Literature DB >> 34910247

Mechanisms supporting aminoadenine-based viral DNA genomes.

P A Kaminski1.   

Abstract

Bacteriophage genomes are the richest source of modified nucleobases of any life form. Of these, 2,6 diaminopurine, which pairs with thymine by forming three hydrogen bonds violates Watson and Crick's base pairing. 2,6 diaminopurine initially found in the cyanophage S-2L is more widespread than expected and has also been detected in phage infecting Gram-negative and Gram-positive bacteria. The biosynthetic pathway for aminoadenine containing DNA as well as the exclusion of adenine are now elucidated. This example of a natural deviation from the genetic code represents only one of the possibilities explored by nature and provides a proof of concept for the synthetic biology of non-canonical nucleic acids.
© 2021. The Author(s), under exclusive licence to Springer Nature Switzerland AG.

Entities:  

Keywords:  Adenylosuccinate synthase; Aminoadenine; Bacteriophage; DNA; DNA polymerase; Nucleotide phosphohydrolase

Mesh:

Substances:

Year:  2021        PMID: 34910247     DOI: 10.1007/s00018-021-04055-7

Source DB:  PubMed          Journal:  Cell Mol Life Sci        ISSN: 1420-682X            Impact factor:   9.261


  30 in total

1.  The occurrence of 6-methylaminopurine in deoxyribonucleic acids.

Authors:  D B DUNN; J D SMITH
Journal:  Biochem J       Date:  1958-04       Impact factor: 3.857

Review 2.  DNA methyltransferases and epigenetic regulation in bacteria.

Authors:  Satish Adhikari; Patrick D Curtis
Journal:  FEMS Microbiol Rev       Date:  2016-07-29       Impact factor: 16.408

Review 3.  Biosynthesis and Function of Modified Bases in Bacteria and Their Viruses.

Authors:  Peter Weigele; Elisabeth A Raleigh
Journal:  Chem Rev       Date:  2016-06-20       Impact factor: 60.622

4.  Novel genomic island modifies DNA with 7-deazaguanine derivatives.

Authors:  Jennifer J Thiaville; Stefanie M Kellner; Yifeng Yuan; Geoffrey Hutinet; Patrick C Thiaville; Watthanachai Jumpathong; Susovan Mohapatra; Celine Brochier-Armanet; Andrey V Letarov; Roman Hillebrand; Chanchal K Malik; Carmelo J Rizzo; Peter C Dedon; Valérie de Crécy-Lagard
Journal:  Proc Natl Acad Sci U S A       Date:  2016-02-29       Impact factor: 11.205

5.  2-aminoadenine is an adenine substituting for a base in S-2L cyanophage DNA.

Authors:  M D Kirnos; I Y Khudyakov; N I Alexandrushkina; B F Vanyushin
Journal:  Nature       Date:  1977-11-24       Impact factor: 49.962

6.  Purification and characterization of the unusual deoxynucleoside, alpha-N-(9-beta-D-2'-deoxyribofuranosylpurin-6-yl)glycinamide, specified by the phage Mu modification function.

Authors:  D Swinton; S Hattman; P F Crain; C S Cheng; D L Smith; J A McCloskey
Journal:  Proc Natl Acad Sci U S A       Date:  1983-12       Impact factor: 11.205

7.  Methylated guanine derivative as a minor base in the DNA of phage DDVI Shigella disenteriae.

Authors:  I I Nikolskaya; N G Lopatina; S S Debov
Journal:  Biochim Biophys Acta       Date:  1976-06-18

8.  Deoxyinosine and 7-Deaza-2-Deoxyguanosine as Carriers of Genetic Information in the DNA of Campylobacter Viruses.

Authors:  Clay S Crippen; Yan-Jiun Lee; Geoffrey Hutinet; Asif Shajahan; Jessica C Sacher; Parastoo Azadi; Valérie de Crécy-Lagard; Peter R Weigele; Christine M Szymanski
Journal:  J Virol       Date:  2019-11-13       Impact factor: 5.103

9.  Development of a genome-targeting mutator for the adaptive evolution of microbial cells.

Authors:  Ga-Eul Eom; Hyunbin Lee; Seokhee Kim
Journal:  Nucleic Acids Res       Date:  2022-04-22       Impact factor: 16.971

10.  Identification and biosynthesis of thymidine hypermodifications in the genomic DNA of widespread bacterial viruses.

Authors:  Yan-Jiun Lee; Nan Dai; Shannon E Walsh; Stephanie Müller; Morgan E Fraser; Kathryn M Kauffman; Chudi Guan; Ivan R Corrêa; Peter R Weigele
Journal:  Proc Natl Acad Sci U S A       Date:  2018-03-19       Impact factor: 11.205

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.