The MoFe7S9C1- unit of the nitrogenase cofactor (FeMoco) attracts chemists and biochemists due to its unusual ability to bind aerial dinitrogen (N2) at ambient condition and catalytically convert it into ammonia (NH3). The mode of N2 binding and its reaction pathways are yet not clear. An important conclusion has been made based on the very recent synthesis and isolation of model Fe(I/0)-complexes with sulfur-donor ligands under the cleavage of one Fe-S bond followed by binding of N2 at the Fe(0) center. These complexes are structurally relevant to the nitrogenase cofactor (MoFe7S9C1-). Herein, we report the EDA-NOCV analyses and NICS calculations of the dinitrogen-bonded dianionic complex Fe0-N2 (1) (having a CAr ← Fe π-bond) and monoanionic complex FeI-N2 (2) (having a CAr-Fe σ-bond) to provide a deeper insight into the Fe-N2 interacting orbitals and corresponding pairwise interaction energies (EDA-NOCV = energy decomposition analysis coupled with natural orbital for chemical valence; NICS = nucleus-independent chemical shifts). The orbital interaction in the Fe-N2 bond is significantly larger than Coulombic interactions, with major pairwise contributions coming from d(Fe) orbitals to the empty π* orbitals of N2 (three Fe → N2). ΔE int values are in the range of -61 to -77 kcal mol-1. Very interestingly, NICS calculations have been carried out for the fragments before and after binding of the N2 molecule. The computed σ- and π-aromaticity values are attributed to the position of the Fe atoms, oxidation states of Fe centers, and Fe-C bond lengths of these two complexes.
The MoFe7S9C1- unit of the nitrogenase cofactor (FeMoco) attracts chemists and biochemists due to its unusual ability to bind aerial dinitrogen (N2) at ambient condition and catalytically convert it into ammonia (NH3). The mode of N2 binding and its reaction pathways are yet not clear. An important conclusion has been made based on the very recent synthesis and isolation of model Fe(I/0)-complexes with sulfur-donor ligands under the cleavage of one Fe-S bond followed by binding of N2 at the Fe(0) center. These complexes are structurally relevant to the nitrogenase cofactor (MoFe7S9C1-). Herein, we report the EDA-NOCV analyses and NICS calculations of the dinitrogen-bonded dianionic complex Fe0-N2 (1) (having a CAr ← Fe π-bond) and monoanionic complex FeI-N2 (2) (having a CAr-Fe σ-bond) to provide a deeper insight into the Fe-N2 interacting orbitals and corresponding pairwise interaction energies (EDA-NOCV = energy decomposition analysis coupled with natural orbital for chemical valence; NICS = nucleus-independent chemical shifts). The orbital interaction in the Fe-N2 bond is significantly larger than Coulombic interactions, with major pairwise contributions coming from d(Fe) orbitals to the empty π* orbitals of N2 (three Fe → N2). ΔE int values are in the range of -61 to -77 kcal mol-1. Very interestingly, NICS calculations have been carried out for the fragments before and after binding of the N2 molecule. The computed σ- and π-aromaticity values are attributed to the position of the Fe atoms, oxidation states of Fe centers, and Fe-C bond lengths of these two complexes.
Dinitrogen (N2) binding and catalytic reductive protonation
leading to the formation of ammonia (NH3) are some of the
most important biochemical natural processes on the planet.[1−3] The reduced forms of N2 (bio-organic molecules such as
amino acid, peptide, nucleotide and nucleic acid etc.) are the parts
of different forms that are the building blocks of the living organism,
plants, and animals.[4] However, most of
the living species on the earth cannot directly utilize the aerial
N2 molecule although it is 78% of atmosphere of our planet.
This is due to the kinetic inertness of molecular dinitrogen. The
detailed bonding analysis (energy decomposition analysis coupled with
natural orbital for chemical valence (EDA-NOCV))[5] of N2 suggests that the Wiberg bond order of
N2 is little above three (3.03), possessing two π-bonds
and one σ-bond with overall 70% covalent orbital (ΔEorb) and 30% electrostatic (ΔEelstat) contributions. The σ and π contributions
are 65.6 and 34.4%, respectively. The very short N–N distance
of 1.102 Å contributes to a high Pauling repulsion (ΔEPauli) energy.[5] Molecular
N2 (:N≡N:) contains two low-lying pairs of electrons
(σ/σ*) in 2σg+/2σu+ that are not efficient for σ-donation,
while its doubly degenerate filled π-orbitals (1πu) (HOMO–1; Scheme , top) and doubly occupied 3σg+ (HOMO) orbital are higher in
energy and are available for bonding with acceptors in certain circumstances.[6] The LUMO and LUMO+1 are the doubly degenerate
π* (1πg) orbital and σ* orbital (3σu+) of N2,[5] respectively, which are available for
π-backdonations from metal atoms (Scheme ) to accept electron densities, leading to
the crucial elongation/activation of the N–N bond.
