Literature DB >> 3490654

Genomic sequence for human prointerleukin 1 beta: possible evolution from a reverse transcribed prointerleukin 1 alpha gene.

B D Clark, K L Collins, M S Gandy, A C Webb, P E Auron.   

Abstract

We have isolated the human prointerleukin 1 (proIL-1) beta gene from leukocyte and fetal liver libraries. The nucleotide sequence and its gene organization reveals that the proIL-1 beta gene is composed of seven exons with a primary transcription product length of 7,008 nucleotides. The exon sequence agrees well with that of the human proIL-1 beta cDNA. Features of interest within the transcriptional unit include positioned TATA, CAT, and poly-adenylation signals for gene regulation, as well as the signatures of gene duplication via retrotransposition in the form of flanking direct repeats and a genomic poly A tail. The genomic organization of the proIL-1 beta gene with respect to the number and position of exon boundaries is strikingly similar to that of the recently reported human proIL-1 alpha gene. Therefore, we hypothesize that the proIL-1 beta may have arisen by a reverse transcriptase mediated duplication of the related alpha gene.

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Year:  1986        PMID: 3490654      PMCID: PMC311823          DOI: 10.1093/nar/14.20.7897

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  48 in total

1.  Detection of specific sequences among DNA fragments separated by gel electrophoresis.

Authors:  E M Southern
Journal:  J Mol Biol       Date:  1975-11-05       Impact factor: 5.469

2.  Expression of biologically active human interleukin 1 subpeptides by transfected simian COS cells.

Authors:  L J Rosenwasser; A C Webb; B D Clark; S Irie; L Chang; C A Dinarello; L Gehrke; S M Wolff; A Rich; P E Auron
Journal:  Proc Natl Acad Sci U S A       Date:  1986-07       Impact factor: 11.205

Review 3.  Splicing of messenger RNA precursors.

Authors:  R A Padgett; P J Grabowski; M M Konarska; S Seiler; P A Sharp
Journal:  Annu Rev Biochem       Date:  1986       Impact factor: 23.643

4.  Screening lambdagt recombinant clones by hybridization to single plaques in situ.

Authors:  W D Benton; R W Davis
Journal:  Science       Date:  1977-04-08       Impact factor: 47.728

5.  3' non-coding region sequences in eukaryotic messenger RNA.

Authors:  N J Proudfoot; G G Brownlee
Journal:  Nature       Date:  1976-09-16       Impact factor: 49.962

6.  Computer methods to locate signals in nucleic acid sequences.

Authors:  R Staden
Journal:  Nucleic Acids Res       Date:  1984-01-11       Impact factor: 16.971

7.  Interleukin-1 gene (IL1) assigned to long arm of human chromosome 2.

Authors:  A C Webb; K L Collins; P E Auron; R L Eddy; H Nakai; M G Byers; L L Haley; W M Henry; T B Shows
Journal:  Lymphokine Res       Date:  1986

8.  Similarity between the interleukin 1 receptors on a murine T-lymphoma cell line and on a murine fibroblast cell line.

Authors:  S K Dower; S M Call; S Gillis; D L Urdal
Journal:  Proc Natl Acad Sci U S A       Date:  1986-02       Impact factor: 11.205

9.  Fish lymphocytes respond to human IL-1.

Authors:  B A Hamby; E M Huggins; L B Lachman; C A Dinarello; M M Sigel
Journal:  Lymphokine Res       Date:  1986

10.  Complete nucleotide sequence of the gene for human interleukin 1 alpha.

Authors:  Y Furutani; M Notake; T Fukui; M Ohue; H Nomura; M Yamada; S Nakamura
Journal:  Nucleic Acids Res       Date:  1986-04-25       Impact factor: 16.971

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  44 in total

1.  Central action sites of interleukin-1 beta for inducing fever in rabbits.

Authors:  N Murakami; Y Sakata; T Watanabe
Journal:  J Physiol       Date:  1990-09       Impact factor: 5.182

Review 2.  Reverse transcriptase: mediator of genomic plasticity.

Authors:  J Brosius; H Tiedge
Journal:  Virus Genes       Date:  1995       Impact factor: 2.332

3.  The testis-specific phosphoglycerate kinase gene pgk-2 is a recruited retroposon.

Authors:  P H Boer; C N Adra; Y F Lau; M W McBurney
Journal:  Mol Cell Biol       Date:  1987-09       Impact factor: 4.272

4.  The 5' splice site: phylogenetic evolution and variable geometry of association with U1RNA.

Authors:  M Jacob; H Gallinaro
Journal:  Nucleic Acids Res       Date:  1989-03-25       Impact factor: 16.971

5.  Expression of membrane interleukin 1 by fibroblasts transfected with murine pro-interleukin 1 alpha cDNA.

Authors:  R C Fuhlbrigge; S M Fine; E R Unanue; D D Chaplin
Journal:  Proc Natl Acad Sci U S A       Date:  1988-08       Impact factor: 11.205

Review 6.  Interleukin-1 and the effects of cyclooxygenase inhibitors on its biological activities.

Authors:  C A Dinarello
Journal:  Bull N Y Acad Med       Date:  1989-01

7.  Regulation of the interleukin-1 beta (IL-1 beta) gene by mycobacterial components and lipopolysaccharide is mediated by two nuclear factor-IL6 motifs.

Authors:  Y Zhang; W N Rom
Journal:  Mol Cell Biol       Date:  1993-06       Impact factor: 4.272

8.  Cell-free pool of CD14 mediates activation of transcription factor NF-kappa B by lipopolysaccharide in human endothelial cells.

Authors:  M A Read; S R Cordle; R A Veach; C D Carlisle; J Hawiger
Journal:  Proc Natl Acad Sci U S A       Date:  1993-11-01       Impact factor: 11.205

9.  Isolation and characterization of the CRIPTO autosomal gene and its X-linked related sequence.

Authors:  R Dono; N Montuori; M Rocchi; L De Ponti-Zilli; A Ciccodicola; M G Persico
Journal:  Am J Hum Genet       Date:  1991-09       Impact factor: 11.025

10.  The human prointerleukin 1 beta gene requires DNA sequences both proximal and distal to the transcription start site for tissue-specific induction.

Authors:  F Shirakawa; K Saito; C A Bonagura; D L Galson; M J Fenton; A C Webb; P E Auron
Journal:  Mol Cell Biol       Date:  1993-03       Impact factor: 4.272

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