The binding of the dinitrogen molecule to the metal center is the first and crucial step toward dinitrogen activation. Favorable interaction energies are desired by chemists and biochemists to study model complexes in the laboratory. An electrochemically reduced form of a previously isolated sulfur-bridged Ni3S8 complex is inferred to bind N2 at multiple Ni centers, and this bonded N2 undergoes reductive protonation to produce hydrazine (N2H4) as the product in the presence of a proton donor. Density functional theory (DFT) calculations and quantum theory of atoms in molecules (QTAIM) analysis have been carried out to shed light on the nature of N2 binding to an anionic trinuclear Ni3S8 complex. Additionally, energy decomposition analysis with the combination of natural orbital for chemical valence (EDA-NOCV) analysis has been performed to estimate the pairwise interaction energies between the Ni center and the N2 molecule under experimental conditions.
The binding of the dinitrogen molecule to the metal center is the first and crucial step toward dinitrogen activation. Favorable interaction energies are desired by chemists and biochemists to study model complexes in the laboratory. An electrochemically reduced form of a previously isolated sulfur-bridged Ni3S8 complex is inferred to bind N2 at multiple Ni centers, and this bonded N2 undergoes reductive protonation to produce hydrazine (N2H4) as the product in the presence of a proton donor. Density functional theory (DFT) calculations and quantum theory of atoms in molecules (QTAIM) analysis have been carried out to shed light on the nature of N2 binding to an anionic trinuclear Ni3S8 complex. Additionally, energy decomposition analysis with the combination of natural orbital for chemical valence (EDA-NOCV) analysis has been performed to estimate the pairwise interaction energies between the Ni center and the N2 molecule under experimental conditions.
The binding of aerial
dinitrogen (N2) followed by its
reduction are some of the most important natural biochemical processes.[1−5] N2 is the most abundant gas in the earth’s atmosphere,
accounting for roughly 78% of all components. The respiratory process
involves O2 despite such a high abundance of N2 in the earth’s atmosphere, owing to the kinetic inertness
of the N≡N bond. Furthermore, the nonpolar N2 molecule
possesses two deep-lying pairs of electrons (:N≡N:) making
N2 itself a poor donor ligand.[6] Sulfur-bridged molybdenum-iron (MoFe7S9C1–)-based nitrogenase enzymes (FeMoco) can bind aerial
N2 under a reduced state and catalyze reduction leading
to the formation of ammonia.[1−3,5] It
should be noted that active binding sites of metalloenzymes Ni-superoxide
dismutase[7,8] and Ni–Fe hydrogenase[9,10] possess S-donor bridges. The metal ion-containing inorganic units
are well protected by the proteins that surround them to prevent them
from undergoing undesired oxidation reactions.[1] Chemists and biochemists have come up with the syntheses, isolations,
and characterizations of several model complexes to study their electronic
structures and chemical properties under different conditions, including
binding with CO and N2.[11−30] The redox properties have been often studied using cyclic voltammetry.
Over the last decade, there has been a significant increase in research
efforts focused on N2 binding at metal (M) centers, followed
by activation of the N≡N bond via reductive protonation.[15] Several metal complexes, which possess a bond
with N2 in the reduced oxidation state of M, have been
isolated, characterized, and further studied using spectroscopic techniques
(M = Fe, Mo, Os, Ru, Re, etc.).[11−18] The reductive protonation of N2 can lead to the formation
of either ammonia (NH3) or hydrazine (N2H4) or sometimes a mixture of both.[11−30] These reports mostly focus on changes in N–N bond orders,
which are computed by estimating Wiberg bond order P(N–N) values
to compare them to experimentally determined N–N bond lengths.[15,17,24−26] Authors of
these previous reports have often pointed out that π back-donation
from metal to N2 (M → N2) is crucial
for the weakening of the N≡N bond. The reductive electron transfer
from external reducing agents to the metal center is very important.
