Literature DB >> 26794351

Measuring Multivalent Binding Interactions by Isothermal Titration Calorimetry.

Tarun K Dam1, Melanie L Talaga2, Ni Fan2, Curtis F Brewer3.   

Abstract

Multivalent glycoconjugate-protein interactions are central to many important biological processes. Isothermal titration calorimetry (ITC) can potentially reveal the molecular and thermodynamic basis of such interactions. However, calorimetric investigation of multivalency is challenging. Binding of multivalent glycoconjugates to proteins (lectins) often leads to a stoichiometry-dependent precipitation process due to noncovalent cross-linking between the reactants. Precipitation during ITC titration severely affects the quality of the baseline as well as the signals. Hence, the resulting thermodynamic data are not dependable. We have made some modifications to address this problem and successfully studied multivalent glycoconjugate binding to lectins. We have also modified the Hill plot equation to analyze high quality ITC raw data obtained from multivalent binding. As described in this chapter, ITC-driven thermodynamic parameters and Hill plot analysis of ITC raw data can provide valuable information about the molecular mechanism of multivalent lectin-glycoconjugate interactions. The methods described herein revealed (i) the importance of functional valence of multivalent glycoconjugates, (ii) that favorable entropic effects contribute to the enhanced affinities associated with multivalent binding, (iii) that with the progression of lectin binding, the microscopic affinities of the glycan epitopes of a multivalent glycoconjugate decrease (negative cooperativity), (iv) that lectin binding to multivalent glycoconjugates, especially to mucins, involves internal diffusion jumps, (bind and jump) and (v) that scaffolds of glycoconjugates influence their entropy of binding.
© 2016 Elsevier Inc. All rights reserved.

Keywords:  Binding; Calorimetry; Enthalpy; Entropy; Glycoprotein; Lectin; Mucin; Multivalency; Scaffold; Stoichiometry

Mesh:

Year:  2015        PMID: 26794351     DOI: 10.1016/bs.mie.2015.08.013

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN: 0076-6879            Impact factor:   1.600


  8 in total

1.  Chemical and Biophysical Approaches for Complete Characterization of Lectin-Carbohydrate Interactions.

Authors:  Sabrina Lusvarghi; Rodolfo Ghirlando; Jack R Davison; Carole A Bewley
Journal:  Methods Enzymol       Date:  2017-07-23       Impact factor: 1.600

2.  Isothermal titration calorimetry of membrane protein interactions: FNR and the cytochrome b6f complex.

Authors:  Stanislav D Zakharov; Sergei Savikhin; Yuko Misumi; Genji Kurisu; William A Cramer
Journal:  Biophys J       Date:  2021-12-11       Impact factor: 4.033

3.  Exploring Glycan Binding Specificity of Odorranalectin by Alanine Scanning Library.

Authors:  YashoNandini Singh; Predrag Cudic; Maré Cudic
Journal:  European J Org Chem       Date:  2022-04-22

4.  Glucan Binding Protein C of Streptococcus mutans Mediates both Sucrose-Independent and Sucrose-Dependent Adherence.

Authors:  Joshua L Mieher; Matthew R Larson; Norbert Schormann; Sangeetha Purushotham; Ren Wu; Kanagalaghatta R Rajashankar; Hui Wu; Champion Deivanayagam
Journal:  Infect Immun       Date:  2018-06-21       Impact factor: 3.441

Review 5.  Recent Advances in the Chemical Biology of N-Glycans.

Authors:  Asuka Shirakawa; Yoshiyuki Manabe; Koichi Fukase
Journal:  Molecules       Date:  2021-02-16       Impact factor: 4.411

Review 6.  Structural Considerations for Building Synthetic Glycoconjugates as Inhibitors for Pseudomonas aeruginosa Lectins.

Authors:  Karolina Wojtczak; Joseph P Byrne
Journal:  ChemMedChem       Date:  2022-05-03       Impact factor: 3.540

Review 7.  Novel NMR Avenues to Explore the Conformation and Interactions of Glycans.

Authors:  Pablo Valverde; Jon I Quintana; Jose I Santos; Ana Ardá; Jesús Jiménez-Barbero
Journal:  ACS Omega       Date:  2019-08-19

Review 8.  Biophysical Analyses for Probing Glycan-Protein Interactions.

Authors:  Masamichi Nagae; Yoshiki Yamaguchi
Journal:  Adv Exp Med Biol       Date:  2018       Impact factor: 2.622

  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.