Scheme 1
(Top) Shape
of the MO of Bonding and Antibonding Orbitals and (Bottom)
End-On Orbital Interactions between Metal-Atom (M) and the N2 Molecule
Diazotrophs are bacteria and
archaea that can bind areal N2 and transform it into a
more stable reduced form such as
ammonia. They live in the soil. A family of plants, called legume,
whose roots are infected with nitrogen-fixing bacteria such as azotobacter
start living in the plant’s root. This bacterium provides nitrogen
products to legume pants by utilizing direct N2 from air.
The active enzyme of azotobacter is nitrogenase, which possesses a
monoanionic inorganic cluster [Mo(+3)Fe(+2.5)4Fe(+3)2Fe(+2)S(−2)9C(−4); (MoFe7S9C)1–].[7] This coordination cluster is protected from undergoing aerial oxidation
by the protein part of this enzyme. Two Fe–S/Fe–Mo–S
hetero-cubane units (Fe4S3 and MoFe3S3) are connected by a hexacoordinate lighter element
(carbon) and three μ3-S bridges to form the monoanionic
inorganic core MoFe7S9C1– having
nine bridging anions S2– and one μ6-C4– anion. MoFe7S9C1– (Scheme ; top right) has a ground-state spin S =
3/2 in the resting state.[1,2] Kinetic studies have
shown that it does not bind to molecular N2 in the resting
state. Rather it binds with N2 under reduced form (Scheme , top right) when
another Fe4S4 unit (P-cluster) transfers the
required number of electrons.[1,2] However, the modes of
N2 binding and the reaction paths of N2 reduction
by nitrogenase are still not clear. Several model Fe complexes have
been reported over the past two decades to shed light on the structure,
electronic properties, and reactivity of the nitrogenase enzyme.[7−27] Based on the experimental evidences, it has been concluded that
one of the six Fe centers that are bonded to the central C-atom is
expected to bind with N2 under reduced state with the cleavage
of one Fe–S bond. The coordination geometry of that particular
Fe center is speculated to be four, with an S2CN coordination
environment (Scheme ).[26] Recently, the group of Holland has
designed an S2(η2-CAr)-donor
ligand (Scheme ),
which has been further utilized for the syntheses of Fe(II/I/0) complexes.
Holland et al. experimentally observed that under reduced condition,
one Fe–S–Ar of the modelled complex is broken with the
formation of the Fe–N2 bond (Scheme ).[26] Very recently
they have suggested[26] that cleavage of
the Fe–S bond is more likely rather than elongation of the
Fe–Ccentral bond or dissociation of the Fe–Ccentral bond of the MoFe7S9C cluster
of the nitrogenase enzyme under reduced condition during binding of
N2 (Schemes and ).
Scheme 2
Speculated
N2 Binding by the Fe Center of the FeMoCo Cluster
of the Nitrogenase Enzyme (Top) and Previously Reported Model Complex[26] under Reduced State with Cleavage of the Fe–S
Bond
Scheme 3
Axial (Left; Fe–C Bond Elongation)
and Equatorial (Right)
N2 Bonding at the Fe Center of Nitrogenase
Syntheses of several modelled complexes have been reported,
having
M–N2 bonds for the purpose of dinitrogen reduction
to ammonia.[8−26] The importance of activation of the N2 bond has been
emphasized, and the extent of backdonation has been correlated with
υN–N IR stretching frequency. However, there
is no report of any theoretical study on estimation of the Fe–N2 interaction energy for efficient binding of the N2 molecule with the Fe center that could rationalize the syntheses
and characterizations of this class of complexes.Herein, we
report on the DFT, NBO, QTAIM, NICS calculations, and,
most importantly, EDA-NOCV analysis of previously reported dinitrogen-bonded
Fe0–N2 (1) and Fe+1–N2 (2) complexes[26,27] to give a deeper insight into the nature of Fe–N2 bonds and corresponding pairwise interaction energies. Interestingly,
nucleus-independent chemical shift (NICS) calculations even gave a
deeper insight into the extent of Fe → CAr backdonation
before and other binding with the N2 molecule.
Results and Discussion
Holland and co-workers have isolated and crystallographically characterized
N2-bonded Fe complexes catering to two different applications:[26,27] dianionic dithiolate Fe–N2 complex, designed to
mimic and explain the N2 binding of the nitrogenase enzyme,[26] and monoanionic L-Fe(N2)(Ph) [L =
β-diketiminate] complex, as an intermediate in the activation
of benzene and N2 leading to the formation of aniline derivatives,[27] which we designate as complexes A and B, respectively (Schemes and ). The Fe center of A is coordinated by two sulfur
and two carbon atoms of the η2-aryl ring, whereas
the Fe center of complex B is coordinated to two nitrogen
atoms of β-diketiminate and one carbon atom of the phenyl group.