The higher the accumulation of electron densities on metal atoms,
the higher the π back-donation from metal to N2 (Scheme ).[17,24−26] In recent times, there have been several reports
on the first-row transition metal-based dinitrogen activation (M =
V, Fe, Ni, Co, Ni, Cu).[27] Very recently,
N2 binding has been reported to take place at the electron-deficient
boron center of boron-cyclic-alkyl-amino-carbene compounds.[28] Moreover, reductive protonation leading to the
formation of NH3 has been successfully achieved.[28] These boron compounds are highlighted to be
equivalent to metal complexes that can perform a similar job.[29] However, there is no report on the estimation
of M–N2 interaction energies showing the extent
of π back-donation from M → N2 and σ-donation
from N2 → M (M = transition metal).[30] The N≡N bond of the free dinitrogen (N2) is quite strong. The energy decomposition analysis with the combination
of natural orbital for chemical valence (EDA–NOCV) analysis
of free N2 molecule showed that 30% of the total interaction
energy between two interacting N atoms is only contributed by electrostatic
energy (ΔEelstat) and the remaining
70% is orbital interaction energy (ΔEorb).[6b] The charge separation (q) and dipole moment (μ) are zero. The Pauli repulsion energy
(ΔEPauli) between two interacting
N atoms is quite high, preventing the two nuclei from further coming
closer (dN—N = 1.102 Å). The
Wiberg bond order P(N–N) has been estimated to be 3.03. The
orbital interaction energy (ΔEorb) is further split into two parts [for σ(3σg+) + π(1πu) orbitals]. The σ
interaction is 65.6% while the π-interaction is nearly half
(34.4%). These two interactions (σ + π) combined to give
the total orbital interaction energy (ΔEorb).[6b] Most importantly, doubly
degenerate π*-orbitals (1πg) of N2, which are composed of the p and p atomic orbitals of two interacting N atoms,
are quite high in energy (1πg; lowest unoccupied
molecular orbital (LUMO)). The LUMO + 1 is 3σu+, and the highest occupied molecular orbital (HOMO) is N–N
σ(3σg+) orbital.[6b]
Scheme 1
Interacting Orbitals between Metal (M) and N2
It has been often found that
the reductive protonation of (L)M(N2) can lead to the formation
of NH3 or N2H4 under mild conditions.[31−34] The latter’s enthalpy of formation is known to be endothermic
by +159.2 kJ mol–1, whereas that of the former is
exothermic. Furthermore, a huge amount of energy is stored in N2H4, which can be released by both chemical and
electrochemical methods without any energy barrier. Hydrazine is utilized
as rocket fuel due to its very high energy storage density [1.5368
× 1010 J m–3/4269 Wh L–1 (chemical/electrochemical)].[35−37] Recently, an isolated U-shaped
dianionic complex (LS2)4Ni(II)32– (LS22– = –S–(CH2)3–S–) (abbreviated as Ni3S8 complex)[38] has been shown to electrochemically produce
hydrazine (N2H4) in the presence of PhOH as
a proton donor. There is no illustration or research on N2 binding and its electrochemical reduction processes. Herein, we
report density functional theory (DFT), quantum theory of atoms in
molecules (QTAIM), and EDA–NOCV calculations[39−48] to shed light on the binding of N2 at the Ni center.
We have further investigated the bonding scenarios and estimated the
pairwise interaction energies between the electrochemically reduced
(NiII → NiI) Ni center and N2 molecules.
