Heydar Shojaei1, Mariano L Bossi2, Vladimir N Belov1, Stefan W Hell1,2. 1. Department of NanoBiophotonics, Max Planck Institute for Biophysical Chemistry (MPIBPC), 37077 Göttingen, Germany. 2. Department of Optical Nanoscopy, Max Planck Institute for Medical Research, 69120 Heidelberg, Germany.
Abstract
Two fluorophores bound with a short photoreactive bridge are fascinating structures and remained unexplored. To investigate the synthesis and photolysis of such dyes, we linked two rhodamine dyes via a diazoketone bridge (-COCN2-) attached to position 5' or 6' of the pendant phenyl rings. For that, the mixture of 5'- or 6'-bromo derivatives of the parent dye was prepared, transformed into 1,2-diarylacetylenes, hydrated to 1,2-diarylethanones, and converted to diazoketones Ar1COCN2Ar2. The high performance liquid chromatography (HPLC) separation gave four individual regioisomers of Ar1COCN2Ar2. Photolysis of the model compound─C6H5COCN2C6H5─in aqueous acetonitrile at pH 7.3 and under irradiation with 365 nm light provided diphenylacetic acid amide (Wolff rearrangement). However, under the same conditions, Ar1COCN2Ar2 gave mainly α-diketones Ar1COCOAr2. The migration ability of the very bulky dye residues was low, and the Wolff rearrangement did not occur. We observed only moderate fluorescence increase, which may be explained by the insufficient quenching ability of diazoketone bridge (-COCN2-) and its transformation into another (weaker) quencher, 1,2-diarylethane-1,2-dione.
Two fluorophores bound with a short photoreactive bridge are fascinating structures and remained unexplored. To investigate the synthesis and photolysis of such dyes, we linked two rhodamine dyes via a diazoketone bridge (-COCN2-) attached to position 5' or 6' of the pendant phenyl rings. For that, the mixture of 5'- or 6'-bromo derivatives of the parent dye was prepared, transformed into 1,2-diarylacetylenes, hydrated to 1,2-diarylethanones, and converted to diazoketones Ar1COCN2Ar2. The high performance liquid chromatography (HPLC) separation gave four individual regioisomers of Ar1COCN2Ar2. Photolysis of the model compound─C6H5COCN2C6H5─in aqueous acetonitrile at pH 7.3 and under irradiation with 365 nm light provided diphenylacetic acid amide (Wolff rearrangement). However, under the same conditions, Ar1COCN2Ar2 gave mainly α-diketones Ar1COCOAr2. The migration ability of the very bulky dye residues was low, and the Wolff rearrangement did not occur. We observed only moderate fluorescence increase, which may be explained by the insufficient quenching ability of diazoketone bridge (-COCN2-) and its transformation into another (weaker) quencher, 1,2-diarylethane-1,2-dione.
The possibility to
modify two fluorophores (and change the emission
parameters of two dye residues) in the course of one photochemical
reaction is intriguing and remained unexplored. If we consider two
masked (caged) fluorophores bound with a linker (Scheme ), the assembly may include
two photoconvertible caging groups, one for each fluorophore (Scheme A). In this case,
the photoactivation is stepwise, and the whole structure represents
only a bare aggregate of two caged dyes. Alternatively, if a single
photoreactive group efficiently suppresses the emission of the whole
compound, and this group can be transformed into a nonquenching state,
then both fluorophores may be activated in one step (Scheme B). This option is particularly
challenging, as the quenching efficiencies of energy or electron transfer
strongly depend on the distance. Therefore, we have chosen a potential
fluorescence quencher and used it as a linker directly connecting
two (identical) fluorophores.
Scheme 1
Combination of Two Caged Fluorophores
Bound with a Linker (A) and
an Alternative Based on a Single Photoreactive Caging Group Incorporated
into a Linker (B)
The literature survey
revealed that the fluorescein derivatives
incorporating benzil fragments (Ar1COCOAr2)
are essentially nonfluorescent (due to photoinduced electron transfer).[1−3] Therefore, we applied photoconvertible 2-diazo-1,2-diarylethanones
Ar1COCN2Ar2 closely related to Ar1COCOAr2, prepared bis-fluorophores bridged with
a diazoketone linker, and studied their photolysis. Our motivation
was to clarify whether the short diazoketone bridge (COCN2) incorporated between two dyes will suppress their emission, and
whether a Wolff rearrangement will take place. As fluorophores, we
have used N,N′-bis(2,2,2-trifluorethyl)-substituted
rhodamines,[4] which have absorption and
emission spectra very similar to those of fluorescein. The structures
of newly prepared compounds are given in Figure .
Figure 1
Diazoketone linkers −COCN2– connect two N,N′-bis(2,2,2-trifluorethyl)rhodamine
residues via
positions 5′ and 6′ of the pendant phenyl rings: four
possible regioisomers 1a–d and their
designations Iso4, Iso3, Iso1, and Iso2 (for isomers 1–4, respectively)
according to high performance liquid chromatography (HPLC) retention
times.
Diazoketone linkers −COCN2– connect two N,N′-bis(2,2,2-trifluorethyl)rhodamine
residues via
positions 5′ and 6′ of the pendant phenyl rings: four
possible regioisomers 1a–d and their
designations Iso4, Iso3, Iso1, and Iso2 (for isomers 1–4, respectively)
according to high performance liquid chromatography (HPLC) retention
times.
Results and Discussion
Synthesis
The
synthesis of bromorhodamines 6a,b from aminophenol 54 is given in Scheme . In the condensation
reaction leading to compounds 6a,b, we compared two sets
of conditions (see legend to Scheme ). Higher yields (43–47%) were achieved when
the first step was carried out without a solvent. Due to high temperature
(160 °C) and the presence of water in the gas phase, the partial
cleavage of the 2,2,2-trifluoroethyl amino group and the formation
of the rhodol byproduct—a dye with the hydroxyl group instead
of one CF3CH2NH residue—were observed.
Under drastic condensation conditions, the undesired reaction was
inevitable; it decreased the yields of the target compounds and complicated
the isolation of pure dyes 6a,b. For isolation of compounds 6a,b, we applied chromatography on reversed-phase (C18 silica gel) because crystallization or chromatography on regular
silica was not successful. The mixture of bromides 6a and 6b was stable by storing at −18 °C
but slowly decomposed at room temperature. A high degree of purity
(>95% HPLC area) was required for the success of the next coupling
step (Scheme ). Only
by applying highly pure bromides 6a,b, we were able to
obtain acetylenes 7a–c in synthetically useful
amounts.
Scheme 2
Synthesis of Regioisomeric Bromorhodamines 6a and 6b Containing N,N′-Bis(2,2,2-trifluoroethyl)
Groups
Conditions: (i) pyridine, CH2Cl2, rt, overnight; (iii) 48% aq. HBr, AcOH, reflux,
6 h; (iv) method A: 160 °C, 3 h; addition of 5 (2nd
equiv), 85% aq. H3PO4, 160 °C, 3 h (47%);
method B: 1,2-dichlorobenzene, 160 °C, 3 h, addition of 5 (2nd equiv), 160 °C, 3 h (31%).
