| Literature DB >> 34924963 |
Jacob A Jezovit1, Nawar Alwash1, Joel D Levine1,2,3.
Abstract
Many animals live in groups and interact with each other, creating an organized collective structure. Social network analysis (SNA) is a statistical tool that aids in revealing and understanding the organized patterns of shared social connections between individuals in groups. Surprisingly, the application of SNA revealed that Drosophila melanogaster, previously considered a solitary organism, displays group dynamics and that the structure of group life is inherited. Although the number of studies investigating Drosophila social networks is currently limited, they address a wide array of questions that have only begun to capture the details of group level behavior in this insect. Here, we aim to review these studies, comparing their respective scopes and the methods used, to draw parallels between them and the broader body of knowledge available. For example, we highlight how despite methodological differences, there are similarities across studies investigating the effects of social isolation on social network dynamics. Finally, this review aims to generate hypotheses and predictions that inspire future research in the emerging field of Drosophila social networks.Entities:
Keywords: Drosophila; machine vision; neurogenetics; pheromones; social networks
Mesh:
Year: 2021 PMID: 34924963 PMCID: PMC8683092 DOI: 10.3389/fncir.2021.755093
Source DB: PubMed Journal: Front Neural Circuits ISSN: 1662-5110 Impact factor: 3.492
FIGURE 1Visualization of the methods involved in acquiring Drosophila social networks. (A) First videos with a specific number of flies confined in an arena are acquired and the position, orientation and identity of each fly is tracked with machine vision software (e.g., Ctrax). This information acquired from tracking can be used to calculate a variety of behavioral element measures such as the average locomotor activity of the flies. To generate networks, criteria that define a directed interaction are necessary. Typically, three parameters are used: (i) the angle connecting the center of the interactee fly relative to the interactor fly (shown with red arrows); (ii) the distance between the two flies’ center of mass; and (iii) how long these conditions must be maintained for. The criteria can be defined manually, based on observation (fixed criteria) or automatically computed through a published algorithm (automated criteria; see Schneider and Levine, 2014). Once the criteria are selected, social networks can be generated each time they are met in the tracked videos. Networks can be computed with the following properties: (i) directed - the directionality of incoming or outgoing interactions are recorded; (ii) undirected – the directionality of interactions are not recorded; (iii) weighted – interactions are weighted to reflect the strength or frequency of interactions between nodes; (iv) unweighted - networks are binary and only consider the presence or absence of interactions between individuals. (B) Visualization of static networks, a conventional form of SNA where every observed social interaction within a video sequence is combined into a single, large social network that encompasses the entire history of social interactions. To avoid saturation of node connections, static networks can be weighted. (C) Visualization of the iterative network method (published by Schneider et al., 2012) where a variety of network iterations are generated throughout a single video sequence. Once a threshold number of unique interactions are observed, one iteration is generated. Each subsequent unique interaction creates a new iteration where the oldest interaction is removed. Each iteration is normalized to randomly generated networks with equal degree distributions. All iterations also have the same number of interactions. As a result, degree distribution and density are controlled through this method.
A list of common social network measurements defined by their both technical definition and their general applications.