Results and Discussion
The dianionic
complex Ni3S8 [(LS2)4Ni(II)32–; (LS22– = –S–(CH2)3–S–)] has been previously characterized
using X-ray single-crystal diffraction.[38] This anionic trinuclear Ni(II)-based complex is composed of three
Ni(II) ions and four dianionic S-donor ligands (LS22–). The central Ni(II) [NiC] is connected
to two terminal Ni(II) centers [NiT] by four μ–SL bridges (Scheme , left). All three Ni(II) ions have adopted a distorted square
planar geometry. The Ni–S bond lengths range from 2.202(3)
to 2.265(3) Å. The S–Ni–S angles around the square
planar NiC center are 78.49/78.55° and 101.17/101.81°
while the corresponding angles around the two NiT centers
are 76.16–76.66/93.76–99.22° and 94.86–95.49/92.33–92.68°.[38] The deviation from the regular square planar
geometry of central NiC is greater than those of terminal
NiT centers (Scheme , left). The NiT–NiC distances
are 2.9161(19)–2.9396(19) Å. The six-membered (LS2)Ni(II) unit can have different conformations (distorted chair
and boat similar to cyclohexane). The cyclic voltammetry (CV) measurement
in tetrahydrofuran (THF) showed two reduction processes −2.20
and −2.40 V vs fc+/fc under both argon and dinitrogen
atmospheres in the absence of a proton source, suggesting the reduction
of square planar NiII ion to paramagnetic NiI ion [(LS2)4Ni(II)32– + e– → (LS2)4Ni(II)2Ni(I)3–].[38] The
electrochemical formation of tetra-anion [(LS2)4Ni(II)2Ni(I)3– + e– → (LS2)4Ni(II)Ni(I)24–] at −2.40 V cannot be excluded either. Interestingly,
these two values are reported to shift to −2.35 and −2.85
V vs fc+/fc, respectively, under the N2 atmosphere
in the presence of PhOH, suggesting possible H-bonding interactions
between H–OPh and S-atoms of the dianionic complex.[38] However, its mononuclear Ni(II) analogue does
not show electrochemical N2 reduction.[38]
Scheme 2
Proposed Scheme of N2 Binding to the Ni3Si8 Unit of Complex (LS2)4Ni(II)32–[39]
We have performed geometry
optimization of the dinitrogen-encapsulated
dianionic (Ni3S8)N2 complex (1) containing three Ni(II) centers in its singlet and triplet
states at the BP86-D3(BJ)/Def2TZVPP level of theory [1 = (LS2)4(N2)Ni(II)32–; LS22– = –S–(CH2)3–S–] (Schemes and ). The singlet state of 1 is more stable than its triplet state by 30.3 kcal mol–1. The binding of dinitrogen molecule (N2) to the trinuclear (LS2)4(N2)Ni(II)32– complex in an end-on/side-on fashion
to the central Ni and charge donations from the two terminal Ni atoms
has been previously shown, as presented in Scheme A,B.[38]
Scheme 3
Structures
of Optimized Geometries of Dianionic Singlet (Complex 1) and Trianionic Doublet States with End-On (2) and
Side-On (3) Overlap of the (Ni3Si8)N2 Complex
We tried to optimize the singlet-state (LS2)4(N2)Ni(II)32– in end-on (A) and side-on (B) fashions as shown in Scheme . Eventually, the
side-on (B) input geometry led to optimization in the
end-on mode (A). We further performed the geometry optimization
of the singlet state in an end-on and side-on fashion at the M06-2x-D3
level using the Def2TZVPP basis set (see the Supporting Information). The calculations at M06-2x-D3/Def2TZVPP also
suggest the preference for the end-on position (A). The
optimized geometries of singlet states both at the BP86-D3(BJ) and
M06-2x-D3 levels show that the N2 does not bind to the
central Ni(II) center and instead stays aloft within the cavity of
the complex at a distance of 3.55 Å from the central Ni(II) (NiC) and 3.03–3.54 Å from the two terminal Ni atoms
(NiT). Figure shows that one of the N atoms of N2 is significantly
close to the left-sided terminal Ni(II) center (3.03 Å), suggesting
a slightly higher preference for the terminal Ni(II) center over the
central Ni(II) center. The distance between the two terminal Ni atoms,
NiT–NiT (Scheme ), in the singlet-state optimized structure
is 5.22 Å (gas phase) and 5.09 Å (THF), which is slightly
longer than the NiT–NiT distance of 4.90
Å in the experimentally reported[39] crystal structure of the original dianionic Ni3S8 complex [(LS2)4Ni(II)32–; Scheme , left] containing H-bonded (LS2···H–O–H)
water molecules inside the cavity. This implies the slight widening
(0.19 Å in THF) of the cavity to facilitate the interaction of
N2. The bridging sulfur (SB) atoms of the ligand
(LS22–) are at a 2.20 Å distance
from the central Ni(II) (NiC) and 2.25–2.27 Å
from the two terminal Ni atoms (NiT), while the terminal
sulfur atoms (ST) are at a distance of 2.20–2.21
Å from the terminal Ni atoms (NiT) (Figure ). The values correlated well
with the experimental values of 2.18–2.20 Å for NiC–SB, 2.23–2.26 Å for NiT–SB, and 2.18–2.21 Å for NiT–ST in the original N3S8 cluster.[39] Referring to Figures and S1, the values calculated at BP86-D3(BJ)/Def2TZVPP matched well with
the experimental values compared to those calculated at M06-2x-D3/Def2TZVPP.
