| Literature DB >> 34899835 |
Haoxin Peng1,2, Xiangrong Wu1,2, Yaokai Wen3,4, Yiyuan Ao1,2, Yutian Li1, Wenhui Guan1, Jinsheng Lin1, Caichen Li1, Hengrui Liang1, Jianxing He1, Wenhua Liang1,5.
Abstract
Leisure sedentary behaviors (LSB) are widespread, and observational studies have provided emerging evidence that LSB play a role in the development of lung cancer (LC). However, the causal inference between LSB and LC remains unknown.Entities:
Keywords: Mendelian randomization; cancer prevention; leisure sedentary behaviors; lung cancer; single-neucleotide polymorphism
Year: 2021 PMID: 34899835 PMCID: PMC8651878 DOI: 10.3389/fgene.2021.742718
Source DB: PubMed Journal: Front Genet ISSN: 1664-8021 Impact factor: 4.599
FIGURE 1Illustrative diagram of multivariable Mendelian randomization assumptions. Taking the exposure television watching (X2) as an example, the direct effect of television watching on lung cancer is the effect television watching has on lung cancer not via any other exposure variables, which is equal to βX2Z. The total effect of television watching on lung cancer is the effect of television watching on lung cancer directly plus the effect of television watching on lung cancer via education and BMI, which is equal to βX2Z + αX2YβYZ.
Details of epidemiological individual-level data of lung cancer from the International Lung and Cancer Consortium (ILCCO) included in Mendelian randomization analyses.
| Trait | First author | Consortium | Number of cases | Number of controls | Proportion of cases | Population |
|---|---|---|---|---|---|---|
| Lung cancer | Y Wang | ILCCO | 11,348 | 15,861 | 0.42 | European |
| Lung adenocarcinoma | Y Wang | ILCCO | 3,422 | 14,894 | 0.23 | European |
| Squamous cell lung cancer | Y Wang | ILCCO | 3,275 | 15,038 | 0.22 | European |
Details of studies included in the Mendelian randomization analysis for potential mediators between leisure sedentary behaviors and lung cancer.
| Traits | First author | Consortium | Study participants | Year | PubMed ID |
|---|---|---|---|---|---|
| Former | Furberg | TAG | 41,969 | 2010 | 20418890 |
| Ever | Furberg | TAG | 74,035 | 2010 | 20418890 |
| Cigarettes smoked per day | Furberg | TAG | 68,028 | 2010 | 20418890 |
| Alcohol drinker status: previous | Neale | Neale Lab | 336,965 | 2017 | 10894596 |
| Alcohol drinker status: never | Neale | Neale Lab | 336,965 | 2017 | 10894596 |
TAG, Tobacco and Genetics consortium.
Power calculation for Mendelian randomization analysis.
| Exposure/genetic instruments | R-square (of variance in phenotype) | Number of subjects | Number of cases | Proportion of cases | Observational OR |
| Power |
|---|---|---|---|---|---|---|---|
| Television watching/152 SNPs | 0.161 | 400,364 | 12,136 | 0.030 | 1.20 | 76,260.81 | 1.00 |
| Computer use/37 SNPs | 0.093 | 397,641 | 12,085 | 0.030 | 0.97 | 40,773.45 | 0.17 |
| Driving/four SNPs | 0.044 | 397,315 | 12,081 | 0.030 | 1.03 | 18,287.46 | 0.10 |
FIGURE 2Summary of Mendelian randomization estimates of leisure sedentary behaviors on the risk of lung cancer: (A) is for watching television, (B) is for computer use, and (C) is for driving.
FIGURE 3Scatter plot of the effect size of each single-nucleotide polymorphism on leisure television watching (A), leisure computer use (B), and leisure driving (C) and lung cancer risk using Mendelian randomization approaches, including inverse variance-weighted, weighted median, and MR-Egger, respectively.
MR-Egger regression and heterogeneity analysis of the correlations between television watching, computer use, driving, and lung cancer risk.
| Exposure | Heterogeneity | MR-Egger regression |
| ||
|---|---|---|---|---|---|
| MR-Egger | Inverse variance-weighted | Intercept | Intercept | ||
| TV watching | 0.0391 | 0.0453 | 0.0008 | 0.9405 | 20.34% |
| TV watching (excluding pleiotropic single-nucleotide polymorphisms, SNPs) | 0.0528 | 0.0610 | 0.0048 | 0.7217 | 22.01% |
| TV watching (excluding pleiotropic education SNPs) | 0.0337 | 0.0394 | 0.0020 | 0.8708 | 22.19% |
| TV watching (adjusted for education) | 0.0295 | 0.0344 | 0.0011 | 0.9238 | 21.00% |
| TV watching (adjusted for body mass index) | 0.0492 | 0.0576 | 0.0010 | 0.9332 | 21.85% |
| Computer use | 0.3659 | 0.3559 | −0.0388 | 0.2968 | 7.81% |
| Computer use (excluding pleiotropic SNPs) | 0.9439 | 0.9168 | −0.0437 | 0.2298 | 0.00% |
| Computer use (excluding pleiotropic education SNPs) | 0.9095 | 0.8804 | −0.0431 | 0.2322 | 0.00% |
| Computer use (adjusted for education) | 0.2623 | 0.2549 | −0.0403 | 0.3154 | 15.97% |
| Driving | 0.2274 | 0.3720 | 0.0307 | 0.7679 | 4.17% |
| Driving (excluding pleiotropic SNPs) | NA | 0.1200 | NA | NA | 58.64% |
| Driving (excluding pleiotropic education SNPs) | NA | 0.2274 | NA | NA | 32.47% |
| Driving (adjusted for education) | 0.1200 | 0.2961 | 0.0102 | 0.9476 | 17.84% |
FIGURE 4Causal effects from genetically predisposed prolonged leisure sedentary behaviors and mediators.
Causal effects from mediators to lung cancer and subtypes.
| Exposures | Lung cancer | Squamous cell lung cancer | Lung adenocarcinoma | |||
|---|---|---|---|---|---|---|
| Causal effect (95% CI) |
| Causal effect (95% CI) |
| Causal effect (95% CI) |
| |
| Ever | 3.82 (1.69, 8.61) | 0.0013 | 4.93 (1.55, 15.68) | 0.0068 | 5.46 (1.36, 21.96) | 0.0168 |
| Cigarettes smoked per day | 2.63 (1.88, 3.68) | <0.001 | 3.10 (2.08, 4.63) | <0.001 | 2.49 (1.82, 3.41) | <0.001 |