Besides, the Fe atom of complex A interacts with the
π cloud of the aromatic carbon ring, while in complex B the Fe–C interaction is mostly a σ type (Scheme ). Despite their
structural differences, the precursors of both complexes A and B bind with N2 only under the reduced
condition at low temperatures to produce A–B,[26,27] which is similar to the FeMoco
cofactor of the nitrogenase enzyme.[26] However,
complex A deviates from the nitrogenase enzyme in the
Fe–C interaction (Fe···C2(Ar); Scheme ), where it is an
σ-type bond (complex B, Fe–Ph; Scheme right) in the latter
and a π type in the former (A). Both A and B show a pseudotetrahedral geometry at the iron
site after binding to N2. While the Fe–N bond distances
are 1.790–1.839 Å, the N–N bond lengths of pseudoterminally
bonded N2 are 1.131–1.136 Å in the reported
complexes A and B, respectively. Though
these two complexes have been intended for different applications,
the common theme they share is dinitrogen binding. Intrigued by this,
we have modelled and optimized simplified versions of the reported
complexes A and B, which we designate as
complexes 1 and 2 (Scheme ), respectively, to shed some light on the
strength of N2 binding to the Fe centers. We have optimized
complex 1 in both singlet and triplet electronic states,
while complex 2 was reported in the electronic quartet
state and also in doublet state, in both the gas phase and THF at
BP86-D3(BJ)/Def2TZVPP level (Scheme , Figure ). The details of the computational methods are provided in the Supporting Information. The calculations suggest
the energy of solvation as 127.4 (1) and 39.6 (2) kcal mol–1; the geometrical parameters
of the gas phase and THF optimized complexes are very close in both
gas phase and solution. Herein, we report the geometrical parameters
of the gas phase optimized structures. Complex 1 is comparatively
more stable in the triplet state by 7.35 kcal mol–1 in the gas phase and 6.93 kcal mol–1 in THF solution.
The authors have experimentally and theoretically proven the preference
for the triplet state geometry over the singlet state in the reported
complex A. However, in the case of complex 2, calculations suggest that doublet state is more stable than the
quartet state, by 6.4 kcal mol–1 in the gas phase
and 6.91 kcal mol–1 in THF. Although the energy
difference between the doublet and quartet states of complex 2 is small, we assume that it can exist in both states under
experimental conditions. The coordinated sulfur atoms of complex 1 are at a distance of 2.294–2.351 Å from the
Fe center with an S–Fe–S bond angle of 118.4°,
while the coordinated carbon atom of the aromatic ring is at a distance
of 2.039 (1) Å, which is very close to the experimental
values (2.037 (1), 2.049 (2) Å) of
original complexes A–B.[26,27] The optimized values correlate well with the reported Fe–S
(2.320(16)–2.355(16) Å) and Fe–C (2.037(5) (1) Å) distances and S–Fe–S bond angle of
114.3° (A)/118.4° (1) (Figure ). The Fe–C
distances of A are 2.037 and 2.24 Å, which are close
to those of 1 (2.05, 2.08 Å). The difference in
the second Fe–C bond length can be attributed to the steric
hindrance in A.[26]
Scheme 4
Simplified Structures
of Complexes 1 and 2 that Have Been Modelled
Figure 1
Optimized geometries
of complexes 1, 2 at BP86-D3(BJ)/Def2TZVPP
level of theory and of previously reported
complex B.
Optimized geometries
of complexes 1, 2 at BP86-D3(BJ)/Def2TZVPP
level of theory and of previously reported
complex B.The Fe(I) center (3d7) of complex 2 has
adopted a slightly distorted tetrahedral geometry. The deviation from
perfect tetrahedral geometry can lift the degeneracy of the t2g level of the Fe(I) ion. Hence, 2 has been optimized
in both quartet (S = 3/2; 2-quartet)
and doublet (S = 1/2; 2-doublet). The
coordinated nitrogen atoms of the ligand of 2-quartet (Scheme , Figure ) are equidistant
(1.969 Å) from the Fe center, with the N–Fe–N bond
angle of 96.9°. The Fe–CPh bond distance of 2-quartet is 2.022 Å. The optimized values concur well
with those of the experimentally reported Fe–N (2.036 Å)
and Fe–C (2.049 Å) bond lengths and the N–Fe–N
bond angle of 93.7° of B.[27] The slight widening of the S–Fe–S and N–Fe–N
bond angles in complexes 1 and 2-quatret from the reported bond angles is owing to the presence of less bulky
substituents, which reduces the steric repulsion (Figure ). The structures of 1, 2-quartet, and B with selected
bond parameters are given in Figure . The comparison between the bond parameters 2-quartet and 2-doublet clearly suggests that
the spin ground state of B is most likely 3/2 (quartet).