Scheme 3
Bromides 6a,b and 1,2-Bis(tributystannyl)acetylene
in the Synthesis of Bis(rhodamine) Acetylenes 7a–c as a Mixture of 5,5-, 5,6-, and 6,6-Regioisomers
Synthesis of Regioisomeric Bromorhodamines 6a and 6b Containing N,N′-Bis(2,2,2-trifluoroethyl)
Groups
Conditions: (i) pyridine, CH2Cl2, rt, overnight; (iii) 48% aq. HBr, AcOH, reflux,
6 h; (iv) method A: 160 °C, 3 h; addition of 5 (2nd
equiv), 85% aq. H3PO4, 160 °C, 3 h (47%);
method B: 1,2-dichlorobenzene, 160 °C, 3 h, addition of 5 (2nd equiv), 160 °C, 3 h (31%).At the next step (Scheme ), bromides 6a,b were coupled with
bis(tributylstannyl)acetylene and, as expected, provided a mixture
of 3 compounds (7a–c). Isolation
was performed by chromatography on reversed-phase and afforded a mixture
of 5,5-, 5,6-, and 6,6-regioisomers in an overall yield of 81%.The acetylene-bridged systems consisting of two fluorescent dyes
linked directly through the triple bond belong to the family of through-bond
energy transfer cassetten (TBET-C).[5−7] The reaction conditions
in Scheme (for details,
see the Experimental Section) may be applied
for the synthesis of other TBET-Cs.The reported conditions
of hydration reaction (Scheme ) were first checked with diphenylacetylene
(tolane (9) in Scheme ) as a model. Transformation of tolane to deoxybenzoin 10 catalyzed by Nafion NR50,[8] Ga(F3CSO3)3,[9] or
CF3SO3H in CF3CH2OH[10] proceeded smoothly and with good yields. However,
under all of these conditions, hydration of acetylenes 7a–c was sluggish. With HSO3F (magic
acid),[11] Nafion NR50, Nafion 117, or p-toluenesulfonic acid, ketones did not form at all. Only
by using great excess of water, trifluormethanesulfonic (TfOH, reagent),
and propionic (solvent) acids at 140 °C, we managed to detect
the formation of regioisomeric ketones (Scheme ). The combinatorial fashion of the reaction
sequence 6a,b–7a–c–8a–d increased the
number of regioisomers on each step. The hydration reaction proceeded
through the corresponding vinyl esters formed from acetylenes and
TfOH. Further optimization was required, to fully hydrolyze these
esters to ketones 8a–d. The HPLC
analysis was difficult, due to numerous peaks with similar retention
times. However, we managed to isolate a mixture of 8a–d and then separate it to individual components 8a [5(CH2),5(CO)], 8b [6(CH2),5(CO)], 8c [5(CH2),6(CO)], and 8d [6(CH2),6(CO)] so that the overall yield was about 80%.
For that, we used preparative HPLC on reversed phase with a gradient
of acetonitrile in the basic aqueous buffer.
Scheme 4
Hydration of 7a, 7b, and 7c Mixture in the Presence
of Triflic F3CSO3H
(Reagent) and Propionic (Solvent) Acids Leads to the Mixture of Ketones 8a [5(CH2),5(CO)], 8b [6(CH2),5(CO)], 8c [5(CH2),6(CO)], and 8d [6(CH2),6(CO)]
The Regitz diazotransfer with
tosyl azide affords the target diazoketones 1a [5(N2),5(CO)], 1b [6(N2),5(CO)], 1c [5(N2),6(CO)], and 1d [6(N2),6(CO)]. For full structures of 1a–d,
see Figure .
Scheme 5
Synthesis and Photolysis of Azibenzil (11)
Conditions: (i) aq. AcOH, Nafion
NR50, 100 °C, 24 h, 70%; (ii) aq. Ga(F3CSO3)3, 100 °C, 24 h, 59%; (iii) aq. F3CCH2OH, F3CSO3H, MW, 90 °C, 1 h, 90%;
(iv) TsN3, DBU, MeCN, 0 °C, 1 h, rt, 3–18 h,
53%; (v) MeCN, aq. HEPES buffer, pH 6.5, air; (vi) MeCN, aq. HCOONH4 buffer, pH 7.3–7.4, air.
Hydration of 7a, 7b, and 7c Mixture in the Presence
of Triflic F3CSO3H
(Reagent) and Propionic (Solvent) Acids Leads to the Mixture of Ketones 8a [5(CH2),5(CO)], 8b [6(CH2),5(CO)], 8c [5(CH2),6(CO)], and 8d [6(CH2),6(CO)]
The Regitz diazotransfer with
tosyl azide affords the target diazoketones 1a [5(N2),5(CO)], 1b [6(N2),5(CO)], 1c [5(N2),6(CO)], and 1d [6(N2),6(CO)]. For full structures of 1a–d,
see Figure .
Synthesis and Photolysis of Azibenzil (11)
Conditions: (i) aq. AcOH, Nafion
NR50, 100 °C, 24 h, 70%; (ii) aq. Ga(F3CSO3)3, 100 °C, 24 h, 59%; (iii) aq. F3CCH2OH, F3CSO3H, MW, 90 °C, 1 h, 90%;
(iv) TsN3, DBU, MeCN, 0 °C, 1 h, rt, 3–18 h,
53%; (v) MeCN, aq. HEPES buffer, pH 6.5, air; (vi) MeCN, aq. HCOONH4 buffer, pH 7.3–7.4, air.Bis(rhodamine)diazoketones 1a–d (Figure ) were prepared
according to the modified and optimized procedure of M. Regitz using p-toluene sulfonyl azide and DBU as a base (Scheme ).[12,13] Diazoketones 1a–d were sensitive
to acids and decomposed under acidic conditions. They were isolated
in milligram amounts and purified by means of preparative HPLC with
acetonitrile and basic aqueous buffers (e.g., AcONH4 at
pH 8.6). The overall preparative yield of all compounds 1a [5(N2),5(CO)], 1b [6(N2),5(CO)], 1c [5(N2),6(CO)], and 1d [6(N2),6(CO)] was about 40%. To avoid decomposition, the products
were stored at −18 °C in the dark.[14]
Structure Elucidation of Diazoketones 1a–d
The regularities of 1H NMR
spectra reported
for 5- and 6-substituted (in the pendant phenyl ring) rhodamines[15] allowed us to assign structures to compounds 1a–d (Figure ). Additionally, we used gCOSY and gHMBCAD
spectra showing 1H–1H and multibond (optimized
for three bonds) 1H-13C correlations, respectively.
