| Literature DB >> 34943973 |
Galia Maik-Rachline1, Inbal Wortzel1, Rony Seger1.
Abstract
The mitogen-activated protein kinase (MAPK) cascades transmit signals from extracellular stimuli to a variety of distinct cellular processes. The MAPKKs in each cascade specifically phosphorylate and activate their cognate MAPKs, indicating that this step funnels various signals into a seemingly linear pathway. Still, the effects of these cascades vary significantly, depending on the identity of the extracellular signals, which gives rise to proper outcomes. Therefore, it is clear that the specificity of the signals transmitted through the cascades is tightly regulated in order to secure the desired cell fate. Indeed, many regulatory components or processes that extend the specificity of the cascades have been identified. Here, we focus on a less discussed mechanism, that is, the role of distinct components in each tier of the cascade in extending the signaling specificity. We cover the role of distinct genes, and the alternatively spliced isoforms of MAPKKs and MAPKs, in the signaling specificity. The alternatively spliced MEK1b and ERK1c, which form an independent signaling route, are used as the main example. Unlike MEK1/2 and ERK1/2, this route's functions are limited, including mainly the regulation of mitotic Golgi fragmentation. The unique roles of the alternatively spliced isoforms indicate that these components play an essential role in determining the proper cell fate in response to distinct stimulations.Entities:
Keywords: ERK; ERK1c; JNK; MAPK; alternative splicing; p38
Mesh:
Substances:
Year: 2021 PMID: 34943973 PMCID: PMC8699841 DOI: 10.3390/cells10123466
Source DB: PubMed Journal: Cells ISSN: 2073-4409 Impact factor: 6.600
Figure 1Signaling specificity and multiple isoforms of the MAPK signaling pathways. The MAPKs operate within signaling cascades composed of three to five layers (tiers) of protein kinases. The signals from the cascades are transmitted via sequential phosphorylation and activation of the components in each layer. The four cascades, which have been identified are shown: the human ERK1/2 cascade with MEK1/2/1b and ERK1/1c/2 at the MAPKK and MAPK layers. The p38MAPK cascade with MKK3/3b/6/6b, and p38α/Exip/Mxi2/p38β/p38γ/p38δ; the JNK cascade with MKK4/4δ/7γ1/γ2/β1/β2/α1/α2 and JNK1α1/1α2/1β1/1β2/2α1/2α2/2β1/2β2/3α1(L)/3α2(L)/3α2(S); and the ERK5 cascade with MEK5, and ERK5/5-T. It should be noted that the isoforms presented are those whose expression has been confirmed. Other alternatively spliced transcripts whose protein expression is not confirmed or may exist in other organisms are not presented here as well. The main proteins in each layer of each cascade (except for JNK) appear on top. As for JNK, it seems that all components may be substantially expressed, at least in some cells. Each of the kinases is composed of a kinase domain (central region) as well as N and C terminus represented by a line on the left (N terminus) and right (C terminus) of all kinase domains. The patterns in some of the proteins (e.g., MEK1b) represent low expression levels (less than 10% of the main gene product). Different colors and length in the N or C terminus represent distinct sequences and number of AA compared to the main isoform (e.g., ERK1c). In order to make changes more visible, the scale is not always accurate. * insertion, ** β2 without insertion, γ2 with insertion, *** α1/α2 have different length C termini, # alternative exon 6 between the α and β isoforms that result in a change of 5–7 amino acids in this region. ## deletion. More information on the structure appears in Table 1.
Characteristics of the alternative spliced isoforms of the components of the MAPKKs and MAPKs of all four MAPK cascades. The alternatively spliced isoforms presented are only from proteins whose expression has been confirmed, although more lowly expressed forms whose transcripts have been identified may exist. The structural and functional properties of the lowly expressed alternatively spliced isoforms of the ERK1/2, p38, and ERK5 cascades are presented as compared to the main isoforms. These main isoforms are not presented here as their properties are very well covered in many other reviews. As for the components of the MAPKK tier of the JNK and p38 cascade, the alternatively spliced isoforms are presented as compared to the main isoforms MKK3, MKK6, MKK4 and MKK7γ1 (not presented), whose expression is usually higher than the others, although the latter might be substantially expressed in some cells. Due to similar expression level of several JNKs, there is no “main” isoform and the comparison of the spliced isoforms is to the other components in the tier.