The Fe–NN2 (1.838 Å, B) bond length
is significantly farther from that of 2-doublet (1.737
Å), but rather closer to 2-quartet (1.824 Å).
Other Fe–NL bond distances of B are
little over 2 Å. The corresponding bond parameters of 2-doublet are significantly shorter than those of B/2-quartet. The bulky substitution (like Dip-group = 2,6-disiopropylphenyl)
on two N atoms of the β-diketiminate ligand (L) must have exerted
a significant amount of steric effect/distortion, leading to a quartet
as the ground state of 2. Structural optimization with
smaller substitutions (Me-group) at the BP86-D3(BJ)/Def2TZVPP level
of theory favors the doublet state (2-doublet) over the
quartet state (2-quartet) of 2.The
Fe–N2 bond length of complex 1 is slightly
shorter (1.801 Å) than that of complex 2 (1.824
Å). However, the N–N bond lengths of coordinated
N2 in both complexes 1 and 2 are
similar (1.147 Å) and are slightly elongated compared to the
N≡N bond length of free N2 (1.102 Å), suggesting
strong Fe → N2 backdonation. The Fe–N2 bond dissociation energies [(L)Fe–N2 →
(L)Fe + N2] of 1 and 2 are slightly
endothermic both in the gas phase (20.9 (1), 15.8 (2) kcal mol–1) and in THF (17.1 (1), 16.1 (2) kcal mol–1). The energy
of dissociation in the gas phase is 33.2 and 27.0 kcal mol–1 for 1 and 2, respectively.
Computational
Method
The EDA-NOCV method[28−37] is more appropriate in explaining the nature of the bond as one
of the major strengths of the method is its ability to provide the
best bonding model to represent the bonding situation in the equilibrium
geometry.[35,36] However, the EDA-NOCV analysis of paramagnetic
species is quite challenging as the main problem of EDA-NOCV calculations
of paramagnetic species is to reflect physically meaningful orbital
occupations in both possible situations: the bound complex and the
isolated fragments. Especially in complexes involving 3d metal ions,
it is a challenge to identify the d-orbitals with unpaired electrons
to achieve meaningful orbital occupations in the isolated fragments,
and thus in the bound complex, for accurate EDA-NOCV analysis.[37] The EDA-NOCV method[28−37] decomposes the intrinsic interaction energy (ΔEint) between two fragments into four energy components
as given belowwhere the electrostatic term (ΔEelstat) arises from the interpenetrating charges
of the nuclei of the two fragments that attract the electron cloud
of the opposite fragment, and the orbital term (ΔEorb) comes from the mixing and relaxation of the orbitals,
charge transfer, and polarization between the isolated fragments.
The dispersion energy (ΔEdisp) arises
from the noncovalent interactions, and, in particular, weak London
forces between the two interacting fragments. The above-mentioned
terms represent attractive forces; the Pauli term (ΔEPauli) arises due to the repulsion between the
same electron spins of the two fragments when sharing the same bonding
space. The corresponding deformation electron densities are represented
by the direction of the charge flow red → blue.[36] The N2 has been considered in singlet,
and ligand-Fe is either in S = 1 or in 1/2 or 3/2
spin state for our EDA-NOCV fragmentations and analyses.[37]We have employed charge and energy density
methods like natural
bond orbital (NBO), quantum theory of atoms in molecules (QTAIM),
and energy decomposition analysis coupled with natural orbitals for
chemical valence (EDA-NOCV) methods to study the nature of the Fe–N2 bond. The natural charge distribution of the dianionic dithiolate-Fe
complex, a precursor of complex 1, shows the concentration
of charge on the sulfur atoms and faint positive charge on the Fe
center. Upon binding to N2, the charge gets depleted on
the sulfur atoms, and rather charge concentration can be observed
on the Fe center and the otherwise neutral N2 (Table ). This indicates
the direction of charge flow (CAr)(S2) →
Fe → N2. On the contrary, for monoanionic [(NacNac)(C6H5)]Fe, the precursor of complex 2 shows a positive charge on the Fe center and a negative charge on
the ligand nitrogen atoms. However, after binding to N2, the shift of charge is much more akin to complex 1 and the charge flows in the direction (CPh)(N2)L → Fe → N2. The NBO calculation
suggests a Wiberg bond index of 0.96, 0.85 for Fe–N bond and
2.48 for N–N bond in complex 1 and 2, respectively.[26] The Fe–N and
N–N bond orders are consistent with the Fe–N and N–N
bond lengths in both the complexes. The decrease in N–N bond
order (BO) of N2 in complexes 1 and 2 compared to that of free N2 (BO = 3.03) indicates
the weakening of the N–N bond after complexation with metal,
which is crucial for the activation of N2. The α-SOMO
and α-SOMO–1 of complex 1 represent the
two unpaired electrons residing in d and d of the
triplet state (Figure S2), whereas α-SOMO,
α-SOMO–1, and α-SOMO–2 of complex 2 represent the three unpaired electrons residing in d, d, and d of the quartet
state (Figure S3). The unpaired electrons
show some interaction with the p orbitals of N2. The remaining
d-orbitals of both complexes 1 and 2 represent
π-interactions with the p orbitals of the dinitrogen.