Hence, we further report only the values calculated at the BP86-D3(BJ)
level. The authors showed that the Ni3S8 complex
under a N2 atmosphere electrocatalytically reduced N2 at −2.35 V in the presence of a proton source (PhOH)
representing the nitrogen reduction reaction (NRR). We attempted to
optimize the dianionic and diamagnetic (Ni3S8)N2 complex [(Ni3S8)N2 (1) + e– → 2 or 3] as a radical anion by adding one electron. This represents
one-electron reduction in both end-on and side-on modes of N2 binding to the central Ni atom (A and B). To our surprise,
the optimization in the end-on fashion resulted in a geometry (Figure and Schemes and ) with N2 bonded to central NiC (complex 2), while the optimization in the side-on
fashion resulted in N2 bonded to one of the terminal NiT atoms (complex 3) rather than the central Ni
as shown in Scheme in the gas phase. However, the optimization of complex 3 in THF did not lead to N2 binding to the terminal Ni
and instead, it stayed in the cavity, similar to complex 1. The N2 binding to the original Ni3S8 complex occurs only under the electrochemically reduced condition,
which is analogous to the nitrogenase FeMoco cofactor. Under the resting
state of the nitrogenase enzyme, the FeMoco cofactor does not bind
to N2 and rather binds only under reduced conditions.[1−3,5] Our calculations suggest that
the cavity further expands on the direct binding of N2 with
Ni, as shown by the NiT–NiT distances
of 5.84 Å (gas) and 5.81 Å (THF) in complex 2 and 6.16 Å in complex 3 (gas). Ni(I)C of 2 is 0.72 Å above the S4 plane,
and the Ni(I)C–S bond lengths in 2 significantly
increase, whereas Ni(I)T of 3 is 0.20 Å
above the S4 plane, and the Ni–S distances around
Ni(I)T of 3 increase slightly. Energetically,
one-electron reduction of 1 leading to 2 is favored by −23.1 kcal mol–1 (ΔG298) in THF. This is the electron affinity value
of 1. In comparison, the same process is highly endothermic
(+117.0 kcal mol–1) in the gas phase, suggesting
a favorable stabilizing ion–dipole interaction between the
complex and the THF solvent molecules (Scheme S1). The dissociation of N2 is slightly exothermic
for both complexes 2 and 3 and the exothermicity
is relatively higher in reduced complex 2 (ΔG298 = −13.5 kcal mol–1) than in complex 3 (ΔG298 = −1.13 kcal mol–1) in the gas phase. Energetically,
complex 3 is relatively more stable than complex 2 by 11.1 kcal mol–1 (gas). We have also
evaluated the complexes under study for the presence of a multireference
character by performing coupled-cluster calculations on the optimized
geometries. The calculations showed T1 diagnostics of 0.04, 0.038,
and 0.043 for complexes 1, 2, and 3, respectively, revealing the absence of a multireference
character.[49]
Figure 1
Optimized geometries
of dianionic singlet (complex 1) and trianionic doublet
states with end-on (2) and
side-on (3) N2-bonded (Ni3Si8)N2 complexes at the BP86-D3(BJ)/Def2TZVPP level.
Wiberg bond order P(N–N) values: 2.95 (1), 2.63,
(2) and 2.79 (3).