In the proton spectra, we observed six 1-proton multiplets corresponding
to two 3-substituted benzene rings: one with CO and one with CN2 group. For isomer 1 (lowest retention time in HPLC), these
signals were 8.09, 8.07, 7.92, 7.73, 7.56, and 7.20 ppm. In the gCOSY
spectrum, we did not observe cross-peaks between 8.09 and 7.73 ppm,
but all other cross-peaks required for two sets of three protons were
present. We could conclude that the signal at 8.09 ppm belongs to
the same set as the multiplets at 7.73 and 7.20 ppm, and the signals
at 8.07, 7.92, and 7.56 ppm belong to another aromatic ring. In the
gHMBCAD spectrum of this compound, we found that the 13C resonance in CO of the diazoketone has cross-peaks with multiplets
at 7.56 and 7.92 ppm. Therefore, the signals at 8.07, 7.92, and 7.56
ppm belong to the ring linked with CO in COCN2, and the
group of signals with δ = 8.09, 7.73, and 7.20 ppm—to
the ring bound with CN2. In each set, the most high-field
signal belongs to H-7(7′)—the proton nearby the fluorophore.[15] This proton is shielded by the π-system
of the fluorophore. The molecule is twisted, and H-7(7′) is
out of the plane of the three fused six-membered rings. Thus, in the
ring with CO, H-7′ is found at 7.56 ppm (weak splitting, 6-CO
isomer), and for the ring with CN2, the signal at 7.20
ppm belongs to H-7 (strong splitting, 5-CN2 isomer). To
confirm that there was no rearrangement (exchange of the oxo and diazogroups
in the course of diazotransfer in Scheme ), we isolated the precursor of compound 1c (isomer 1). This ketone is named 8c in Scheme and Table . The structure of 1,2-diarylethanone-1 8c was established using the principles mentioned above, and 8c was shown to be the “true” precursor of 1c: [5(CH2),6(CO)]-8c.
Table 1
Chemical Shifts (δ, ppm) and
Coupling Constants (J, Hz) of Aromatic Protons H-4–H-7
and H-4′–H-7′ in Compound 8c (Scheme ) and Diazoketones 1a–d (Figure ) in [D4]MeOH
compound
H-4 (J)
H-5 (J)
H-6 (J)
H-7 (J)
H-4′ (J)
H-5′ (J)
H-6′ (J)
H-7′ (J)
8c [5(CH2),6(CO)]
7.76 d (0.7)
7.52 dd (8.0, 1.5)
7.10 d (7.9)
8.28 dd (8.0, 1.4)
8.11 dd (8.0, 0.6)
7.90 d (0.7)
1a [5(N2),5(CO)]
Isomer 4
8.24 d (1.4)
8.01 dd (7.9, 1.7)
7.39 d (7.9)
8.08 d (1.8)
7.93 dd (8.1, 1.9)
7.34 d (8.1)
1b [6(N2),5(CO)] Isomer 3
8.23 d (1.5)
7.93 dd (7.9, 1.6)
7.29 d (7.9)
8.14 d (8.3)
7.86 dd (8.2, 1.7)
7.44 d (1.3)
1c [5(N2),6(CO)] Isomer
1 ([D3]MeCN)
8.09 d (0.5)
7.73 dd (8.2, 1.8)
7.20 dd (8.2, 0.7)
8.07 dd (7.9, 0.8)
7.92 dd (7.9, 1.4)
7.56 dd (1.3, 0.8)
1d [6(N2),6(CO)] Isomer 2
8.11 dd (8.1, 2.6)
7.81 d (7.9)
7.35 s
8.06 dd (8.3, 2.5)
7.63 d (7.4)
7.22 s
Photolysis of Azibenzil PhCOCN2Ph (11) and Bis-Rhodamines
1a–d Having Diazoketone Bridge
The main reactivity
pattern of α-diazoketones and, in particular, azibenzil 11 (Scheme ), which we used as a model compound, includes elimination of dinitrogen
and formation of highly reactive carbenes.[16] The reactions can be induced thermally, photochemical, or catalytically
(acids, heavy metal oxides, and salts). The synthetically useful and
well-studied reaction path includes the formation of carbene, its
rearrangement into ketene, and the reaction with a nucleophile (e.g.,
water, alcohol, or amine); the overall transformation known as Wolff
rearrangement (Scheme ).[17] The photochemically induced Wolff
rearrangement discovered by Horner[14] is
advantageous because the photolysis is the most “ketene-rich”
reaction path, while thermal or catalytic reactions lead mostly to
the products of C–H insertion.[17,18]Azibenzil
(11)[19−21] was prepared from tolane (9) as given
in Scheme . The photolysis
of azibenzil[22,23] was performed under irradiation
with 365 nm light in acetonitrile–water mixtures (80/20; v/v)
in the presence of HEPES (pH 6.5) or HCOONH4 buffer (pH
7.3–7.4). The reaction mixtures were analyzed by means of HPLC
with a UV–vis absorption (diode array) spectrometer and a mass
spectroscopic detection (LC-MS). The expected product of the photolysis
(in the absence of amines in the reaction solution)—diphenylacetic
acid (13)[24]—was detected
along with deoxybenzoin (10), benzil (14), and traces of diphenylmethane (15) (Scheme ). These compounds were identified
by comparison with commercial reference substances (retention times,
UV, and mass spectra). In some experiments, we also detected products
with higher masses: an oxazole formed upon [2 + 3] cycloaddition from
acetonitrile and ketene 12b,[25] as well as small amounts of 3,3,6,6-tetraphenyl-1,2,4,5-tetroxane,
the peroxide related to the photocyclization product of diphenylacetic
acid.[26]Photolysis of the solutions
containing aqueous HEPES buffer provided
complex mixtures with diphenylacetic acid (13) as one
of the main products (Figure S1). Irradiation
in the presence of aqueous HCOONH4 was found to be “cleaner”
(Figure ) and resulted
in the formation of diphenylacetic acid amide (16; Scheme ). Azibenzil 11 and amide 16 had the same retention times
under conditions of HPLC separation. Unlike azibenzil (11) and benzil (14), amide 16 did not display
the absorption maximum at about 320 nm. The composition of amide 16 was confirmed by HRMS data obtained for the reaction mixture
(see Figure S2). The origin of amide 16 is obvious: it formed from ketene 12b and
ammonia, as the strongest nucleophile present in the equilibrium in
aqueous ammonium formate (2 mM) at pH 7.3–7.4 (the initial
concentration of azibenzil was 0.1 mM.) At physiological pH, ammonia
may be considered as an analogue of biogenic amines,[27] which have basicity similar to ammonia.
Figure 2
Irradiation of azibenzil
(PhCOCN2Ph) dissolved in aqueous
acetonitrile (80% acetonitrile, 20% water, v/v) with HCOONH4 buffer (pH 7.3) results in full conversion to a new substance (amide 16, see Figure S2) with the same
retention time but without absorption maximum at 319 nm. (A) Absorption
changes upon irradiation; inset: transient at 319 nm. (B) Chromatograms
(2D maps) of the sample before (left) and after (right) irradiation.
(C) Chromatogram at 260 nm (a shift was introduced for clarity); inset:
absorption spectra of the main peaks.
Irradiation of azibenzil
(PhCOCN2Ph) dissolved in aqueous
acetonitrile (80% acetonitrile, 20% water, v/v) with HCOONH4 buffer (pH 7.3) results in full conversion to a new substance (amide 16, see Figure S2) with the same
retention time but without absorption maximum at 319 nm. (A) Absorption
changes upon irradiation; inset: transient at 319 nm. (B) Chromatograms
(2D maps) of the sample before (left) and after (right) irradiation.