Table 1
Partial Charges on Fe, N2, and S2 Atoms of Complexes 1, 2-quartet and
Their Precursors at the BP86/Def2-TZVPP Level of Theory
molecule
qFe
qN2
qS2/N2
CPh
complex 1
–0.158
–0.24
–0.194
–0.271
[S2Fe]2–
0.016
–0.350
–0.315
complex 2-quartet
+0.340
–0.26
–0.939
–0.256
[(NacNac)C6H5)Fe]−
+0.477
–1.07
–0.372
The AIM analysis shows solid paths (Figure S4) indicating the chemical bond between the Fe and N atoms.
The electron density ρ(r) at the bond critical
point (BCP) reflects the type of interaction and in turn the strength
of the bond. The considerable electron densities of 0.132 and 0.126
au (Table S1), which are in between 0.1
and 0.2 au,[38] indicate that Fe–N
bond is stronger than weak closed-shell interactions like ionic or
van der Walls, and weaker than electron sharing (covalent) interactions.
Complex 1 shows a slightly higher electron density ρ(r) than that of complex 2 and is consistent
with the Fe–N2 bond lengths. Another factor that
determines the type of interactions is the balanced ratio of positive
kinetic electron energy density (G(r)) and negative potential electron energy density (V(r)), given as −G(r)/V(r). A ratio greater
than 1.0 indicates noncovalent interactions and that less than 0.5
indicates covalent interactions, and the value in between 0.5 and
1 represents a partial covalent character.[38] Complexes 1 and 2-quartet show −G(r)/V(r) ratios of 0.857 and 0.843 (Table S1),
respectively, which demonstrate the partial covalent character of
the Fe–N2 bond. The negative total energy density
values (H(r)) also support the partial
covalent character of the Fe–N2 bond. The ellipticity
values are a measure of the bond order, and the ellipticity values
of 0.06 and 0.11 of complexes 1 and 2-quartet indicate a partial multiple bond character.Table provides
the EDA-NOCV results of the Fe–N bond of complexes 1 and 2-quartet calculated using dianionic [(S)2Fe]2– in electronic triplet state and neutral N2 fragment electronic singlet state as interacting fragments
for complex 1, and monoanionic [(NacNac)(C6H5)Fe]− in electronic quartet state,
doublet state, and neutral N2 fragment electronic singlet
state as interacting fragments for 2-quartet (Scheme ). A careful examination
of the molecular orbitals from NBO analysis helped in identifying
the orbitals with unpaired electrons (Figures S2 and S3). The instantaneous interaction (ΔEint) indicates the intrinsic strength of the bond. Complexes 1 and 2-quartet show almost similar instantaneous
interaction (−76.7, −76.9 kcal mol–1), albeit the slightly higher Pauli repulsion (8 kcal mol–1) in 2-quartet, while the intrinsic strength of complex 2-doublet is further reduced, probably owing to higher Pauli
repulsion. In addition, a higher electrostatic contribution (Table ) arises from the
difference in geometry. Note that the instantaneous interactions in 1 and 2-quartet are reasonably higher than the
bond dissociation energies, and the difference can be attributed to
the preparative energy. The preparative energies originate from the
modifications in the geometry of the fragments from their equilibrium
structure to the geometry in the compound, and also from the electronic
excitation to a reference state.