Optimized geometries
of dianionic singlet (complex 1) and trianionic doublet
states with end-on (2) and
side-on (3) N2-bonded (Ni3Si8)N2 complexes at the BP86-D3(BJ)/Def2TZVPP level.
Wiberg bond order P(N–N) values: 2.95 (1), 2.63,
(2) and 2.79 (3).
Computational
Method
The above observations made us curious about the nature
of the
Ni–N2 bond in such complexes. We have employed charge
and energy density methods such as natural bond orbital (NBO), quantum
theory of atoms in molecules (QTAIM), and energy decomposition analysis
coupled with natural orbitals for chemical valence (EDA–NOCV)[6] methods to study the nature of the Ni–N
bond in the gas-phase optimized geometries. The details of the methods
are provided in the Supporting Information. The EDA–NOCV method is more appropriate in explaining the
nature of the bond as one of the major strengths of the method is
its ability to provide the best bonding model to represent the bonding
situation in the equilibrium geometry. The EDA–NOCV method
involves the decomposition of the intrinsic interaction energy (ΔEint) between two fragments into four energy
components as followswhere the electrostatic term (ΔEelstat) is from the interpenetrating charges
of the nuclei of the two fragments that attract the electron cloud
of the opposite fragment and the orbital term (ΔEorb) is from the mixing and relaxation of the orbitals,
charge transfer, and polarization between the isolated fragments.
The dispersion term (ΔEdisp) is
from the noncovalent interactions and, in particular, weak London
forces between the two interacting fragments. While the above three
terms constitute attractive forces, the Pauli term (ΔEPauli) arises due to the repulsion between the
same electron spin of the two fragments. All four terms are represented
as the difference between the two interacting fragments before and
after bond formation. The corresponding deformation electron densities
are represented by the direction of the charge flow red → blue.
See the Supporting Information for the
detailed computational part.The natural charge from NBO analysis
of (LS2)4(N2)Ni(II)32– (1; Ni3S8N2) shows that the total
charge on three Ni atoms decreases upon interacting or binding to
N2. The slight decrease in charge in the singlet complex
indicates that N2 interacts with the Ni atoms through the
electron clouds, and the decrease in charge is more prominent when
N2 is directly bound to Ni as in reduced complexes 2 and 3 (Figures S5–S8). Similarly, charge dipoles are created on the otherwise neutral
N2 unit upon interacting or binding with Ni, suggesting
a charge flow from Ni → N2 (Table S1). The results suggest a Wiberg bond order of 2.95
for N2 in the encapsulated resting complex 1, 2.63 in the reduced trianionic complex 2 with end-on
bonded N2 at the central Ni(I) ion, and 2.79 in the reduced
trianionic complex 3 with side-on bonded N2. The reduced bond orders compared to that of free dinitrogen (3.03)
correlated well with the N–N bond lengths in complexes 1, 2, and 3 (Figure ) and indicated the weakening of the N–N
bond, which is a crucial step in the activation of N2.
The α-SOMO-2 of the radical anion complex (3) with
side-on overlap represents the π interaction between the d orbital of Ni and the p orbital of N2, while α-SOMO-3 indicates
the σ interaction between the d2 orbital of Ni and the p orbital of N2 (Figure S4).
The molecular orbital analysis of the alternative reduced complex
(2) with N2 bonded to the central Ni in an
end-on fashion shows three π interactions represented by α-SOMO-2,
α-SOMO-8, and α-SOMO-9 and one σ interaction indicated
by α-SOMO-1 (Figure S3). The calculations
suggest a Wiberg bond order of 0.70 for the NiC–N
bond in complex 2 with an electron occupancy of 0.98
e, which is highly polarized toward N (88%), and 0.30 for the Ni–N
bond in complex 3 (Table S2). The calculations did not provide bond occupancy for the Ni–N
bond in complex 3. The AIM analysis shows solid bond
paths for the Ni–N bond for both complexes 2 and 3 supporting the direct bonding of N2 with Ni (Figure S10). The calculations suggest considerable
electron density (ρr) at (3, −1) bond critical
point (BCP) for complex 2 and a very low electron density
at BCP for complex 3 (Table S3). The difference in electron densities at BCPs can be related to
shorter and longer Ni–N bond lengths in complexes 2 and 3, respectively (Figure ).We have considered the trianionic
reduced Ni3S8 fragment in doublet state and
the neutral N2 fragment
in singlet state for the EDA–NOCV method to give the best bonding
description. The isomeric reduced complex 2 shows a higher
intrinsic interaction (24.0 kcal mol–1) than complex 3 (13.8 kcal mol–1), due to an increase
in electrostatic contribution and a slight reduction in the orbital
contribution of complex 2 relative to that of complex 3 (Table ).
