Literature DB >> 34936154

A novel violet fluorescent protein contains a unique oxidized tyrosine as the simplest chromophore ever reported in fluorescent proteins.

Abigail Roldán-Salgado1, Liya Muslinkina2, Sergei Pletnev3, Nadya Pletneva4, Vladimir Pletnev4, Paul Gaytán1.   

Abstract

We describe an engineered violet fluorescent protein from the lancelet Branchiostoma floridae (bfVFP). This is the first example of a GFP-like fluorescent protein with a stable fluorescent chromophore lacking an imidazolinone ring; instead, it consists of oxidized tyrosine 68 flanked by glycine 67 and alanine 69. bfVFP contains the simplest chromophore reported in fluorescent proteins and was generated from the yellow protein lanFP10A2 by two synergetic mutations, S148H and C166I. The chromophore structure was confirmed crystallographically and by high-resolution mass spectrometry. The photophysical characteristics of bfVFP (323/430 nm, quantum yield 0.33, and Ec 14,300 M-1  cm-1 ) make it potentially useful for multicolor experiments to expand the excitation range of available FP biomarkers and Förster resonance energy transfer with blue and cyan fluorescent protein acceptors.
© 2021 The Protein Society.

Entities:  

Keywords:  chromophore; crystal structure; fluorescent protein; gene reporter; lancelet; mutagenesis; protein engineering

Mesh:

Substances:

Year:  2022        PMID: 34936154      PMCID: PMC8862416          DOI: 10.1002/pro.4265

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  48 in total

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4.  Processing of X-ray diffraction data collected in oscillation mode.

Authors:  Z Otwinowski; W Minor
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5.  The Role of the Tight-Turn, Broken Hydrogen Bonding, Glu222 and Arg96 in the Post-translational Green Fluorescent Protein Chromophore Formation.

Authors:  Nathan P Lemay; Alicia L Morgan; Elizabeth J Archer; Luisa A Dickson; Colleen M Megley; Marc Zimmer
Journal:  Chem Phys       Date:  2008-06-02       Impact factor: 2.348

6.  Features and development of Coot.

Authors:  P Emsley; B Lohkamp; W G Scott; K Cowtan
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

7.  Measurement of protein using bicinchoninic acid.

Authors:  P K Smith; R I Krohn; G T Hermanson; A K Mallia; F H Gartner; M D Provenzano; E K Fujimoto; N M Goeke; B J Olson; D C Klenk
Journal:  Anal Biochem       Date:  1985-10       Impact factor: 3.365

8.  Molecular Modeling Clarifies the Mechanism of Chromophore Maturation in the Green Fluorescent Protein.

Authors:  Bella L Grigorenko; Anna I Krylov; Alexander V Nemukhin
Journal:  J Am Chem Soc       Date:  2017-07-19       Impact factor: 15.419

9.  Kinetic isotope effect studies on the de novo rate of chromophore formation in fast- and slow-maturing GFP variants.

Authors:  Lauren J Pouwels; Liping Zhang; Nam H Chan; Pieter C Dorrestein; Rebekka M Wachter
Journal:  Biochemistry       Date:  2008-08-30       Impact factor: 3.162

10.  REFMAC5 for the refinement of macromolecular crystal structures.

Authors:  Garib N Murshudov; Pavol Skubák; Andrey A Lebedev; Navraj S Pannu; Roberto A Steiner; Robert A Nicholls; Martyn D Winn; Fei Long; Alexei A Vagin
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-03-18
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  1 in total

1.  A novel violet fluorescent protein contains a unique oxidized tyrosine as the simplest chromophore ever reported in fluorescent proteins.

Authors:  Abigail Roldán-Salgado; Liya Muslinkina; Sergei Pletnev; Nadya Pletneva; Vladimir Pletnev; Paul Gaytán
Journal:  Protein Sci       Date:  2022-01-03       Impact factor: 6.725

  1 in total

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