Table 2
EDA-NOCV Results at the BP86-D3(BJ)/TZ2P
Level of Fe–N2 Bonds of Complexes 1, 2-quartet, and 2-doublet Using Dianionic
[(S)2Fe]2– in Electronic Triplet State
and Neutral N2 Fragment Electronic Singlet State as Interacting
Fragments for Complex 1 and Monoanionic [(NacNac)(C6H5)Fe]− in Electronic Quartet,
Doublet States, and Neutral N2 Fragment Electronic Singlet
State as Interacting Fragments for Complex 2-quartet and 2-doublet, Respectivelya
energy
interaction
[(S)2Fe]2– (T) + [N2] (S) (1)
[(NacNac)(C6H5)Fe]− (Q) + [N2] (S) (2-quartet)
[(NacNac)(C6H5)Fe]− (D) + [N2] (S) (2-doublet)
ΔEint
–76.7
–76.9
–61.3
ΔEPauli
158.3
165.3
181.8
ΔEdispb
–6.4 (2.7%)
–4.5 (1.9%)
–5.3 (2.2%)
ΔEelstatb
–91.6 (39.0%)
–90.2 (37.2%)
–110.0 (45.2%)
ΔEorbb
–136.9 (58.3%)
–147.5 (60.9%)
–127.8 (52.6%)
ΔEorb(1)c
(L)Fe → N2 π backdonation
–53.3
(38.9%)
–70.2 (47.6%)
–67.1
(52.5%)
ΔEorb(2)c
(L)Fe → N2 π backdonation
–41.7
(30.5%)
–41.9 (28.4%)
–36.5
(28.6%)
ΔEorb(3)c
(L)Fe ← N2 σ backdonation
–30.7 (22.4%)
–23.0 (15.6%)
–17.4 (13.6%)
ΔEorb(4)c
(L)Fe ← N2 σ backdonation
–7.1 (4.8%)
ΔEorb(rest)c
–11.2 (8.2%)
–5.3 (3.6%)
–6.8 (5.3%)
Energies are in kcal mol–1.
The values in the parentheses show
the contribution to the total attractive interaction ΔEelstat + ΔEorb + ΔEdisp.
The values in parentheses show the
contribution to the total orbital interaction ΔEorb.
Scheme 5
Schematic Representations of the Fragments
with Corresponding Multiplicities
Considered for the EDA-NOCV Calculation
Energies are in kcal mol–1.The values in the parentheses show
the contribution to the total attractive interaction ΔEelstat + ΔEorb + ΔEdisp.The values in parentheses show the
contribution to the total orbital interaction ΔEorb.The orbital
(covalent) interactions are predominant and contribute
52.6–60.9% to the total attractive interactions in complexes 1, 2-quartet and 2-doublet, while
the electrostatic interactions contribute 37.2–45.2% and the
dispersion contributes 1.9–2.7% to the total attractive interactions
(Table ). The higher
orbital contributions indicate the covalent nature of the Fe–N
bond. The pairwise interactions, resulting from the breakdown of the
total orbital interactions, provide further insight into the type
of interactions. Table illustrates three pairwise contributions (ΔEorb(1–3)) for complex 1 and four pairwise
contributions (ΔEorb(1–4)) for 2-quartet. The largest orbital stabilization (ΔEorb(1)) comes from the Fe → N2 π electron backdonation followed by another Fe → N2 π backdonation (ΔEorb(2)) and Fe ← N2 σ electron donation (ΔEorb(3)) in complexes 1 and 2-quartet (Scheme ). Additionally, 2-quartet shows another weak
Fe ← N2 σ electron donation (ΔEorb(4)). The stronger Fe → N2 π backdonations contribute 69.4–76% to the orbital
interactions in both complexes 1 and 2-quartet and agree well with the charge distributions from the NBO analysis,
whereas Fe ← N2 σ electron donations contribute
20.4–22.4% and equate well with the bonding analysis of M–N
bonds in matrix isolated M(N2)8 (M = Ca, Sr,
Ba) complexes, where M–N bonds are dominated by M(dπ) → (N2) π backdonations from metal orbitals.[37a,39]
Scheme 6
σ-Donation and π-Backdonation in Complexes 1 and 2-quartet
See Figures and 3 and Table to obtain a quantitative
idea about the strengths of each bonding interaction.
σ-Donation and π-Backdonation in Complexes 1 and 2-quartet
See Figures and 3 and Table to obtain a quantitative
idea about the strengths of each bonding interaction.
Figure 2
Shape of the deformation
densities Δρ(1)–(3) that correspond
to ΔEorb(1)–(3), and the
associated MOs of [(S)2Fe)N2]2– (1) and the fragment orbitals of [(S)2Fe]2– in triplet state and N2 in the singlet
state at the BP86-D3(BJ)/TZ2P level. Isosurface values
of 0.003 au for Δρ(1–3). The eigenvalues
|ν| give the size of the charge
migration in e. The direction of the charge flow
of the deformation densities is red → blue.
