Literature DB >> 34935565

The integration of genetically-regulated transcriptomics and electronic health records highlights a pattern of medical outcomes related to increased hepatic transthyretin expression.

Gita A Pathak1,2, Antonella De Lillo1,3, Frank R Wendt1,2, Flavio De Angelis1,2,3, Dora Koller1,2, Brenda Cabrera Mendoza1,2, Daniel Jacoby4, Edward J Miller4, Joel N Buxbaum5, Renato Polimanti1,2.   

Abstract

Transthyretin (TTR) is the precursor of the fibrils that compromise organ function in hereditary and sporadic systemic amyloidoses (ATTR). RNA-interference and anti-sense therapeutics targeting TTR hepatic transcription have been shown to reduce TTR amyloid formation. In the present study, we leveraged genetic and phenotypic information from the UK Biobank and transcriptomic profiles from the Genotype-Tissue Expression project to test the association of genetically regulated TTR gene expression with 7149 traits assessed in 420,531 individuals. We conducted a multi-tissue analysis of TTR transcription and identified an association with a operational procedure related to bone fracture (p = 5.46×10-6). Using tissue-specific TTR expression information, we demonstrated that the association is driven by the genetic regulation of TTR hepatic expression (odds ratio [OR] = 3.46, p = 9.51×10-5). Using the UK Biobank electronic health records (EHRs), we investigated the comorbidities affecting individuals undergoing this surgical procedure. Excluding bone fracture EHRs, we identified a pattern of health outcomes previously associated with ATTR manifestations. These included osteoarthritis (OR = 3.18, p = 9.18×10-8), carpal tunnel syndrome (OR = 2.15, p = .002), and a history of gastrointestinal diseases (OR = 2.01, p = 8.07×10-4). In conclusion, our study supports that TTR hepatic expression can affect health outcomes linked to physiological and pathological processes presumably related to the encoded protein.

Entities:  

Keywords:  Amyloidosis; TTR; UK Biobank; gene expression; phenome-wide association study; retinol; thyroxine

Mesh:

Substances:

Year:  2021        PMID: 34935565      PMCID: PMC9213571          DOI: 10.1080/13506129.2021.2018678

Source DB:  PubMed          Journal:  Amyloid        ISSN: 1350-6129            Impact factor:   6.571


  56 in total

1.  Genetic variation of the transthyretin gene in wild-type transthyretin amyloidosis (ATTRwt).

Authors:  Jacquelyn L Sikora; Mark W Logue; Gloria G Chan; Brian H Spencer; Tatiana B Prokaeva; Clinton T Baldwin; David C Seldin; Lawreen H Connors
Journal:  Hum Genet       Date:  2014-11-04       Impact factor: 4.132

2.  First nationwide survey on systemic wild-type ATTR amyloidosis in Japan.

Authors:  Yoshiki Sekijima; Masahide Yazaki; Mitsuharu Ueda; Haruki Koike; Masahito Yamada; Yukio Ando
Journal:  Amyloid       Date:  2017-11-28       Impact factor: 7.141

Review 3.  Hereditary transthyretin amyloidosis: a model of medical progress for a fatal disease.

Authors:  David Adams; Haruki Koike; Michel Slama; Teresa Coelho
Journal:  Nat Rev Neurol       Date:  2019-06-17       Impact factor: 42.937

4.  Safety and efficacy of RNAi therapy for transthyretin amyloidosis.

Authors:  Teresa Coelho; David Adams; Ana Silva; Pierre Lozeron; Philip N Hawkins; Timothy Mant; Javier Perez; Joseph Chiesa; Steve Warrington; Elizabeth Tranter; Malathy Munisamy; Rick Falzone; Jamie Harrop; Jeffrey Cehelsky; Brian R Bettencourt; Mary Geissler; James S Butler; Alfica Sehgal; Rachel E Meyers; Qingmin Chen; Todd Borland; Renta M Hutabarat; Valerie A Clausen; Rene Alvarez; Kevin Fitzgerald; Christina Gamba-Vitalo; Saraswathy V Nochur; Akshay K Vaishnaw; Dinah W Y Sah; Jared A Gollob; Ole B Suhr
Journal:  N Engl J Med       Date:  2013-08-29       Impact factor: 91.245

Review 5.  Transthyretin V122I (pV142I)* cardiac amyloidosis: an age-dependent autosomal dominant cardiomyopathy too common to be overlooked as a cause of significant heart disease in elderly African Americans.

Authors:  Joel N Buxbaum; Frederick L Ruberg
Journal:  Genet Med       Date:  2017-01-19       Impact factor: 8.822

6.  Amyloid in biopsies of the gastrointestinal tract-a retrospective observational study on 542 patients.

Authors:  Sophie Freudenthaler; Ute Hegenbart; Stefan Schönland; Hans-Michael Behrens; Sandra Krüger; Christoph Röcken
Journal:  Virchows Arch       Date:  2016-02-25       Impact factor: 4.064

7.  Flexible statistical methods for estimating and testing effects in genomic studies with multiple conditions.

Authors:  Sarah M Urbut; Gao Wang; Peter Carbonetto; Matthew Stephens
Journal:  Nat Genet       Date:  2018-11-26       Impact factor: 38.330

8.  Senile systemic amyloidosis: clinical features at presentation and outcome.

Authors:  Jennifer H Pinney; Carol J Whelan; Aviva Petrie; Jason Dungu; Sanjay M Banypersad; Prayman Sattianayagam; Ashutosh Wechalekar; Simon D J Gibbs; Christopher P Venner; Nancy Wassef; Carolyn A McCarthy; Janet A Gilbertson; Dorota Rowczenio; Philip N Hawkins; Julian D Gillmore; Helen J Lachmann
Journal:  J Am Heart Assoc       Date:  2013-04-22       Impact factor: 5.501

Review 9.  Guideline of transthyretin-related hereditary amyloidosis for clinicians.

Authors:  Yukio Ando; Teresa Coelho; John L Berk; Márcia Waddington Cruz; Bo-Göran Ericzon; Shu-ichi Ikeda; W David Lewis; Laura Obici; Violaine Planté-Bordeneuve; Claudio Rapezzi; Gerard Said; Fabrizio Salvi
Journal:  Orphanet J Rare Dis       Date:  2013-02-20       Impact factor: 4.123

10.  Integrating predicted transcriptome from multiple tissues improves association detection.

Authors:  Alvaro N Barbeira; Milton Pividori; Jiamao Zheng; Heather E Wheeler; Dan L Nicolae; Hae Kyung Im
Journal:  PLoS Genet       Date:  2019-01-22       Impact factor: 5.917

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.