Literature DB >> 34901190

Next-Generation Sequencing-Based Genetic Diagnostic Strategies of Inherited Kidney Diseases.

Jiahui Zhang1,2, Changming Zhang3,4, Erzhi Gao3, Qing Zhou1,2.   

Abstract

BACKGROUND: At least 10% of adults and most of the children who receive renal replacement therapy have inherited kidney diseases. These disorders substantially decrease their life quality and have a large effect on the health-care system. Multisystem complications, with typical challenges for rare disorders, including variable phenotypes and fragmented clinical and biological data, make genetic diagnosis of inherited kidney disorders difficult. In current clinical practice, genetic diagnosis is important for clinical management, estimating disease development, and applying personal treatment for patients.
SUMMARY: Inherited kidney diseases comprise hundreds of different disorders. Here, we have summarized various monogenic kidney disorders. These disorders are caused by mutations in genes coding for a wide range of proteins including receptors, channels/transporters, enzymes, transcription factors, and structural components that might also have a role in extrarenal organs (bone, eyes, brain, skin, ear, etc.). With the development of next-generation sequencing technologies, genetic testing and analysis become more accessible, promoting our understanding of the pathophysiologic mechanisms of inherited kidney diseases. However, challenges exist in interpreting the significance of genetic variants and translating them to guide clinical managements. Alport syndrome is chosen as an example to introduce the practical application of genetic testing and diagnosis on inherited kidney diseases, considering its clinical features, genetic backgrounds, and genetic testing for making a genetic diagnosis. KEY MESSAGES: Recent advances in genomics have highlighted the complexity of Mendelian disorders, which is due to allelic heterogeneity (distinct mutations in the same gene produce distinct phenotypes), locus heterogeneity (mutations in distinct genes result in similar phenotypes), reduced penetrance, variable expressivity, modifier genes, and/or environmental factors. Implementation of precision medicine in clinical nephrology can improve the clinical diagnostic rate and treatment efficiency of kidney diseases, which requires a good understanding of genetics for nephrologists.
Copyright © 2021 by S. Karger AG, Basel.

Entities:  

Keywords:  Genetic diagnosis; Inherited kidney diseases; Next-generation sequencing; Variants interpretation

Year:  2021        PMID: 34901190      PMCID: PMC8613547          DOI: 10.1159/000519095

Source DB:  PubMed          Journal:  Kidney Dis (Basel)        ISSN: 2296-9357


  64 in total

Review 1.  SALL1 mutations in Townes-Brocks syndrome and related disorders.

Authors:  J Kohlhase
Journal:  Hum Mutat       Date:  2000-12       Impact factor: 4.878

2.  Autosomal recessive polycystic kidney disease (ARPKD).

Authors:  Klaus Zerres; Sabine Rudnik-Schöneborn; Jan Senderek; Thomas Eggermann; Carsten Bergmann
Journal:  J Nephrol       Date:  2003 May-Jun       Impact factor: 3.902

Review 3.  Autosomal dominant polycystic kidney disease.

Authors:  Emilie Cornec-Le Gall; Ahsan Alam; Ronald D Perrone
Journal:  Lancet       Date:  2019-02-25       Impact factor: 79.321

4.  Mutations of CTNS causing intermediate cystinosis.

Authors:  J Thoene; R Lemons; Y Anikster; J Mullet; K Paelicke; C Lucero; W Gahl; J Schneider; S G Shu; H T Campbell
Journal:  Mol Genet Metab       Date:  1999-08       Impact factor: 4.797

5.  Mapping the NPHP-JBTS-MKS protein network reveals ciliopathy disease genes and pathways.

Authors:  Liyun Sang; Julie J Miller; Kevin C Corbit; Rachel H Giles; Matthew J Brauer; Edgar A Otto; Lisa M Baye; Xiaohui Wen; Suzie J Scales; Mandy Kwong; Erik G Huntzicker; Mindan K Sfakianos; Wendy Sandoval; J Fernando Bazan; Priya Kulkarni; Francesc R Garcia-Gonzalo; Allen D Seol; John F O'Toole; Susanne Held; Heiko M Reutter; William S Lane; Muhammad Arshad Rafiq; Abdul Noor; Muhammad Ansar; Akella Radha Rama Devi; Val C Sheffield; Diane C Slusarski; John B Vincent; Daniel A Doherty; Friedhelm Hildebrandt; Jeremy F Reiter; Peter K Jackson
Journal:  Cell       Date:  2011-05-13       Impact factor: 41.582

6.  High mutation detection rate in the COL4A5 collagen gene in suspected Alport syndrome using PCR and direct DNA sequencing.

Authors:  P Martin; N Heiskari; J Zhou; A Leinonen; T Tumelius; J M Hertz; D Barker; M Gregory; C Atkin; U Styrkarsdottir; H Neumann; J Springate; T Shows; E Pettersson; K Tryggvason
Journal:  J Am Soc Nephrol       Date:  1998-12       Impact factor: 10.121

7.  Incompletely penetrant PKD1 alleles suggest a role for gene dosage in cyst initiation in polycystic kidney disease.

Authors:  Sandro Rossetti; Vickie J Kubly; Mark B Consugar; Katharina Hopp; Sushmita Roy; Sharon W Horsley; Dominique Chauveau; Lesley Rees; T Martin Barratt; William G van't Hoff; Patrick Niaudet; W Patrick Niaudet; Vicente E Torres; Peter C Harris
Journal:  Kidney Int       Date:  2009-01-21       Impact factor: 10.612

8.  Evidence of digenic inheritance in Alport syndrome.

Authors:  Maria Antonietta Mencarelli; Laurence Heidet; Helen Storey; Michel van Geel; Bertrand Knebelmann; Chiara Fallerini; Nunzia Miglietti; Maria Fatima Antonucci; Francesco Cetta; John A Sayer; Arthur van den Wijngaard; Shu Yau; Francesca Mari; Mirella Bruttini; Francesca Ariani; Karin Dahan; Bert Smeets; Corinne Antignac; Frances Flinter; Alessandra Renieri
Journal:  J Med Genet       Date:  2015-01-09       Impact factor: 6.318

9.  Association of PAX2 and Other Gene Mutations with the Clinical Manifestations of Renal Coloboma Syndrome.

Authors:  Toshiya Okumura; Kengo Furuichi; Tomomi Higashide; Mayumi Sakurai; Shin-Ichi Hashimoto; Yasuyuki Shinozaki; Akinori Hara; Yasunori Iwata; Norihiko Sakai; Kazuhisa Sugiyama; Shuichi Kaneko; Takashi Wada
Journal:  PLoS One       Date:  2015-11-16       Impact factor: 3.240

View more
  1 in total

Review 1.  Clinical Characteristics, Renal Involvement, and Therapeutic Options of Pediatric Patients With Fabry Disease.

Authors:  Carmen Muntean; Iuliana Magdalena Starcea; Cristina Stoica; Claudia Banescu
Journal:  Front Pediatr       Date:  2022-06-01       Impact factor: 3.569

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.