(C) Chromatogram at 260 nm (a shift was introduced for clarity); inset:
absorption spectra of the main peaks.Having in mind the encouraging results obtained with model diazoketone 11, we performed the photolysis of diazoketones 1a–d (12 μM) in aqueous acetonitrile (acetonitrile/water = 80/20;
v/v) in the presence of ammonium formate buffer (pH 7.3-7.4) (Scheme ). Surprisingly,
in this solvent, diketones Ar1COCOAr2 were the
main products formed upon full conversion of the starting diazoketones 1a–d. The LC-MS data (Figure S3a) indicated that the molecular masses of the photolysis
products were always 12 Da lower than the molecular masses of diazoketones 1a–d. A mass difference of −12
Da corresponds to the elimination of nitrogen (−28) and the
addition of one oxygen atom (+16). For diazoketones 1a–d, the Wolff rearrangement is disfavored, probably
because the migration ability of the bulky and heavy dye residue is
reduced. The fluorescence signals (and their quantum yields) of diazoketones 1a–d and the mixture of products obtained
from their photolysis are given in Figure . The emission efficiencies of compounds 1a–d vary in the range of 0.09–0.24.
Their emission is reduced, compared with the parent rhodamines, which
are highly fluorescent,[4] but not completely
quenched by the presence of the diazoketone bridge. The diazoketone
residue turned out to be an inefficient quencher, at least for these
rhodamine dyes. The comparison of the absorption spectra recorded
before and after photolysis is given in Figure S4b. Compounds 1a–d have 3–4 times
higher absorption at 365 nm (irradiation wavelength) than the parent
fluorophore—N,N′-bis(2,2,2-trifluoroethyl)rhodamine.[4] The presence of the azibenzil chromophore (Figure , abs. max. 325 nm)
is masked by the relatively strong absorption of the parent dye with
a maximum at 290 nm (Figure S4b). The photolysis
of compounds 1a–d was accompanied
by an increase in emission by 20–240% (Figures , S4a, and S5).
On the other hand, the relative absorption intensity at 300–310
nm decreased, after the photolysis was complete. The absorption spectra
of the products and the parent rhodamine dye are much more similar
to each other than the absorption spectra of diazoketones 1a–c, which differ from each other considerably (Figure S4b). As expected, isomers 1 and 3 (compounds 1b and 1c in Figure ) gave the same diketone 5-ArCOCOAr-6. The
products’ retention times (Figure S3a) and emission gains were very similar: 30 and 20%, respectively
(Figure ). For all
diazoketones, the photoactivation ratios (1.2–2.4) are moderate,
if compared with dyes having two 2-nitrobenzyloxycarbonyl residues
attached to the nitrogen atoms in one fluorophore,[28] photoactivatable rhodamine spiroamides,[29] or rhodamines incorporating the spiro-diazoketone fragment.[30]
Scheme 6
Photolysis of the Bis(rhodamine) Diazoketones 1a, 1b, 1c, and 1d
The
main product is shown. Solvent:
acetonitrile/water 80/20 (v/v), aqueous HCOONH4 buffer
(pH 7.3–7.4).
Figure 3
Relative fluorescence of isomers 1–4 (Figure ) in MeCN (80% v/v)
and 10 mM HCOONH4 buffer, pH = 7.4 (20% v/v). Yellow bars:
starting materials.
Green bars: after complete photolysis of the starting diazoketones.
The numbers on top of the bars show the fluorescence quantum yields
for the starting compounds and their increase upon photolysis to mixtures
containing α-diketones as the main products (see Figure S3).
Relative fluorescence of isomers 1–4 (Figure ) in MeCN (80% v/v)
and 10 mM HCOONH4 buffer, pH = 7.4 (20% v/v). Yellow bars:
starting materials.
Green bars: after complete photolysis of the starting diazoketones.
The numbers on top of the bars show the fluorescence quantum yields
for the starting compounds and their increase upon photolysis to mixtures
containing α-diketones as the main products (see Figure S3).
Photolysis of the Bis(rhodamine) Diazoketones 1a, 1b, 1c, and 1d
The
main product is shown. Solvent:
acetonitrile/water 80/20 (v/v), aqueous HCOONH4 buffer
(pH 7.3–7.4).This result may be explained
if we assume that the quenching ability
of diazoketone COCN2 is higher than that of α-diketone
COCO, but the former does not completely inhibit the emission, while
the latter does not allow to unfold the full fluorescence signal pertinent
to two fluorophores. In addition, the quenching ability of the COCN2 residue toward “left” (Ar1) and
“right” (Ar2) aryl groups in Ar1COCN2Ar2 is expected to be different, and may
also depend on the substitution pattern of the aromatic ring (i.e.,
5′ or 6′). The Wolff rearrangement is unfavored because
the migration ability of the very bulky dye residue is low.
Conclusions
We prepared and studied the photolysis of assemblies consisting
of the two identical fluorophores directly bound with a short, compact,
and photoconvertible diazoketone bridge (−COCN2−).
Structurally, this approach to compounds in which two fluorophores
can be activated with one photon is simpler than the design of sophisticated
assemblies containing one photoconvertible unit (FRET acceptor) bound
with two fluorescent dyes (FRET donors).[31] In the course of photolysis, we observed only a moderate fluorescence
increase. However, this method may be easily extended to compounds
with other, more efficient quenchers linking two fluorescent dyes
and undergoing photoconversion into another, essentially nonquenching
state.
Experimental Section
General Remarks
The reactions were performed with magnetic
stirring under argon. Oil baths were used for heating the reaction
mixtures, and the bath temperatures are given as reaction temperatures.
Evaporations in vacuum were performed in a rotary evaporator with
bath temperature not exceeding 40 °C. NMR spectra were recorded
at 25 °C on an Agilent 400-MR (400 MHz 1H and 100.5
MHz 13C). All spectra are referenced to tetramethylsilane
(δ = 0 ppm) using the signals of the residual protons of CHCl3 (7.26 ppm) in CDCl3, CHD2OD (3.31 ppm)
in CD3OD (49.15 ppm for 13C), CHD2CN (1.94 ppm) in CD3CN (1.39 and 189.69 ppm for 13C), or [D5]DMSO (2.50 ppm for 1H); 39.5 ppm
for 13C in [D6]DMSO. Multiplicities of signals
are described as follows: s = singlet, br. = broad signal, d = doublet,
t = triplet, q = quartet, m = multiplet, dd = doublet of doublets.
Coupling constants (J) are given in hertz. Structural
assignments for asymmetric acetylenes 7a–c, ketones 8a–d, and diazoketones 1a–d were
made with additional information from gCOSY, gHSQC, and gHMBC experiments.
Mass spectra with electrospray ionization (ESI-MS) were recorded on
a Varian 500-MS spectrometer (Agilent). ESI-HRMS were measured on
a MICROTOF spectrometer (Bruker) equipped with an Apollo ion source
and a direct injector with an LC-autosampler Agilent RR 1200. Analytical
RP-HPLC was carried out with Knauer Azura or Thermo Fisher Scientific
(Ultimate 3000) systems equipped with diode array detectors. Solvent
A: H2O + 0.1% v/v TFA; solvent B: MeCN + 0.1% v/v TFA.