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| Degree | Number of edges connected to a single node. In-degree refers to the number of interactions a node receives, and out-degree refers to the number of interactions a node outputs. | In all types of networks, degree informs how popular a single node is toward receiving and/or relaying connections. |
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| Strength | In networks with weighted edges, strength is the sum of all edge weights connected to a node. In-strength refers to the sum of all edge weights a node receives, and out-strength refers to the sum of all edge weights a node outputs. | In weighted networks, strength informs overall how popular a single node is toward receiving and/or relaying connections relative to the weight of each connection. |
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| Density | Proportion of actual connections in a network over the number of theoretically possible connections. | Measures to what extent the network connections are filled out between nodes. |
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| Betweenness centrality | Number of shortest paths that traverse a node. | Measures how central a node is in a network for relaying information and maintaining the network cohesion. |
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| Weighted closeness centrality | Calculated as inverse between the shortest path between two nodes, from one node to all other nodes in the network and weighted for number of connections among nodes. | Measures how central a node is in a network for relaying information and maintaining the network cohesion. |
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| Eigenvector centrality | Directly related to the number of contacts a node has and to the relative weight of the nodes to which it is connected. | Measures how central a node is in a network for relaying information and maintaining the network cohesion. |
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| Information centrality index | Calculated by combining all the paths present in a network and assigning a weight to them that is equal to the inverse of the path length. | It reflects the amount of information per individual contained in all possible paths that originate from and end with that individual. |
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| Clustering coefficient | A measure of how interconnected nodes are to one another. | Typically used to measure how cliquish nodes are in a network. |
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| Modularity | A measure of how a network can be subdivided into clusters of sub-networks. | Typically used to measure how cliquish nodes are in a network. |
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| Assortativity | A measure of the homogeneity of the degree distribution of a network. | Distinguishes whether nodes in a network all have a similar degree. |
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| Global efficiency | A measure of redundant pathways in the overall network and how efficient information can spread. | Distinguishes whether the overall network has shorter or longer paths between nodes. |
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A comparison of all published-to-date Drosophila social network studies with their network analysis methods summarized.
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| Time: 1.5 s. Distance: 2 body lengths. Angle: 90° | Unweighted, directed, iterative | 12 flies | 30 min | Ctrax | Yes (Fixerrors) |
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| Time: 0.5 s. Distance: 1 body length. | Weighted, directed, iterative. | 12 flies | 4 h | Ctrax | Yes (Fixerrors) |
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| Touch only: head to tail contact for 0.5 s. Gap length between interactions: 0.5 s. | Weighted, directed, static | 16 flies | 1 h | Flytracker | No |
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| Time: 2 s. Distance: 2 body lengths. Angle: <0° | Weighted, undirected, static | 10 flies | 15 min | Ctrax | Yes (FixTRAX) |
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| Automated method ( | Unweighted, directed, iterative | 12 flies | 30 min | Ctrax | Yes (Fixerrors) |
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| Automated method ( | Unweighted, directed, iterative | 6 flies, | 30 min | Ctrax | Yes (Fixerrors) |
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| Automated method ( | Unweighted, directed, iterative | 12 flies | 30 min | Ctrax | Yes (Fixerrors) |
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| Time: 0.6 s. Distance: <2.5 body length. Angle: <160° | Weighted, directed, static | 20 flies | 20 min | Flytracker | Yes |
*Authors cross-validated tracking by hand-annotating fly identities in a random sample of 700 frames.
A summary of the research objectives and hypotheses tested in all published-to-date Drosophila social network studies.
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| Quantification of the emerging properties of | |
| The experimental effects of social isolation on social networks and group formation | |
| The experimental effects of sensory deprivation on social networks and group formation | |
| Analysis of social space |
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| Diffusion analysis - modeling spread of information flow between flies | |
| The experimental effects of density and group size on social networks |
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| Investigating the evolutionary factors of social networks and group formation | |
| Genetic underpinnings/heritability of social networks and group formation | |
| Investigation of social networks from mixed groups |
*See
Summary of the advantages and disadvantages involved in simplistic network analyses with fewer parameters (less information column) compared to more complex analyses that require more input but controls more confounds (more information column).
