Literature DB >> 34902329

Isothermal titration calorimetry of membrane protein interactions: FNR and the cytochrome b6f complex.

Stanislav D Zakharov1, Sergei Savikhin2, Yuko Misumi2, Genji Kurisu3, William A Cramer4.   

Abstract

Ferredoxin-NADP+ reductase (FNR) was previously inferred to bind to the cytochrome b6f complex in the electron transport chain of oxygenic photosynthesis. In the present study, this inference has been examined through analysis of the thermodynamics of the interaction between FNR and the b6f complex. Isothermal titration calorimetry (ITC) was used to characterize the physical interaction of FNR with b6f complex derived from two plant sources (Spinacia oleracea and Zea maize). ITC did not detect a significant interaction of FNR with the b6f complex in detergent solution nor with the complex reconstituted in liposomes. A previous inference of a small amplitude but defined FNR-b6f interaction is explained by FNR interaction with micelles of the undecyl β-D maltoside (UDM) detergent micelles used to purify b6f. Circular dichroism, employed to analyze the effect of detergent on the FNR structure, did not reveal significant changes in secondary or tertiary structures of FNR domains in the presence of UDM detergent. However, thermodynamic analysis implied a significant decrease in an interaction between the N-terminal FAD-binding and C-terminal NADP+-binding domains of FNR caused by detergent. The enthalpy, ΔHo, and the entropy, ΔSo, associated with FNR unfolding decreased four-fold in the presence of 1 mM UDM at pH 6.5. In addition to the conclusion regarding the absence of a binding interaction of significant amplitude between FNR and the b6f complex, these studies provide a precedent for consideration of significant background protein-detergent interactions in ITC analyses involving integral membrane proteins.
Copyright © 2021 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2021        PMID: 34902329      PMCID: PMC8790201          DOI: 10.1016/j.bpj.2021.12.014

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  39 in total

1.  A thermodynamic definition of protein domains.

Authors:  Lauren L Porter; George D Rose
Journal:  Proc Natl Acad Sci U S A       Date:  2012-05-25       Impact factor: 11.205

2.  Measuring Multivalent Binding Interactions by Isothermal Titration Calorimetry.

Authors:  Tarun K Dam; Melanie L Talaga; Ni Fan; Curtis F Brewer
Journal:  Methods Enzymol       Date:  2015-09-08       Impact factor: 1.600

3.  Using circular dichroism collected as a function of temperature to determine the thermodynamics of protein unfolding and binding interactions.

Authors:  Norma J Greenfield
Journal:  Nat Protoc       Date:  2006       Impact factor: 13.491

4.  Enthalpy and heat capacity changes for the proton dissociation of various buffer components in 0.1 M potassium chloride.

Authors:  H Fukada; K Takahashi
Journal:  Proteins       Date:  1998-11-01

5.  Binding of ferredoxin NADP+ oxidoreductase (FNR) to plant photosystem I.

Authors:  Pini Marco; Tamar Elman; Iftach Yacoby
Journal:  Biochim Biophys Acta Bioenerg       Date:  2019-07-20       Impact factor: 3.991

6.  Extraction of Thermodynamic Parameters of Protein Unfolding Using Parallelized Differential Scanning Fluorimetry.

Authors:  Thaiesha A Wright; Jamie M Stewart; Richard C Page; Dominik Konkolewicz
Journal:  J Phys Chem Lett       Date:  2017-01-12       Impact factor: 6.475

7.  Purification and crystallization of the cyanobacterial cytochrome b6f complex.

Authors:  Danas Baniulis; Huamin Zhang; Taisiya Zakharova; S Saif Hasan; William A Cramer
Journal:  Methods Mol Biol       Date:  2011

8.  Internal lipid architecture of the hetero-oligomeric cytochrome b6f complex.

Authors:  S Saif Hasan; William A Cramer
Journal:  Structure       Date:  2014-06-12       Impact factor: 5.006

9.  Structure of the cytochrome b6f complex: quinone analogue inhibitors as ligands of heme cn.

Authors:  E Yamashita; H Zhang; W A Cramer
Journal:  J Mol Biol       Date:  2007-04-12       Impact factor: 5.469

10.  Refined crystal structure of spinach ferredoxin reductase at 1.7 A resolution: oxidized, reduced and 2'-phospho-5'-AMP bound states.

Authors:  C M Bruns; P A Karplus
Journal:  J Mol Biol       Date:  1995-03-17       Impact factor: 5.469

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  1 in total

1.  Structure of cyanobacterial photosystem I complexed with ferredoxin at 1.97 Å resolution.

Authors:  Jiannan Li; Noriyuki Hamaoka; Fumiaki Makino; Akihiro Kawamoto; Yuxi Lin; Matthias Rögner; Marc M Nowaczyk; Young-Ho Lee; Keiichi Namba; Christoph Gerle; Genji Kurisu
Journal:  Commun Biol       Date:  2022-09-12
  1 in total

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