | 5/15 | 9/24 | ||
| Midline | 28/59 | 24/92 | 7/15 | 4/24 | ||
| Size (cm) | 2.73 ± 1.41 | 3.84 ± 1.79 | 0.000 | 2.46 ± 0.68 | 3.41 ± 1.44 | 0.023 |
| Lesion edge (%) | ||||||
| Smooth | 51/59 | 67/92 | 0.048 | 10/15 | 20/24 | 0.266 |
| Rough | 8/59 | 25/92 | 5/15 | 4/24 | ||
| Lesion shape (%) | ||||||
| Round | 26/59 | 38/92 | 0.158 | 4/15 | 10/24 | 0.041 |
| Oval | 25/59 | 49/92 | 7/15 | 14/24 | ||
| Plaque | 8/59 | 5/92 | 4/15 | 0/24 | ||
| Lobulation (%) | 7/59 | 60/92 | 0.000 | 1/15 | 12/24 | 0.006 |
| Conformal to the shape of adjacent mediastinum (%) | 14/59 | 2/92 | 0.000 | 6/15 | 2/24 | 0.037 |
| Calcification (%) | 11/59 | 27/92 | 0.139 | 1/15 | 8/24 | 0.115 |
| Homogeneous (%) | 56/59 | 67/92 | 0.001 | 14/15 | 16/24 | 0.115 |
| CT value (HU) | 28.16 ± 17.64 | 47.25 ± 9.55 | 0.000 | 24.60 ± 17.34 | 46.67 ± 12.87 | 0.000 |
Least absolute shrinkage and selection operator (LASSO) coefficient profiles of the 16 features.
| Radiomics Features | Coefficients |
|---|---|
| wavelet-LLH_firstorder_Minimum | −0.06640596 |
| wavelet-HLL_glcm_Autocorrelation | 0.087935231 |
| wavelet-LLH_glrlm_RunEntropy | 0.017874634 |
| original_shape_Maximum2DDiameterSlice | 0.009097243 |
| original_shape_Elongation | 0.103026944 |
| wavelet-HHL_glszm_ZoneEntropy | 0.043976985 |
| wavelet-HHL_glcm_Autocorrelation | −0.007486597 |
| wavelet-HHL_gldm_GrayLevelVariance | −0.004601087 |
| wavelet-HHL_firstorder_Entropy | −0.000113446 |
| wavelet-HHL_glszm_GrayLevelVariance | 0.017546166 |
| wavelet-HHL_glszm_GrayLevelNonUniformityNormalized | −1.51E-08 |
| logarithm_firstorder_Range | 0.058735878 |
| exponential_firstorder_Minimum | −0.044695771 |
| square_firstorder_Minimum | −0.034266806 |
| square_firstorder_Kurtosis | −0.034990685 |
| squareroot_firstorder_RobustMeanAbsoluteDeviation | 0.006370002 |
glcm, gray level co-occurrence matrix; glrlm, gray level run length matrix; glszm, gray level size zone matrix; gldm, gray level dependence matrix.
Figure 3Radiomics nomogram with Rad-score and three conventional CT findings, including lesion edge, lobulation, and CT value.
Figure 4ROC curves of radiomics nomogram, Rad-score, conventional CT model, and judgment by radiologists in the training (A) and validation (B) cohorts.
Predictive performances of radiomics nomogram, Rad-score, conventional CT model, and judgment by radiologists in the training and validation cohorts.
| Model | Training cohort | Validation cohort | ||||||
|---|---|---|---|---|---|---|---|---|
| AUC (95% CI) | Sensitivity (95% CI) | Specificity (95% CI) | Accuracy | AUC (95% CI) | Sensitivity (95% CI) | Specificity (95% CI) | Accuracy | |
| Radiomics nomogram | 0.980 (0.963–0.993) | 0.870 (0.779–0.928) | 0.983 (0.897–0.999) | 0.914 | 0.992 (0.969–1.000) | 0.958 (0.769–0.998) | 0.933 (0.660–0.997) | 0.949 |
| Rad-score | 0.909 (0.864–0.948) | 0.946 (0.872–0.980) | 0.746 (0.613–0.846) | 0.868 | 0.953 (0.893–0.997) | 0.917 (0.715–0.985) | 0.867 (0.584–0.977) | 0.897 |
| Conventional CT | 0.917 (0.882–0.949) | 0.783 (0.682–0.859) | 0.898 (0.785–0.958) | 0.828 | 0.868 (0.759–0.944) | 0.583 (0.369–0.772) | 1.000 (0.747–1.000) | 0.744 |
| Radiologist | NA | 0.859 (0.767–0.920) | 0.373 (0.253–0.509) | 0.669 | NA | 0.792 (0.573–0.921) | 0.400 (0.175–0.671) | 0.641 |
Figure 5ROC curves of radiomics nomogram in the stratification verification according to the size in the validation cohort.
Predictive performance of radiomics nomogram in the stratification verification according to the size in the validation cohort.
| Size (cm) | Predictive performance | |||
|---|---|---|---|---|
| AUC (95% CI) | Sensitivity (95% CI) | Specificity (95% CI) | Accuracy | |
| ≤2 | 1.000 (1.000–1.000) | 0.800 (0.299–0.989) | 1.000 (0.310–1.000) | 0.875 |
| 2–3 | 1.000 (1.000–1.000) | 0.800 (0.299–0.989) | 1.000 (0.655–1.000) | 0.933 |
| >3 | 1.000 (1.000–1.000) | 0.929 (0.769–0.998) | 1.000 (0.660–0.997) | 0.938 |
Figure 6Calibration curves of radiomics nomogram. The diagonal line represented the perfect prediction of the radiomics nomogram. The red and blue solid line represented the calibration curve of nomogram in the training and validation cohorts, separately. The calibration curves were close to the diagonal line, which indicated good prediction performance of the nomogram.
Figure 7Decision curve analysis (DCA) for the three models. The net benefit versus the threshold probability was plotted. The x-axis represents the threshold probability, while the y-axis represents the net benefits. The sensitivity and specificity of the model are calculated at each threshold to determine the net benefit. The DCAs showed that the net benefits of the nomogram model (green line) were superior to the benefits of the conventional CT model (blue line) and the Rad-score based model (red line) with the threshold probability range from 0 to 1.