The low intrinsic interaction of the reduced complex 3 (Table ) correlates
well with the long Ni–N bond length (2.447 Å) (Figure ). The total orbital
interactions contribute a major 45.5% to the total attractive interactions,
while the electrostatic interactions contribute 38.7%. The dispersion
interactions also play a major role in stabilizing the Ni–N
bond by contributing not-very-less 15.8% of total attractive interactions.
While the electrostatic contributions in 2 provide 50.5%
of the total attractive interactions, the orbital interactions contribute
44.5% and the contribution of dispersion interactions is rather small
(5.0%). Based on the abovementioned contributions, it can be inferred
that the Ni–N bond is slightly more covalent in complex 3, whereas it is slightly more electrostatic in complex 2 (Table ).
The EDA–NOCV results of complex 2 optimized in
THF are almost similar to calculations on the gas-phase optimized
geometry with a minor difference of around 2 kcal mol–1 lower than the gas-phase calculations (Table S4).
Table 1
EDA–NOCV Results at the BP86-D3(BJ)/TZ2P
Level of Ni3Si8–N2 Bonds of
[(Ni3Si8)N2]•– Radical Anion Complexes (2 and 3) Using
Singly Charged [Ni3Si8]•– in the Electronic Doublet State and the Neutral N2 Fragment
Electronic Singlet State as Interacting Fragmentsc
energy
interaction
[Ni3Si8]•– (D) + [N2] (S) end-on (2)
[Ni3Si8]•– (D) + [N2] (S) side-on (3)
ΔEint
–24.0
–13.8
ΔEPauli
164.2
40.0
ΔEdispa
–9.5 (5.0%)
–8.5
(15.8%)
ΔEelstatb
–95.0
(50.5%)
–20.8 (38.7%)
ΔEorbb
–83.7 (44.5%)
–24.5
(45.5%)
ΔEorb(1)b
Ni3Si8–N2 σ polarization
–26.3 (31.5%)
Ni3Si8 → N2 π back-donation
–16.4 (67.0%)
ΔEorb(2)b
Ni3Si8 ← N2 σ donation
–6.0 (7.1%)
–2.7 (11.0%)
ΔEorb(3)b
Ni3Si8 → N2 π back-donation
–24.7
(29.5%)
Ni3Si8 → N2 π back-donation
–2.3
(9.4%)
ΔEorb(4)b
Ni3Si8 → N2 π back-donation
–20.1 (24.0%)
ΔEorb(rest)b
–6.6 (7.9%)
–3.1
(12.6%)
The values in parentheses show the
contribution to the total attractive interaction ΔEelstat + ΔEorb + ΔEdisp.
The values in parentheses show the
contribution to the total orbital interaction ΔEorb.
Energies
are in kcal mol–1.