For the Knauer HPLC system: analytical column US10C18HQ-250/P46 (Interchim,
250 mm × 4.6 mm, 10 μm, flow rate 1.2 mL/min). LC-MS analyses
were performed with Thermo Fisher Scientific ISQ EM mass spectrometer
(coupled to Ultimate 3000 system) using a gradient of acetonitrile
(20–100%, if not stated otherwise) in water (with the addition
of 0.1% v/v HCOOH to both solvents). Preparative HPLC separations
(reversed phase) were accomplished on an Interchim puriFlash 4250
device with a 250 × 21.2 mm column PF5C18AQ (10 μ, flow
rate 20 mL/min) or a column from Knauer GmbH (Berlin, Germany), 250
× 30 mm, 5 μ, flow rate 45 mL/min. The mixtures of acetonitrile
with 50 mM aqueous solutions of AcONH4 (pH ∼6.9)
or 50 mM HCOONH4 (pH ∼6.5) were used as neutral
buffers for the isolation of diazoketones 1a–d. Individual regioisomers 7a–c and 8a–d were isolated by preparative HPLC. Column: Phenomenex Kinetex, 5
μm C18, 250 × 21 mm. Solvent A: H2O + 0.05%
v/v TFA; solvent B: MeCN. Gradient A/B: 70/30–0/90 (0–20
min), flow rate 18 mL/min, 22°C; detection at 500 nm. Analytical
TLC (normal phase) was performed on MERCK ready-to-use plates with
silica gel 60 (F254). The spots were detected under UV
light (254 and 365 nm). TLC on reversed phase: silica gel 60 RP-18
F254S, 50 × 75 mm plates purchased from MERCK (Darmstadt,
Germany). Automated flash column chromatography was carried out using
cartridges with regular silica gel on a Biotage Isolera One device. m-Anisidine (2) was purchased from Sigma-Aldrich;
compounds 3–5 were prepared as described
in ref (4).
Photochemistry
Irradiation experiments were performed
in a home-build setup,[32] using a 365 nm
LED as irradiation source (M365-L2, Thorlabs), a deuterium/xenon lamp
(DH-2000-BAL, Ocean Optics) as an illumination source (for recording
absorption spectra), and a diode array spectrometer (FLAME-S-UV–VIS–ES,
Ocean Optics). The intensity of the irradiation light was calibrated
with a chemical actinometer (Azobenzene in MeOH). The samples were
kept at 20 °C and continuously stirred with a Peltier-based temperature
controller (Luma 40, Quantum Northwest, Inc.). The absorption of the
samples was recorded at a right angle with respect to the irradiation
source, at fixed irradiation intervals until complete conversion to
the final product. At fixed intervals, a small sample was extracted
to perform LC-MS experiments (Shimadzu LCMS-2020).
5′-Bromo-N,N′-bis(2,2,2-trifluoroethyl)rhodamine
(6a) and 6′-Bromo-N,N′-bis(2,2,2-trifluoroethyl)rhodamine (6b)
In
a pear-shaped flask, powdered phthalic anhydride (500 mg, 2.20 mmol,
1.0 equiv) and powdered aminophenol 54 (317
mg, 1.66 mmol, 0.75 equiv) were well mixed and heated under argon
at 170 °C for 3 h. The course of the reaction was monitored via
HPLC and TLC. After no more changes in HPLC and TLC were detected,
another portion of aniline 5 (253 mg, 1.32 mmol, 0.6
equiv) and 85% aq. H3PO4 (2.0 mL) were added
and the heating was continued at 160 °C for 3 h. After cooling
to rt, the red mixture was taken up in ethyl acetate, washed with
aqueous NaHCO3 (2 × 50 mL), sat. NaCl solution (50
mL), dried over MgSO4, and evaporated to get 1.37 g of
a glassy red solid. It was dissolved in ethyl acetate, applied onto
Celite, dried, and subjected to flash chromatography (regular SiO2, RediSep Rf cartridge 120 g, 25 μM; gradient: 10 to
85 v/v% AcOEt in hexane). The red fractions containing the product
were pooled and concentrated to give 602 mg (48%) of the title compound
as a bright red solid. TLC (SiO2) hexane/AcOEt 1:2, Rf (mixture 6a, 6b)
= 0.33. TLC (reversed phase): MeCN:H2O, 7:3; Rf (mixture 6a, 6b) = 0.19. Analytical
HPLC (Knauer, A/B = 70/30–0/100 in 20 min, λ = 530 nm): tR = 11.3 min and 11.6 min (1:1; sum of peak
areas 100%). As a byproduct, we isolated 172 mg (14%) of compounds
with one oxygen atom instead of one CF3CH2NH
group (dark orange solid). For additional purification, the product
was dissolved in a minimal amount of aqueous MeCN and subjected to
preparative HPLC (Interchim; gradient MeCN/H2O: 20/80–70/30
with 0.1 v/v% of HCOOH in both components); detection interval 200–600
nm, column Knauer (see the General Remarks section). The pure fractions were pooled and evaporated; the residue
dissolved in 1,4-dioxane and filtered through a 0.2 μM PTFE
membrane filter. The dioxane solution was frozen and lyophilized to
yield 550 mg (44%) of compounds 6a,b as red solid. Mixture
of 5′- and 6′-COOH isomers in ca. 1:1 ratio. 1H NMR (CD3CN, 400 MHz) δ 8.11 (d, 0.5H, J = 1.8, H-4′ in 5′-isomer), 7.89–7.75
(m, 1H, H-6′ in 5′-isomer and H-4′ in 6′-isomer),
7.41 (d, 0.5H, J = 1.5, H-7′ in 6′-isomer),
7.11 (d, 0.5H, J = 8.2, H-7′ in 5′-isomer),
6.64–6.55 (m, 4H), 6.46 (m, 2H), 5.27 (t, 2H, J = 7.0, NH), 3.88 (m, 4H, CH2CF3). 13C{1H} NMR (CD3CN, 101 MHz) δ 169.7, 169.1
(COOH), 156.1, 154.0, 153.0, 151.1, 133.8 (all Cq), 139.4
(CH), 134.6 (CH), 130.9 (Cq), 130.6 (Cq), 130.3
(2 × CH), 128.8 (CH), 128.5 (CH), 128.3 (Cq), 127.6
(CH), 127.5 (Cq), 127.2 (CH), 127.0 (q, J = 280, CF3), 124.5 (Cq), 111.6 (2 × CH),
109.3 (Cq), 99.9 (2 × CH), 44.3 (2 × q, J = 44, CH2CF3). 19F NMR ([D6]DMSO, 376 MHz) δ −70.5
(t, J = 9.6). HRMS (ESI-TOF) m/z: [M + H]+ calcd for C24H16BrF6N2O3 573.0243; found 573.0224. m/z: [M + Na]+ calcd for C24H15BrF6N2O3Na
595.0062; found 595.0042.