Figure 3
Shape of the deformation densities Δρ(1)–(4) that correspond to ΔEorb(1)–(4), and the associated MOs of [(NacNac)(C6H5)Fe)N2]− (2-quartet) and the fragment
orbitals of [(NacNac)(C6H5)Fe]− in quartet state and N2 in the singlet state at the BP86-D3(BJ)/TZ2P
level. Isosurface values of 0.003 au for Δρ(1–4). The eigenvalues |ν| give the
size of the charge migration in e. The direction
of the charge flow of the deformation densities is red → blue.
The corresponding deformation densities Δρ(1–3/4) associated with ΔEorb(1–3/4) shown in Figures 2 and 3 reveal that the first Fe →
N2 π backdonation
Δρ(1) is from HOMO (1) and HOMO–1
(2-quartet) (d) orbitals
of Fe into the vacant degenerate π* orbital LUMO (1πg) of N2, whereas the second Fe → N2 π backdonation Δρ(2) is from HOMO–1
(1) and HOMO (2-quartet) (d) orbitals of Fe into the vacant degenerate π*
orbital LUMO′ (1πg′) of N2 (Scheme ). The third deformation density
Δρ(3) represents the Fe ← N2 σ electron donation from HOMO (3σg+; filled bonding σ2s* with the same
phase (+, +)) of N2, along with the slight polarization
(hybridization) within the fragment from d orbital (SOMO–1/SOMO–2) of
Fe into the vacant LUMO+6 and LUMO+1 orbitals of Fe in complexes 1 and 2-quartet, respectively. Besides the three
major deformation densities, complex 2-quartet shows
another weak deformation density Δρ(4), which
is similar in shape to Δρ(3), but the electron
donation is from HOMO–2 (2σu+; filled antibonding σ2s* with opposite
phase (+, −)) of N2 (Figure ; Scheme , top), which might have led to deviation of the Fe–N–N
angle (174°) from 180°. Complex 2-doublet shows
three pairwise contributions, which reveal stronger Fe → N2 π backdonations and slightly weaker Fe ← N2 σ donation (Table ) compared to that of the complex 2-quartet. The deformation densities of the complex 2-doublet can be seen in Figure S5.Shape of the deformation
densities Δρ(1)–(3) that correspond
to ΔEorb(1)–(3), and the
associated MOs of [(S)2Fe)N2]2– (1) and the fragment orbitals of [(S)2Fe]2– in triplet state and N2 in the singlet
state at the BP86-D3(BJ)/TZ2P level. Isosurface values
of 0.003 au for Δρ(1–3). The eigenvalues
|ν| give the size of the charge
migration in e. The direction of the charge flow
of the deformation densities is red → blue.Shape of the deformation densities Δρ(1)–(4) that correspond to ΔEorb(1)–(4), and the associated MOs of [(NacNac)(C6H5)Fe)N2]− (2-quartet) and the fragment
orbitals of [(NacNac)(C6H5)Fe]− in quartet state and N2 in the singlet state at the BP86-D3(BJ)/TZ2P
level. Isosurface values of 0.003 au for Δρ(1–4). The eigenvalues |ν| give the
size of the charge migration in e. The direction
of the charge flow of the deformation densities is red → blue.The aromaticity of the benzene/phenyl ring in complexes 1 and 2-quartet, their precursor complexes, and
ligands
has been measured by calculating the magnetic NICS, introduced by Schleyer et al.,[40] using the gauge-independent atomic orbital (GIAO)
approach at BP86/def2-TZVPP level on the geometries optimized at BP86-D3(BJ)/def2-TZVPP
level. The NICS method is considered as a popular probe of aromaticity
due to its ability to describe the aromaticity, antiaromaticity, and
non-aromaticity of ring systems both qualitatively and quantitatively.[41] The NICS values calculated at the geometric
centers of the ring are termed as NICS(0) and is considered as a measure
of the σ + π electron delocalization, whereas the values
calculated at 1 Å above the plane of the ring are designated
as NICS(1), which represents π-electron delocalization.[42]Negative NICS values specify aromaticity
and positive NICS values
indicate antiaromaticity, while values close to zero represent non-aromaticity.
A close inspection of the NICS values from Table shows that the aromaticity of the dithiolate
(S2)− ligand decreases on coordinating
to iron and then again increases upon interacting with N2 in complex 1. The reduction in the aromaticity on coordinating
to metal is comparable to that of metallabenzynes.[43]
Table 3
NICS(0/1) Results of 1, 2-quartet, and 2-doublet and Their Precursors
at the BP86/Def2TZVPP Level
compound
NICS(0)
NICS(1)
S2 ligand
–6.49
–7.92
[S2Fe]2–
–2.29
–1.72
complex 1
–8.03
–5.89
[(NacNac)C6H5)Fe]−
–4.79
–7.98
complex 2-quartet
–5.47
–8.63
complex 2-doublet
–5.02
–8.03
On similar lines, the precursor
of complex 2-quartet shows an increase in aromaticity
after binding to N2.