The values in parentheses show the
contribution to the total attractive interaction ΔEelstat + ΔEorb + ΔEdisp.The values in parentheses show the
contribution to the total orbital interaction ΔEorb.Energies
are in kcal mol–1.The pairwise breakdown of total orbital interactions
provides further
insight into the nature of the bonding (Table ). The deformation densities and associated
molecular orbitals of the fragments, as shown in Figures and 3, illustrate the type of interactions and the direction of charge
flow from red → blue. The first orbital term ΔEorb(1) of complex 3 represents
π back-donation from the d2 orbital of Ni into the vacant π(p)* orbital of N2 (d2(Ni) → πN2*) and contributes
67% of the total orbital interactions. The second orbital term ΔEorb(2) indicates σ electron donation from
(3σg+) HOMO of N2 into the
high-lying vacant orbital of Ni (N2 → Ni) contributing
11% to the total orbital interactions, whereas the third orbital term
ΔEorb(3) represents π back-donation
from the d orbital of Ni into the vacant
LUMO’ π(p)* orbital of N2 (d(Ni) → πN2*), which contributes 9.4% to the total orbital interactions.
Note that the isosurface values for ΔEorb(2-3) are smaller than those of ΔEorb(1) because otherwise, the minor contributions of the
metal atomic orbitals would not be visible (Figure ). The π back-donations from metal
orbitals (Ni → N2) are significantly stronger than
σ donation from N2 to Ni (N2 →
Ni) in complex 3. The bent orientation of N2 in complex 3 makes the π donation possible from
Ni → N2.
Figure 2
Shape of the deformation densities Δρ(1)–(3) that correspond to ΔEorb(1)–(3) and the associated MOs of [(Ni3Si8)N2]•– (3) and the fragment orbitals
of [Ni3Si8]•– in doublet
state and N2 in the singlet state at the BP86-D3(BJ)/TZ2P
level. Isosurface values of 0.003 au for Δρ(1) and 0.0003 au for Δρ(2–3). The eigenvalues
|ν| give the size of the charge
migration in e. The direction of the charge flow
of the deformation densities is red → blue.
Figure 3
Shape of the deformation densities Δρ(1)–(4) that correspond to ΔEorb(1)–(4) and the associated MOs of [(Ni3Si8)N2]•– (2) and the fragment orbitals
of [Ni3Si8]•– in doublet
state and N2 in the singlet state at the BP86-D3(BJ)/TZ2P
level. Isosurface values of 0.003 au for Δρ(1–4). The eigenvalues |ν| give the
size of the charge migration in e. The direction
of the charge flow of the deformation densities is red → blue.
Shape of the deformation densities Δρ(1)–(3) that correspond to ΔEorb(1)–(3) and the associated MOs of [(Ni3Si8)N2]•– (3) and the fragment orbitals
of [Ni3Si8]•– in doublet
state and N2 in the singlet state at the BP86-D3(BJ)/TZ2P
level. Isosurface values of 0.003 au for Δρ(1) and 0.0003 au for Δρ(2–3). The eigenvalues
|ν| give the size of the charge
migration in e. The direction of the charge flow
of the deformation densities is red → blue.Shape of the deformation densities Δρ(1)–(4) that correspond to ΔEorb(1)–(4) and the associated MOs of [(Ni3Si8)N2]•– (2) and the fragment orbitals
of [Ni3Si8]•– in doublet
state and N2 in the singlet state at the BP86-D3(BJ)/TZ2P
level. Isosurface values of 0.003 au for Δρ(1–4). The eigenvalues |ν| give the
size of the charge migration in e. The direction
of the charge flow of the deformation densities is red → blue.The pairwise breakdown of orbital interactions
in complex 2 reveals that the first orbital term ΔEorb(1) denotes σ polarization between
the d2 orbital of Ni and the
(3σg+) HOMO of N2, while the
second orbital
term ΔEorb(2) represents σ
electron donation from the sigma (ungerade) orbital of N2 into the LUMO + 4 orbital of Ni, together contributing 38.6% to
the total orbital interactions (Figure ). Whereas the third ΔEorb(3) and fourth orbital terms ΔEorb(4) represent π back-donations from d and d orbitals of
Ni into vacant π(p)* and π(p)* orbitals of N2, respectively,
together contributing 53.5% of the total orbital interactions. The
π back-donations from metal orbitals are stronger than those
of σ donations from N2 in complex 2 and
is in good agreement with the bonding analysis of M–N bonds
in matrix-isolated triplet M(N2)8 (M = Ca, Sr,
Ba) complexes where N–N bonds are dominated by [M(dπ)] → (N2)8 π back-donations from
metal orbitals.[30] The stronger π
back-donations in complexes 2 and 3 agree
well with the charge distribution and reduced Wiberg bond orders from
NBO analysis. The deformation densities correlated well with the MOs
of complexes 2 and 3.Our further
calculations suggest that the proton on the N2 unit of 2 or 3 species jumps to one of
the ST atoms with the dissociation of N2 from
the Ni center. Hence, it is proposed that further reduction intermediate
of 2 or 3 species is inferred, leading to
the formation of a doubly reduced tetraionic complex 4 with two Ni(I) centers (one NiT and NiC).