Compounds 7a–c
A 1:1 mixture of
5′- and 6′-bromorhodamines 6a,b (2.82 g, 4.9 mmol, 2.0 equiv) and Pd(PPh3)4 (284 mg, 0.25 mmol, 0.1 equiv) was transferred into a screw-cap
100 mL pressure tube and purged with argon for 5 min. Degassed dioxane
(45 mL) and bis(tributylstannyl)acetylene (1.29 mL, 1.48 g, 2.46 mmol,
1.0 equiv) were added, and the reaction mixture was purged with argon
for 10 min. The reaction vial was closed, and the red reaction solution
was heated to 110 °C with stirring for 5 h. The course of the
reaction was monitored by TLC, LCMS, or HPLC. After the reaction was
complete, the reaction mixture was cooled to rt, water (50 mL) was
added, and the mixture was extracted with ethyl acetate (3 ×
50 mL). The combined organic solutions were washed with brine and
dried over MgSO4. The solvents were removed under reduced
pressure. The residue (3.5 g) was dissolved in ethyl acetate, applied
onto Celite, and subjected to flash chromatography in two portions.
Cartridge with 40 g of regular SiO2 (Puriflash, 15 μm);
eluent CH2Cl2: MeOH = 90:10 to 35:65 to 50:50
(%, v/v). The fractions containing compounds 7a–c were pooled and concentrated under reduced pressure, excluding
light and atmospheric oxygen. The residue was dissolved in dioxane,
filtered through a 0.2 μM TFFP filter, frozen, and lyophilized.
Yield 2.01 g (81%) of the mixture 7a, 7b and 7c (red solid). TLC (SiO2), CH2Cl2/AcOEt 1:1; Rf = 0.28,
0.20, 0.13. Analytical HPLC (Knauer, A/B = 80/20–30/70 in 30
min, λ = 530 nm): tR = 20.4 min
(peak area 34%), 21.5 min (peak area 40%), 22.3 min (peak area 26%). Compound 7a [isomer 5,5]. 1H NMR (CD3CN, 400 MHz) δ 8.16 (dd, 2H, J = 1.5, 0.8;
H-4,4′), 7.90 (dd, 2H, J = 8.0, 1.5; H-6,6′),
7.26 (dd, 2H, J = 8.0, 0.9; H-7,7′), 6.63
(d, 4H, J = 8.7), 6.59 (d, 4H, J = 2.4), 6.48 (dd, 4H, J = 8.7, 2.4), 5.28 (t, 4H, J = 8.7, NH), 3.89 (qd, 8H, J = 9.3, 6.8;
CH2CF3). 13C{1H} NMR (CD3CN, 101 MHz) δ 169.7 (COOH), 154.2, 154.0, 151.1, 139.4,
130.5, 129.1, 126.9 (q, J = 276, CF3),
125.9, 125.5, 111.6, 109.85, 99.9, 90.6, 45.8 (q, J = 33, CH2CF3). HRMS
(ESI-TOF) m/z: [M + H]+ calcd for C50H31F12N4O6 1011.2046; found 1011.2040. m/z: [M + Na]+ calcd for C50H30F12N4O6Na 1033.1866; found 1033.1850. m/z: [M + 2H]2+ calcd for C50H32F12N4O6 506.1060;
found 506.1057. Compound 7b [isomer 5,6′]. 1H NMR (CD3CN, 400 MHz) δ 8.17 (dd, 1H, J = 1.5, 0.8; H-4), 8.09 (dd, 1H, J = 8.0,
0.7; H-4′), 7.90 (dd, 1H, J = 8.0, 1.4; H-6),
7.86 (dd, 1H, J = 8.0, 1.4; H-5′), 7.46 (dd,
1H, J = 1.4, 0.7; H-7′), 7.25 (dd, 1H, J = 8.0, 0.7; H-7), 6.81 (d, 2H, J = 8.8),
6.75 (d, 2H, J = 8.8), 6.71 (dd, 4H, J = 8.4, 2.4), 6.62 (dd, 2H, J = 8.8, 2.4), 6.59
(dd, 2H, J = 8.8, 2.4), 5.74 (br. s, 4H, NH), 3.96
(m, 8H, CH2CF3). 1H NMR (CD3OD, 400 MHz) δ 8.36 (m, 1H, H-4), 8.27 (d, 1H, J = 8.1, H-4′), 8.02 (dd, 1H, J = 8.1, 1.5;
H-5′), 7.98 (dd, 1H, J = 8.0, 1.6; H-6), 7.60
(dd, 1H, J = 1.5, 0.6; H-7′), 7.39 (dd, 1H, J = 8.0, 0.6; H-7), 7.05 (d, 2H, J = 9.0),
7.00 (d, 2H, J = 9.0), 6.93 (dd, 4H, J = 7.2, 2.3), 6.82 (m, 4H), 4.12 (m, 8H, CH2CF3). 13C{1H} NMR (CD3OD, 101 MHz)
δ 172.7 (COOH), 167.2, 167.0, 155.7, 154.2 (all Cq), 136.6 (CH), 133.1 (CH), 131.1 (CH), 130.3 (CH), 129.7 (CH), 125.1
(q, J = 282, CF3), 128.9 (Cq), 128.8 (Cq), 128.4 (CH), 128.1 (Cq), 127.5
(CH), 124.2 (Cq), 113.6 (CH), 111.6 (Cq), 97.3
(CH), 91.1 (Cq), 89.4 (Cq), 45.1 (m, CH2CF3). HRMS (ESI-TOF) m/z: [M + H]+ calcd for C50H31F12N4O6 1011.2046;
found 1011.2039. m/z: [M + Na]+ calcd for C50H30F12N4O6Na 1033.1866; found 1033.1853. m/z: [M + 2H]2+ calcd for C50H32F12N4O6 506.1060;
found 506.1054. Compound 7c [isomer 6,6]. 1H NMR (CD3CN, 400 MHz) δ 8.02 (dd, 2H, J = 8.0, 0.7; H-4,4′), 7.79 (dd, 2H, J = 8.0,
1.4; H-5,5′), 7.37 (dd, 2H, J = 1.4, 0.7;
H-7,7′), 6.74 (d, 4H, J = 8.8; H-4″,5″
in xanthene), 6.68 (d, 4H, J = 2.4; H-1″,8″
in xanthene), 6.57 (dd, 4H, J = 8.8, 2.4; H-3″,6″
in xanthene), 5.69 (br. s, 4H, NH), 3.94 (m, 8H, CH2CF3). 1H NMR (CD3OD, 400 MHz) δ 8.32
(d, 2H, J = 7.9, H-4,4′), 7.95 (m, 2H, H-5,5′),
7.63 (dd, 2H, J = 1.4, H-7,7′), 7.19 (d, 4H, J = 9.2), 7.13 (d, 4H, J = 2.1), 7.00 (dd,
4H, J = 9.1, 2.2), 4.23 (q, 8H, J = 9, CH2CF3). 13C{1H}
NMR (CD3OD, 101 MHz) δ 160.2, 159.9 (COOH), 136.2
(Cq), 134.8 (CH), 134.2 (CH), 133.1 (CH), 132.6 (CH), 130.5,
128.4, 127.7, 124.9 (all Cq), 124.8 (q, J = 280, CF3), 118.1 (CH), 116.3 (Cq), 97.6
(CH), 92.4 (Cq), 45.2 (q, J = 34, CH2CF3). HRMS (ESI-TOF) m/z: [M + 2H]2+ calcd for C50H32F12N4O6 506.1060;
found 506.1056.