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| Interaction definition | Fixed: | Treatment-specific: |
| Directionality of interaction | Undirected: | Directed: |
| Value of interaction | Unweighted: | Weighted: |
| Network definition | Static: | Iterative: |
| Data normalization | Standardized | Network permutation Z-score: |
FIGURE 2Emerging properties of social networks after social isolation. Data from Schneider et al. (2012) re-analyzed with automated criteria compared to the original published data with fixed criteria reveals social experience significantly affects social interaction measures (A–D) and social network measures (E–H). Flies were divided into three treatments: (i) Housed together (white) meaning all 12 flies in one video trial were raised together (n = 15 trials); (ii) Mixed together (light gray) meaning all 12 flies in one video trial were unfamiliar with each other from being raised with other flies (n = 22 trials); (iii) Isolated (dark gray) meaning all 12 flies in one video trial were completely socially isolated since eclosion (n = 24 trials). (A) Flies of the mixed group have significantly lower average interaction duration when analyzed using the automated criteria (p ≤ 0.0001). (B) Flies of the isolated treatment have significantly lower rates of interaction when analyzed using the automated criteria (p ≤ 0.0001). (C) Average proportion of interactions reciprocated were significantly lower in the isolated groups when analyzed using the automated criteria (p ≤ 0.0001). (D) Movement did not significantly differ between the three treatments (p = 0.0909). (E) No significant differences between the three treatments were observed for assortativity when analyzed using the automated criteria (p = 0.1027). (F) No significant differences between the three treatments were observed for clustering coefficient when analyzed using the automated criteria (p = 0.9540). (G) Groups of isolated flies form networks with a significantly higher global efficiency compared to controls when using automated criteria (p ≤ 0.0001). (H) Groups of isolated flies form networks with a significantly lower betweenness centrality compared to controls (p ≤ 0.0001). Panels (A–H) were analyzed with one-way ANOVA with ranks to determine if statistical differences exist between the groups. Outliers were removed from all the datasets. Bars indicate mean. Letters indicate statistical significance. (E–H) Networks were generated from the following automated criteria: distance = 1.5 body lengths, angle = 115°, time = 0.55 s (housed-together); distance = 1.5 body lengths, angle = 110°, time = 0.5 s (mixed-together); distance = 1.5 body lengths, angle = 110°, time = 0.95 s (isolated). Measurements were standardized using z-scores as described by Schneider et al. (2012). Panels (I–L) defines and visualizes the network measurements analyzed [taken from Schneider et al. (2012)]. (I) Assortativity is the correlation between nodes of a similar degree (degree shown as number inside node). Low assortativity indicates nodes of a dissimilar degree tend to interact whereas high assortativity indicates more nodes of a similar degree tend to interact. (J) Clustering coefficient reflects the interconnectedness of the nodes in a given network. Networks with low clustering coefficient have a higher proportion of nodes (see focal node highlighted in red) with neighbors that are unlikely to interact. Networks with high clustering have a higher proportion of nodes (see focal node highlighted in red) whose neighbors are interconnected. (K) Global efficiency of a network is a measurement of the average shortest path length that information would flow through. Networks with a low efficiency score indicates less efficient information flow on average because the connections between nodes require more steps (visualized by 4 steps required for information to reach the two highlighted nodes through red arrows). Networks with high efficiency have less distances on average between nodes (visualized by 3 steps required for information to reach the two highlighted nodes through red arrows). (L) Betweenness centrality is a measure of how many shortest paths traverse a node, which can indicate the relative importance of a node for information flow. Networks with low betweenness centrality have fewer nodes that are critical for network cohesion. This is visualized by the node highlighted with the red dotted circle; this node can easily be bypassed. In the example network with high betweenness centrality, the node highlighted with the red dotted circle cannot be bypassed for information to travel through the network, and networks with high betweenness centrality have more central nodes like that.
Summary of various genes and sensory manipulations studied in Drosophila social network experiments.
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| Olfactory mutation. | Reduction in the ability to form networks. |
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| Hearing impaired mutation. | No effect on social network measures. |
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| Gustatory mutation. | Reduction in the ability to form networks. |
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| Mutation associated with neurological and visual defects and reduced life span. | Increased global efficiency. |
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| Olfactory binding protein that is sensitive to male pheromones. |
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| Pleiotropic gene that influences several metabolic, physiological, behavioral (foraging) and developmental phenotypes. | The rover allele had higher global efficiency values while sitter allele had higher clustering coefficient and assortativity values. |
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| Olfactory receptor neurons that mediate chronic responses to male-specific pheromone cVA. |
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| Olfactory receptor neurons that mediate acute responses to male-specific pheromone cVA. | Inhibition of |
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| Associated with increased aggression. | Networks with a mixture of WT and |
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