The decrease in the aromaticity of the fragments [S2Fe]− and [(NacNac)C6H5)Fe]− (Table ) can be
attributed to the backdonation from Fe into the π* orbital of
the aromatic carbon as expected. Olefins are often seen to form a
π-complex with the transition metals. The donor–acceptor
type bonds between metal-atom and olefins are speculated. However,
after binding to N2 the Fe → N2 π-backdonation
increases, which eventually changes the direction of charge flow from
C → Fe → N2 as shown by NBO calculations.
Additionally, the slight increase in Fe–C bond length (0.06
Å) after binding to N2 supports the change in the
direction of charge flow. This triggers the increase in aromaticity
in complexes 1 and 2-quartet as shown in Table . Scheme shows the location of NICS(0)
and NICS(1) in the molecules represented in Table . The NBO pictures (Figure ) of 1 and 2-quartet (right) showed the orbital interactions between the d-orbitals of
Fe atoms and the π-orbital of benzene/phenyl ring (double-headed
arrow). It is known that aromatic rings will possess a diamagnetic
ring current, while the antiaromatic and paramagnetic species will
induce a paramagnetic ring current under applied magnetic field. The
true picture of the aromaticity of the benzene/phenyl ring of these
two complexes could be even more complex than it appears. The bottom
point is that Fe-aromatic-ring interactions are somehow related to
the N2 (π-accepting ligand) binding similar to the
(benzene)–M(CO)–CO.
Scheme 7
Schematic Representation of NICS(0) and NICS(1) in the Molecules
Represented in Table
Pink point for NICS(0): a point
in the plane of the C6 ring. Blue point for NICS(1): a
point in the plane above/below the plane of the ring.
Figure 4
NBOs of
complex 1 (left) and 2-quartet (right) showing
the orbital interactions between Fe and the π-orbital
of the benzene/phenyl ring (double-headed arrow).
NBOs of
complex 1 (left) and 2-quartet (right) showing
the orbital interactions between Fe and the π-orbital
of the benzene/phenyl ring (double-headed arrow).
Schematic Representation of NICS(0) and NICS(1) in the Molecules
Represented in Table
Pink point for NICS(0): a point
in the plane of the C6 ring. Blue point for NICS(1): a
point in the plane above/below the plane of the ring.
Summary and Conclusion
In conclusion, we have reported
the EDA-NOCV and NICS analyses
of dithiolate-Fe0-N2 (1) and L-FeI(N2)(Ph) (2), which can be regarded
as model complexes with relevance to the nitrogen-fixing FeMoco cofactor
of the nitrogenase enzyme. The quantum mechanical calculations on 2 with smaller substitutions suggest that B (with
bulkier substituents on N atoms of L) is more likely to have a quartet
ground state than a doublet state. The calculations suggested the
endothermic dissociation of Fe–N2 bond [(L)Fe0/I–N2 → (L)Fe0/I + N2] in complexes 1–2. NBO calculations
indicate the direction of charge flow from metal to dinitrogen [(L)
→ Fe → N2], which rationalizes the activation
N≡N bond. The EDA-NOCV analysis shows higher orbital contributions,
indicating a higher covalent character than the ionic character of
the Fe–N2 bond. The pairwise orbital interactions
suggest that the combination of two π-backdonations [(d)Fe → (π*)N2] is much stronger than
σ-donation [(σ1s/2s)N2 →
(d)Fe], which has been schematically represented in Schemes and and pictorially/quantitatively displayed
in Figures and 3/Table . The ΔEint values of the
Fe–N2 bonds of these two complexes are in the range
of 76–77 kcal mol–1. Additionally, NICS calculations
suggest that the Fe(0/I) → C(π*; aromatic ring) π-backdonations
are significantly stronger before N2 binding (Table ). The computed σ-
and π-aromaticities corresponding to 1–2-quartet are significantly lower after dinitrogen binding due to the flow
of electron densities from the Fe centers to N2. However,
the complexes 1 and 2-quartet differ in
the magnitude of σ- and π-aromaticities due to the difference
in the position of the Fe atom and also oxidation state.
Authors: Gleb V Baryshnikov; Boris F Minaev; Michael Pittelkow; Christian B Nielsen; Roberto Salcedo Journal: J Mol Model Date: 2012-10-14 Impact factor: 1.810
Authors: Wenlong Yang; Kelsie E Krantz; Lucas A Freeman; Diane A Dickie; Andrew Molino; Gernot Frenking; Sudip Pan; David J D Wilson; Robert J Gilliard Journal: Angew Chem Int Ed Engl Date: 2020-02-03 Impact factor: 15.336