Hydration of Acetylenes 7a–c to Ketones 8a–c
The reaction was carried
out in two 20
mL Biotage microwave reaction vials. The mixture of acetylenes 7a–c (100 mg, 0.10 mmol, 1.0 equiv) was
placed in a vial, purged with Ar, and sealed with a septum and a cap.
Under stirring at room temperature, the following reagents were added
dropwise via syringes to each vial: propionic acid (300 μL,
297 mg, 4.07 mmol, 40.5 equiv), water (2.10 mL, 116 mmol, 1180 equiv),
and CF3SO3H (4.50 mL, 7.70 g, 51 mmol, 518 equiv).
The reaction mixtures were heated with stirring at 140 °C. After
1, 2, and 3 h, additional portions of CF3SO3H (0.50 mL each time) were added dropwise at 140 °C. After heating
at 140 °C for 4 h, the reaction mixture was cooled down to 100
°C; water (1.0 mL), propionic acid (0.1 mL), and CF3SO3H (0.50 mL) were added; and heating was continued at
140 °C for 1 h. After 5 h, CF3SO3H (500
μL) was added at 140 °C and heating was continued. After
6 and 8 h, the reaction mixture was cooled to 100 °C, and further
portions of water (1.0 mL), propionic acid (0.1 mL), and CF3SO3H (0.50 mL) were added. After each addition, heating
at 140 °C was continued, and finally, the reaction mixture was
heated at 140 °C overnight. The HPLC (LC-MS) analysis evidenced
full conversion. The contents of two vials were carefully transferred
with aqueous dioxane into a 1 L Erlenmeyer flask with saturated aqueous
NaHCO3 (200 mL) and ethyl acetate (100 mL). The flask was
cooled with ice water, and stirring was applied to avoid strong foaming.
If pH of the aqueous layer was slightly basic or neutral, the organic
layer was separated and the aqueous layer was extracted with ethyl
acetate (3 × 25 mL). Combined organic solutions (OS1) were set
aside; the aqueous phase was acidified to pH 5 by addition of 10%
aq. citric acid and extracted with ethyl acetate (3 × 25 mL).
These “second” organic solutions (OS2) were washed with
saturated aq. NaHCO3. The combined OS1 and OS2 were washed
with water (2 × 50 mL), brine (2 × 50 mL), dried over MgSO4, and concentrated. The residue was dissolved in MeCN (6 mL)
and water (2 mL) and subjected to prep. RP-HPLC (in 2 portions). HPLC
column Knauer 250 × 30 mm, MeCN/aqueous 50 mM NH4OAc
buffer (pH 6.9) = 40:60–70:30 in 30 min, flow rate 45 mL/min,
λ = 530 nm. The residue was dissolved in dioxane, filtered through
a 0.2 μM PTFE membrane filter, frozen, and lyophilized to yield
163 mg (80%) of a dark red solid containing all four isomers of 8a–d. Further separation (RP-HPLC) (see
above) afforded four fractions of the individual regioisomers: 6CH2-6CO (8d, 41 mg, 20%); 5CH2-6CO (8c, 13 mg, 6.4%); 6CH2-5CO (8b, 35
mg, 17%); 5CH2-5CO (8a, 30 mg, 15%). In total,
119 mg (59%) of four regioisomers as red solids was isolated. TLC:
CHCl3/MeOH/H2O = 35:30:2; Rf = 0.15 for all four isomers. Analytical HPLC (Interchim
column 4.6 × 250 mm, MeCN/50 mM aq. NH4OAc buffer
= 40:60–70:30% in 30 min, flow rate 1.2 mL/min, λ = 500
nm): tR (6CH2-6CO, 8d) = 26.6 min (peak area 98%), tR (5CH2-6CO, 8c) = 27.3 min (peak area 90%), tR (6CH2-5CO, 8b) = 28.4
min (peak area 99.5%), tR (5CH2-5CO, 8a) = 28 min (peak area 98%). Compound 8a
[5(CH)-5(CO)]. 1H NMR (CD3CN, 400 MHz) δ 8.60 (dd, 1H, J = 1.6, 0.7; H-4′ [CO]), 8.37 (dd, 1H, J =
8.1, 1.6; H-6′ [CO]), 7.86 (m, 1H, H-4 [CH2]), 7.64
(dd, 1H, J = 7.9, 1.6; H-6 [CH2]), 7.36
(dd, 1H, J = 8.0, 0.7; H-7′ [CO]), 7.18 (dd,
1H, J = 7.9, 0.7; H-7 [CH2]), 6.63–6.55
(m, 8H), 6.47 (ddd, J = 8.7, 3.2 and 3.4; 4H), 5.24
(2 × t, J = 7, 4H, NH), 4.68 (s, 2H, CH2CO), 3.88 (2 × dq, J = 7.0, 9.4; 8H,
CH2CF3). 13C{1H} NMR (CD3CN, 101 MHz) δ 197.4 (CO), 170.5, 169.7 (COOH), 158.4,
153.9, 153.2, 151.1, 150.9, 139.8, (all Cq), 138.6 (CH),
138.3 (Cq), 136.2 (CH), 130.2 (2 × CH), 129.0, 128.6,
128.3, 127.1 (all Cq), 126.9 (q, J = 282,
CF3), 126.2 (CH), 125.9 (CH), 125.6 (Cq), 125.1
(CH), 111.6 (CH), 110.0 (CH), 109.2 (CH), 100.0 (CH), 85.5 (CqO), 85.1 (CqO), 46.0 (CH2), 45.8 (2
×q, J = 43, CH2CF3). HRMS (ESI-TOF) m/z: [M + H]+ calcd for C50H33F12N4O7 1029.2152; found 1029.2148. m/z: [M + Na]+ calcd for C50H32F12N4O7Na
1051.1972; found 1051.1937. m/z:
[M + 2H]2+ calcd for C50H34F12N4O7 515.1112; found 515.1113. Compound 8b [6(CH)-5(CO)]. 1H NMR (CD3CN, 400 MHz) δ 8.48 (dd,
1H, J = 1.6, 0.7; H-4 [CO]), 8.24 (dd, 1H, J = 8.1, 1.6; H-6 [CO]), 7.93 (dd, 1H, J = 7.9, 0.7; H-4 [CH2]), 7.56 (dd, 1H, J = 7.9, 1.4; H-5 [CH2]), 7.28 (dd, 1H, J = 8.1, 0.7; H-7 [CO]), 7.11 (dd, 1H, J = 1.4, 0.7;
H-7 [CH2]), 6.61 (d, 2H, J = 8.7), 6.58–6.57
(m, 3H), 6.52 (m, 1H), 6.45 (ddd, J = 8.9, 6.7 and
2.4, 4H), 5.23 (2 × t, J = 7, 4H, NH), 4.56
