Literature DB >> 27476077

DNA methyltransferases and epigenetic regulation in bacteria.

Satish Adhikari1, Patrick D Curtis2.   

Abstract

Epigenetics is a change in gene expression that is heritable without a change in DNA sequence itself. This phenomenon is well studied in eukaryotes, particularly in humans for its role in cellular differentiation, X chromosome inactivation and diseases like cancer. However, comparatively little is known about epigenetic regulation in bacteria. Bacterial epigenetics is mainly present in the form of DNA methylation where DNA methyltransferases add methyl groups to nucleotides. This review focuses on two methyltransferases well characterized for their roles in gene regulation: Dam and CcrM. Dam methyltransferase in Escherichia coli is important for expression of certain genes such as the pap operon, as well as other cellular processes like DNA replication initiation and DNA repair. In Caulobacter crescentus and other Alphaproteobacteria, the methyltransferase CcrM is cell cycle regulated and is involved in the cell-cycle-dependent regulation of several genes. The diversity of regulatory targets as well as regulatory mechanisms suggests that gene regulation by methylation could be a widespread and potent method of regulation in bacteria. © FEMS 2016. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Entities:  

Keywords:  CcrM; DNA methyltransferases; Dam; bacterial epigenetics; epigenetics

Mesh:

Substances:

Year:  2016        PMID: 27476077     DOI: 10.1093/femsre/fuw023

Source DB:  PubMed          Journal:  FEMS Microbiol Rev        ISSN: 0168-6445            Impact factor:   16.408


  43 in total

1.  Effect of dC → d(m5C) substitutions on the folding of intramolecular triplexes with mixed TAT and C+GC base triplets.

Authors:  Carolyn E Carr; Rajkumar Ganugula; Ronald Shikiya; Ana Maria Soto; Luis A Marky
Journal:  Biochimie       Date:  2017-12-24       Impact factor: 4.079

Review 2.  Antibiotic Resistance and Epigenetics: More to It than Meets the Eye.

Authors:  Dipannita Ghosh; Balaji Veeraraghavan; Ravikrishnan Elangovan; Perumal Vivekanandan
Journal:  Antimicrob Agents Chemother       Date:  2020-01-27       Impact factor: 5.191

3.  Kinetic and catalytic properties of M.HpyAXVII, a phase-variable DNA methyltransferase from Helicobacter pylori.

Authors:  Yedu Prasad; Ritesh Kumar; Awanish Kumar Chaudhary; Rajkumar Dhanaraju; Soneya Majumdar; Desirazu N Rao
Journal:  J Biol Chem       Date:  2018-11-26       Impact factor: 5.157

4.  The highly specific, cell cycle-regulated methyltransferase from Caulobacter crescentus relies on a novel DNA recognition mechanism.

Authors:  Norbert O Reich; Eric Dang; Martin Kurnik; Sarath Pathuri; Clayton B Woodcock
Journal:  J Biol Chem       Date:  2018-10-15       Impact factor: 5.157

Review 5.  Diversity, versatility and complexity of bacterial gene regulation mechanisms: opportunities and drawbacks for applications in synthetic biology.

Authors:  Indra Bervoets; Daniel Charlier
Journal:  FEMS Microbiol Rev       Date:  2019-05-01       Impact factor: 16.408

6.  Computational modeling of unphosphorylated CtrA:Cori binding in the Caulobacter cell cycle.

Authors:  Bronson R Weston; John J Tyson; Yang Cao
Journal:  iScience       Date:  2021-11-10

Review 7.  Phasevarions of Bacterial Pathogens: Methylomics Sheds New Light on Old Enemies.

Authors:  John M Atack; Aimee Tan; Lauren O Bakaletz; Michael P Jennings; Kate L Seib
Journal:  Trends Microbiol       Date:  2018-02-13       Impact factor: 17.079

8.  Epigenetic competition reveals density-dependent regulation and target site plasticity of phosphorothioate epigenetics in bacteria.

Authors:  Xiaolin Wu; Bo Cao; Patricia Aquino; Tsu-Pei Chiu; Chao Chen; Susu Jiang; Zixin Deng; Shi Chen; Remo Rohs; Lianrong Wang; James E Galagan; Peter C Dedon
Journal:  Proc Natl Acad Sci U S A       Date:  2020-06-09       Impact factor: 11.205

9.  The structure of the Thermococcus gammatolerans McrB N-terminal domain reveals a new mode of substrate recognition and specificity among McrB homologs.

Authors:  Christopher J Hosford; Anthony Q Bui; Joshua S Chappie
Journal:  J Biol Chem       Date:  2019-12-10       Impact factor: 5.157

Review 10.  Novel Identification of Bacterial Epigenetic Regulations Would Benefit From a Better Exploitation of Methylomic Data.

Authors:  Amaury Payelleville; Julien Brillard
Journal:  Front Microbiol       Date:  2021-05-14       Impact factor: 5.640

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