Conclusions
In conclusion, we carried out quantum chemical calculations on
the U-shaped sulfur-bridged dianionic diamagnetic Ni3S8 complex to understand the nature of N2 binding
under electrochemical conditions. The calculations suggest that the
encapsulation of one N2 molecule in the cavity is energetically
favorable. The left-to-right arm length of the U-shape complex changes
on N2 encapsulation. The binding of N2 at the
triplet state of the Ni3S8 complex costs 30
kcal mol–1, which is not feasible under the resting
state of this complex. Under electrochemical conditions, N2 can bind either at the central Ni(I) (2) or terminal
Ni(I) (3) ion at −2.40 V in the presence of PhOH.
The Wiberg bond order decreases from 3.03 in free N2 to
2.95 in N2-encapsulated resting complex 1,
2.63 in reduced trianionic complex 2 with end-on bonded
N2 at the central Ni(I) ion, and 2.79 in reduced trianionic
complex 3 with side-on bonded N2. The Ni–N
distance is significantly shorter in 2 than in 3, and the overall Ni–N interaction energy is higher
in 2 (with end-on bonded N2) than in 3 (with side-on bonded N2). Complex 2 shows higher electrostatic contribution and a slight reduction in
the orbital contribution relative to that of complex 3. However, the magnitude of the orbital interaction energy is higher
in 2 than that of 3. The EDA–NOCV
results reveal that the Ni–N bond is slightly more covalent
in complex 3, whereas it is slightly more electrostatic
in complex 2. Additional calculation shows that the protonation
of 2/3 leads to the dissociation of the
N2 molecule from the reduced complex, and hence, it is
suggested that the tetra-anionic form of the Ni3S8 complex is more likely (Scheme ) to undergo protonation toward the electrochemical
formation of N2H4 either in a “distal”
or in an “alternating” pathway.[1,15,23] In both the complexes, π back-donation
from nickel to N2 (M → N2) is much stronger
than dinitrogen-to-nickel (N2 → M) σ-donation,
although Yamabe et al. suggested the opposite 4 decades ago.[50] Previously, only one paramagnetic Ni-containing
zeolite has been studied by ETS–NOCV toward end-on O2 binding.[51] The EDA–NOCV analysis
reveals the stability of complex 2 over complex 3. Energetically, one-electron reduction of 1 leading to 2 is also favored by −23.1 kcal mol–1 (ΔG298) in THF.
Scheme 4
Most Plausible Mechanism
for the N2 Binding of the Ni3S8 Dianionic
Complex under Electrochemical Reduced
Conditions [Ni3S8 + N2 → 1 + e–→ 2/3 + e– → 4]
Violet
Ni atoms are Ni(I).
Most Plausible Mechanism
for the N2 Binding of the Ni3S8 Dianionic
Complex under Electrochemical Reduced
Conditions [Ni3S8 + N2 → 1 + e–→ 2/3 + e– → 4]
Authors: S B Choudhury; J W Lee; G Davidson; Y I Yim; K Bose; M L Sharma; S O Kang; D E Cabelli; M J Maroney Journal: Biochemistry Date: 1999-03-23 Impact factor: 3.162
Authors: David P Barondeau; Carey J Kassmann; Cami K Bruns; John A Tainer; Elizabeth D Getzoff Journal: Biochemistry Date: 2004-06-29 Impact factor: 3.162