(s, 2H, CH2CO), 3.87 (m, 8H, CH2CF3). 13C{1H} NMR (CD3CN, 101 MHz)
δ 197.1 (CO), 170.5, 169.6 (COOH), 158.3, 154.9, 153.9, 151.1,
150.9, 144.2, 139.6, (all Cq), 136.1 (CH), 133.2 (CH),
130.4 (CH), 130.3 (CH), 128.9 (Cq), 128.3 (Cq), 126.9 (q, J = 282, CF3), 126.8 (CH),
126.1 (CH), 125.7 (CH), 125.6, 111.6, 111.5, 110.0, 109.1 (all Cq), 99.94 (CH), 99.90 (CH), 46.7 (CH2), 45.8 (2
× q, J = 34, CH2CF3). HRMS (ESI-TOF) m/z: [M + H]+ calcd for C50H33F12N4O7 1029.2152; found 1029.2150. m/z: [M + Na]+ calcd for C50H32F12N4O7Na
1051.1972; found 1051.1932. m/z:
[M + 2H]2+ calcd for C50H34F12N4O7 515.1112; found 515.1110. Compound 8c [5(CH)-6(CO)]. 1H NMR (CD3CN, 400 MHz) δ 8.26 (dd,
1H, J = 8.0, 1.4; H-4 [CO]), 8.09 (d, 1H, J = 8.1; H-3 [CO]), 7.88 (d, 1H, J = 1.1;
H-7 [CO]), 7.75 (d, 1H, J = 1.5; H-7 [CH2]), 7.50 (dd, 1H, J = 8.0, 1.6; H-6 [CH2]), 7.08 (d, 1H, J = 7.9, 1.4; H-7 [CH2]), 6.63–6.49 (m, 8H), 6.45 (m, 4H), 5.27 (m, 4H, NH), 4.48
(s, 2H, CH2CO), 3.88 (m, 8H, CH2CF3). 13C{1H} NMR (CD3CN, 101 MHz)
δ 198.0 (CO), 170.4, 169.7 (COOH), 154.7, 154.0, 153.9, 152.9,
151.1, 150.9, 143.8, 138.5 (all Cq), 138.1 (CH), 131.8
(Cq), 130.4 (CH), 130.2 (CH), 128.4 (Cq), 128.3
(Cq), 127.0 (Cq), 126.5 (CH), 126.5 (q, J = 282, CF3), 125.9 (CH), 124.6 (CH), 124.4
(CH), 111.5 (2 × CH), 109.9 (Cq), 109.4 (Cq), 99.9 (CH), 46.2 (CH2), 45.8 (2 × q, J = 45, CH2CF3). 19F NMR (CD3CN, 376 MHz) δ −72.85 (t, J = 9.3), −72.84 (t, J = 9.3). HRMS
(ESI-TOF) m/z: [M + H]+ calcd for C50H33F12N4O7 1029.2152; found 1029.2127. m/z: [M + Na]+ calcd for C50H32F12N4O7Na 1051.1972; found 1051.1970. m/z: [M + 2H]2+ calcd for C50H34F12N4O7 515.1112;
found 515.1109.
A solution
of the mixture containing 8a, 8b, 8c, and 8d (128 mg, 0.125 mmol, 1.0 equiv) and p-toluene sulfonyl azide (42 mg, 0.22 mmol, 1.7 equiv) in
MeCN (2.6 mL; purged with argon) were introduced into an oven-dried
10 mL vial filled with argon. After cooling in an ice bath, a solution
of DBU (36 mg, 0.24 mmol) in MeCN was added dropwise via a syringe
within 10 min. The yellow color changed to cherry red in the course
of DBU addition. The reaction mixture was kept with stirring at 0
°C for 2–3 h and then stirred at rt for 8–20 h.
AcOEt (5 mL) and H2O (5 mL) were added, and the reaction
mixture was stirred for 5 min. The organic phase was separated, the
aqueous phase diluted with H2O (10 mL), and extracted with
ethyl acetate (3 × 15 mL). The combined organic solutions were
washed with H2O (10 mL), and the phases separated. The
combined aqueous solutions (25 mL) were reextracted with ethyl acetate
(2 × 10 mL). The combined organic solutions were shaken with
saturated NaHCO3 (2 × 10 mL), and the combined aqueous
NaHCO3 solutions (20 mL) were reextracted with ethyl acetate
(10 mL). All organic phases were combined and kept for further workup.
The combined aq. phases were neutralized with 10% aq. citric acid
(ca. 20 mL) to pH ∼5 and extracted with ethyl acetate (2 ×
10 mL). All combined organic solutions were washed with aq. NaHCO3 (10 mL), saturated brine (50 mL), dried over MgSO4, and concentrated under exclusion of light and atmospheric oxygen.
The residue was dissolved in a mixture of MeCN (3 mL) and H2O (1 mL) and subjected to preparative RP-HPLC. Knauer column (see
the General remarks section), MeCN/H2O + 50 mM aq. NH4OAc buffer (pH 6.9) = 40:60–70:30%
in 40 min, flow rate 45 mL/min, λ = 510 nm. The fractions containing
individual products were pooled and lyophilized separately. Each isomer
was dissolved in 1,4-dioxane, filtered through a 0.2 μM PTFE
membrane filter, frozen, and lyophilized to yield four isomers as
red solids. 5(N2)-6(CO) (1c), 4.8 mg (3.7%);
6(N2)-6(CO) (1d), 16.0 mg (12%); 6(N2)-5(CO) (1b), 22.5 mg (17%); 5(N2)-5(CO)
(1a), 9.3 mg (7%). In total, 52.6 mg (40%) of diazoketones
were obtained. TLC (RP-18 F254), eluent: MeCN/aq. AcONH4 buffer (50 mM), 7/3. 5(N2)-6(CO) 1c: Rf 0.18; 6(N2)-6(CO) 1d: Rf 0.25; 6(N2)-5(CO) 1b: Rf 0.18; 5(N2)-5(CO), 1a, Rf 0.15. Analytical HPLC (Interchim
column 250 × 4.6 mm, MeCN/aq. 50 mM NH4AcO buffer
= 40:60–70:30 in 30 min, flow rate 1.2 mL/min): tR 27.1 min (1c 5(N2)-6(CO), peak
area 94%); tR = 27.2 min (1d, 6(N2)-6(CO), peak area 96%); tR = 27.7 min (1b, 6(N2)-5(CO), peak
area 96%); tR = 28.0 min (1a, 5(N2)-5(CO), peak area 88%). Analytical HPLC (Phenomenex
Kinetex C18, 5 μM, 250 × 4.6 mm, MeCN/aq. 0.1% HCOOH in
both components = 20:80–80:20 in 20 min, flow rate 1.2 mL/min,
λ = 508 nm): tR = 11.6 min (5(N2)-6(CO), 1c); tR =
12.4 min (6(N2)-6(CO), 1d); tR = 11.8 min (6(N2)-5(CO), 1b); tR = 12.1 min (5(N2)-5(CO), 1a).
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