| Alternative Spliced Forms | Product of: | Sequence Changes | MW | Functional Changes | Ref. | |
|---|---|---|---|---|---|---|
|
| MEK1b | MAP2K1 (MEK1) | Deletion of 26 AA in subdomain 5 of MEK1. | 43.5 kDa | Reduced activity, change in substrate specificity. | [ |
| MKK3b | MAP2K3 (MKK3) | Additional 29 amino acids N-terminal to MKK3. | 40 kDa | Slightly Elevates substrates’ phosphorylation. | [ | |
| MKK6b | MAP2K6 (MKK6) | Additional 56 amino acids N terminal to MKK6. | 38.5 kDa | Affect substrate specificity. | [ | |
| MKK7α1 | MAP2K7 (MKK7) | Deletion of the N terminal 89 AA of MKK7γ1. | 40 kDa | Reduced activity due to lack of JNK binding domain. | [ | |
| MKK7α2 | MAP2K7 (MKK7) | Deletion of the N terminal 89 AA, + additional 33AA in the | 43.5 kDa | Reduced activity due to lack of JNK binding | [ | |
| MKK7β1 | MAP2K7 (MKK7) | Deletion of 16 amino within the | 50 kDa | Distinct subcelluar localization, and lower binding to JNK due to lack of D domain. Distinct effect in cancers compared to MKK7γ1 | [ | |
| MKK7β2 | MAP2K7 (MKK7) | Deletion of 16 amino within the | 53.5 kDa | Distinct subcelluar localization, a lower binding to JNK and distinct effect in cancers compared to MKK7γ1 | [ | |
| MKK7γ2 | MAP2K7 (MKK7) | Addition of 33 AA to the | 53.5 kDa | No known differences | [ | |
|
| ERK1c | MAPK1 (ERK1) | Change of the C terminal 40 AA with 18 other AA compared to ERK1. | 41.5 kDa | Reduced activity and change of substrate specificity as compared with ERK1. | [ |
| Exip | MAPK14 (p38α) | Change of the C terminal 106 AA with 53 other AA compared to p38α. | 35.5 kDa | Reduced activity. Change in subcellular localization and protein interaction, as compared to p38α | [ | |
| Mxi2 | MAPK14 (p38α) | Change of the C terminal 81 AA with 17 other AA compared to p38α. | 34 kDa | Reduced activity, change in substrate specificity, distinct protein interaction, and distinct regulation as compared to p38α. | [ | |
| JNK1α1 | MAPK8 (JNK1) | Alternative exon 6a, Short | 46 kDa | Alternative substrate binding compared to β1 and β2. | [ | |
| JNK1α2 | MAPK8 (JNK1) | Alternative exon 6a, long | 54 kDa | Alternative substrate binding compared to β1 and β2. | [ | |
| JNK1β1 | MAPK8 (JNK1) | Alternative exon 6b, short | 46 kDa | Changes in expression level from α1 and α2. | [ | |
| JNK1β2 | MAPK8 (JNK1) | Alternative exon 6b, long | 54 kDa | Changes in expression level from α1 and α2. | [ | |
| JNK2α1 | MAPK9 (JNK2) | Alternative exon 6b, short | 46 kDa | Alternative substrate binding compared to β1 and β2. | [ | |
| JNK2α2 | MAPK9 (JNK2) | Alternative exon 6b, long | 54 kDa | Alternative substrate binding compared to β1 and β2. | [ | |
| JNK2β1 | MAPK9 (JNK2) | Alternative exon 6a, short | 46 kDa | Alternative substrate binding compared to α1 and α2. | [ | |
| JNK2β2 | MAPK9 (JNK2) | Alternative exon 6a, long | 54 kDa | Alternative substrate binding compared to α1 and α2. | [ | |
| JNK3α1(L) | MAPK10 (JNK3) | Long | 50.5 kDa | Probable changes in protein interaction. | [ | |
| JNK3α2(L) | MAPK10 (JNK3) | Long | 58.5 kDa | Probable changes in protein interaction. | [ | |
| JNK3α2(S) | MAPK10 (JNK3) | Short | 54 kDa | Probable changes in protein interaction. | [ | |
| ERK5-T | MAPK7 (ERK5) | Change of the | 61 kDa | Distinct subcellular localization and protein binding compared to ERK5. | [ |
Figure 2Schematic presentation of ERK1c function in the Golgi. An illustration demonstrating the unique role of ERK1c isoform in the Golgi fragmentation process at different stages of the cell cycle. Prophase: (A) CDK1 becomes active, and phosphorylates ERK1c on Ser343 in its unique C-terminus. (B) Phosphorylated ERK1c interacts with a shuttling complex of PI4KIIIβ and 14-3-3γ, which mediates its Golgi translocation. Prometaphase: (C) In the Golgi, ERK1c is phosphorylated by MEK1b, becomes fully active and induces mitotic Golgi fragmentation. The Golgi is organized in stacks, while GM130 is found in between these stacks. The microtubules (MTs) are polymerized from the microtubules originating center (MTOC) and stabilize the Golgi structure. Both HOOK3 and CLASP2 interact together with the MTs and Golgi. (D) Once entering mitosis, HOOK3 is phosphorylated by both ERK1c and AurA, while CLASP2 might be phosphorylated by AurA. At this time the Golgi stacks starts to break into ribbons. Metaphase: (E) The phosphorylation of HOOK3 and CLASP2 allow the complete fragmentation of the Golgi into a haze. At this time, phosphorylated CLASP2 maintains its interaction with the MTs that originate from the centromeres, while phosphorylated HOOK3 interacts with GM130.